FC923094

Overview
NameFC923094
Unique NameFC923094
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10680 contig Ccv1_Contig10680:109..843. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER5_ARATH (Peroxidase 5 OS=Arabidopsis thaliana GN=PER5 PE=2 SV=2)

HSP 1 Score: 154.836 bits (390), Expect = 4.206e-37
Identity = 87/205 (42.44%), Postives = 120/205 (58.54%), Query Frame = 3
Query:  123 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGST---SEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDS----KTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKRHAP 716
            LS TFYDQSC    S +R  ++ A+ ++  +AA LIR+HFHDCFV GCD S+LLEG++   SE++A PN        + +D  ++ V K C  +VSCADI+A+AARD+    GGP + + +GRRDS    K  A    LP        +   F +K  N R+ VALSG HT+G + C  F +RLY +    +D  FA+  KR  P
Sbjct:   26 LSPTFYDQSCRNALSKIRSSVRTAIARERRMAASLIRMHFHDCFVHGCDASILLEGTSTIESERDALPNFK-SVRGFEVIDKAKSEVEKVCPGIVSCADIIAVAARDASEYVGGPKWAVKVGRRDSTAAFKALANSGELPGFKDTLDQLSGLFSKKGLNTRDLVALSGAHTIGQSQCFLFRDRLY-ENSSDIDAGFASTRKRRCP 228          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER33_ARATH (Peroxidase 33 OS=Arabidopsis thaliana GN=PER33 PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.493e-37
Identity = 87/209 (41.63%), Postives = 123/209 (58.85%), Query Frame = 3
Query:  123 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKF--VDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDS-KTFATV--VNLPSPFSNTTVILNDFREKTFN-ARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKRHAP 716
            L+ TFYD SCP + +IVR  I N L+ D  +A  ++R+HFHDCFV GCD S+LL+ +TS +  +  L     A  F  +D ++A V + C R VSCAD+L +AA+ SV L+GGP++ +PLGRRDS + F  +   NLP+PF     +  +F+    +   + VALSG HT G   C    +RLY        DPTL+ T+   L+   P
Sbjct:   33 LTPTFYDTSCPTVTNIVRDTIVNELRSDPRIAGSILRLHFHDCFVNGCDASILLDNTTSFRTEKDALGNANSARGFPVIDRMKAAVERACPRTVSCADMLTIAAQQSVTLAGGPSWKVPLGRRDSLQAFLDLANANLPAPFFTLPQLKANFKNVGLDRPSDLVALSGAHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGQCP 241          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER54_ARATH (Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 7.175e-37
Identity = 86/209 (41.15%), Postives = 120/209 (57.42%), Query Frame = 3
Query:  123 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGST---SEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKT---FATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKRHAP 716
            L+ TFY  +CP   +IVR  IQ AL+ D  +   LIR+HFHDCFV GCDGS+LL+ ++   SE+NA  N +  +     VD ++  +   C  +VSC+DILALA+  SV+L+GGP++ + LGRRD  T        +LPSPF     I + F        + V+LSG HT G   C  F NRL+        DPTL+ T  ++L++  P
Sbjct:   33 LNATFYSGTCPNASAIVRSTIQQALQSDARIGGSLIRLHFHDCFVNGCDGSLLLDDTSSIQSEKNAPANANSTR-GFNVVDSIKTALENACPGIVSCSDILALASEASVSLAGGPSWTVLLGRRDGLTANLSGANSSLPSPFEGLNNITSKFVAVGLKTTDVVSLSGAHTFGRGQCVTFNNRLFNFNGTGNPDPTLNSTLLSSLQQLCP 240          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER4_ARATH (Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 7.175e-37
Identity = 88/206 (42.72%), Postives = 120/206 (58.25%), Query Frame = 3
Query:  123 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKF--VDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDS-KTFATVVNLPSPFSNTTVILND----FREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKRHAPL 719
            LS TFYDQ+C    S +R  I+ A+ ++  +AA LIR+HFHDCFV GCD SV+L  + + ++ R +L+  + A  F  +D  ++ V   C  VVSCADI+A+AARD+    GGP YD+ +GRRDS   F  + +   P  N    LND    F  K  N R+ VALSG HT+G A C  F  RLY      +D  F++  KR  P+
Sbjct:   21 LSPTFYDQTCQNALSTIRSSIRTAISRERRMAASLIRLHFHDCFVNGCDASVMLVATPTMESERDSLANFQSARGFEVIDQAKSAVESVCPGVVSCADIIAVAARDASEYVGGPRYDVKVGRRDSTNAFRAIADRDLP--NFRASLNDLSELFLRKGLNTRDLVALSGAHTLGQAQCLTFKGRLYDNSS-DIDAGFSSTRKRRCPV 223          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PERE5_ARMRU (Peroxidase E5 OS=Armoracia rusticana GN=HRPE5 PE=1 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.598e-36
Identity = 86/206 (41.75%), Postives = 128/206 (62.14%), Query Frame = 3
Query:  135 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTS---EQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDS-KTFATVVN--LPSPFSNTTVILNDFREKTFN-ARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKRHAP 716
            FY ++CP + +I++  I + L+ D  +AA ++R+HFHDCFV+GCD S+LL+ S S   E++A PN++  +     +D ++  + + C R VSCADIL +A++ SV LSGGP++ +PLGRRDS + F  + N  LPSPF     +   F +   N   + VALSGGHT G A C   T RLY      + DPTL+ ++  +L+R  P
Sbjct:    6 FYSRTCPSVFNIIKNVIVDELQTDPRIAASILRLHFHDCFVRGCDASILLDTSKSFRTEKDAAPNVNSAR-GFNVIDRMKTALERACPRTVSCADILTIASQISVLLSGGPSWAVPLGRRDSVEAFFDLANTALPSPFFTLAQLKKAFADVGLNRPSDLVALSGGHTFGRARCLFVTARLYNFNGTNRPDPTLNPSYLADLRRLCP 210          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER41_ARATH (Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.087e-36
Identity = 82/200 (41.00%), Postives = 119/200 (59.50%), Query Frame = 3
Query:  123 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGST---SEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRD---SKTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLK 704
            L+  +Y ++CP    IVR+ +     +    AAG +R+ FHDCF++GCD SVL+  ++   +E++   N SL  +A   V  ++  +   C  VVSCADILA A RD V + GGP Y++ LGR+D   SK      NLP    +   +L+ F++  F  +E VALSGGHT+G +HC  F+NR++PK DP L+  FA  LK
Sbjct:   26 LTKDYYQKTCPDFNKIVRETVTPKQGQQPTTAAGTLRLFFHDCFMEGCDASVLIATNSFNKAERDDDLNESLPGDAFDIVTRIKTALELSCPGVVSCADILAQATRDLVTMVGGPFYEVKLGRKDGFESKAHKVKGNLPLANQSVPDMLSIFKKNGFTLKELVALSGGHTIGFSHCKEFSNRIFPKVDPELNAKFAGVLK 225          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER68_ARATH (Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.726e-36
Identity = 87/201 (43.28%), Postives = 121/201 (60.20%), Query Frame = 3
Query:  135 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTS---EQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKT--FATVVN--LPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKRHAP 716
            FY  SCP L   VR+ +Q  + K+  +AA L+R+ FHDCFV GCD S+LL+ + S   E+ A PN +      + +D +++RV + C  VVSCADILA+ ARDSV L GG  + + LGRRDS T  F+T  +  LP P S    ++N FR    + R+ VALSG HT+G A C  F +R+Y      +D +FA + +R  P
Sbjct:   34 FYSDSCPSLLPTVRRVVQREVAKERRIAASLLRLFFHDCFVNGCDASILLDDTRSFLGEKTAGPN-NNSVRGYEVIDAIKSRVERLCPGVVSCADILAITARDSVLLMGGRGWSVKLGRRDSITASFSTANSGVLPPPTSTLDNLINLFRANGLSPRDMVALSGAHTIGQARCVTFRSRIY--NSTNIDLSFALSRRRSCP 231          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER20_ARATH (Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.561e-36
Identity = 91/213 (42.72%), Postives = 133/213 (62.44%), Query Frame = 3
Query:  108 PVAKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLE---GSTSEQNARPNL-SLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDS--KTFATVVN-LPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTF-ANNLKRHAPLR 722
            P+ KG    FY +SCP  E IV+  I+ A+ KD  +AA L+R+ FHDCFV GCD SVLL+      SE+ A PNL SLR    + +D ++  + + C   VSC+DILALAARDSV L GGP +++ LGRRDS   +FA     +P+P S+   ++ +F+++  N ++ +ALSG HT+G A C +F  R+     P +++TF  +  +RH+  R
Sbjct:   29 PLLKG----FYKESCPLAEEIVKHNIEVAVLKDPRMAASLLRLQFHDCFVLGCDASVLLDTHGDMLSEKQATPNLNSLR--GFEVIDYIKYLLEEACPLTVSCSDILALAARDSVFLRGGPWWEVLLGRRDSLKASFAGANQFIPAPNSSLDSLIINFKQQGLNIQDLIALSGAHTIGKARCVSFKQRIV---QPNMEQTFYVDEFRRHSTFR 232          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER44_ARATH (Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.650e-36
Identity = 81/206 (39.32%), Postives = 120/206 (58.25%), Query Frame = 3
Query:  105 PPVAKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLE---GSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDS-KTFATVVNLPSPFSNTTVILNDFREKTFNARETVAL-SGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKR 707
            P     L   FY +SCP+ ESIV   + N  + D  + A  +R+ FHDCFV+GCD S+L++   G  SE++  PN S+R    + +D+ + ++   C R VSCADI+ LA RDSVAL+GGP + +P GRRD  ++    VNLP P    +  +  F  +  N  + V L  GGH+VG+AHC  F +RL    D  ++ +  ++L+R
Sbjct:   16 PSALAQLRTGFYSRSCPRAESIVASVVANRFRSDKSITAAFLRMQFHDCFVRGCDASLLIDPRPGRPSEKSTGPNASVR--GYEIIDEAKRQLEAACPRTVSCADIVTLATRDSVALAGGPRFSVPTGRRDGLRSNPNDVNLPGPTIPVSASIQLFAAQGMNTNDMVTLIGGGHSVGVAHCSLFQDRL---SDRAMEPSLKSSLRR 216          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER3_ARMRU (Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.650e-36
Identity = 88/206 (42.72%), Postives = 124/206 (60.19%), Query Frame = 3
Query:  135 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTS---EQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDS-KTFATVVN--LPSPFSNTTVILNDFREKTFN-ARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKRHAP 716
            FY ++CP + +I+   I + L+ D  +AA L+R+HFHDCFV+GCD S+LL+ STS   E++A PN +  +     +D ++  + + C R VSCAD+L +A++ SV LSGGP + +PLGRRDS + F  + N  LPSPF     +   F +   N   + VALSGGHT G A C   T RLY      + DPTLD T+   L+   P
Sbjct:   35 FYFRTCPSVFNIIGDIIVDELRTDPRIAASLLRLHFHDCFVRGCDASILLDNSTSFRTEKDAAPNANSAR-GFGVIDRMKTSLERACPRTVSCADVLTIASQISVLLSGGPWWPVPLGRRDSVEAFFDLANTALPSPFFTLAQLKKAFADVGLNRPSDLVALSGGHTFGRAQCQFVTPRLYNFNGTNRPDPTLDPTYLVQLRALCP 239          
The following BLAST results are available for this feature:
BLAST of FC923094 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER5_ARATH4.206e-3742.44Peroxidase 5 OS=Arabidopsis thaliana GN=PER5 PE=2 ... [more]
PER33_ARATH5.493e-3741.63Peroxidase 33 OS=Arabidopsis thaliana GN=PER33 PE=... [more]
PER54_ARATH7.175e-3741.15Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=... [more]
PER4_ARATH7.175e-3742.72Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 ... [more]
PERE5_ARMRU1.598e-3641.75Peroxidase E5 OS=Armoracia rusticana GN=HRPE5 PE=1... [more]
PER41_ARATH2.087e-3641.00Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=... [more]
PER68_ARATH2.726e-3643.28Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=... [more]
PER20_ARATH3.561e-3642.72Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=... [more]
PER44_ARATH4.650e-3639.32Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=... [more]
PER3_ARMRU4.650e-3642.72Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3... [more]

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Properties
Property NameValue
Genbank descriptionC31701A06EF StrClemenN Citrus clementina cDNA clone C31701A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923094 ID=FC923094; Name=FC923094; organism=Citrus clementina; type=EST; length=723bp
ACAAAGCGAGGTAATCAACAATGGCAACTGCTTCAGCTTCTTCTTTCATT
TCTCTTCTTTTGATATCTTCTCTTTTGCTTGCTTCTTTCACTGAGGCACA
AAAGCCCCCAGTAGCGAAAGGTCTCTCATGGACTTTTTATGACCAGAGCT
GTCCCAAGCTTGAATCCATTGTCAGAAAACAGATCCAAAATGCCCTGAAA
AAAGATATCGGCCTAGCTGCTGGCTTGATTCGCATCCATTTCCACGATTG
CTTCGTTCAGGGATGTGATGGATCAGTGTTGCTAGAGGGATCAACTAGTG
AGCAAAATGCACGTCCAAACCTAAGCTTAAGGAAGGAGGCTTTAAAATTT
GTAGACGATCTTCGTGCTCGTGTTCACAAGGAGTGTGGCAGAGTTGTTTC
TTGTGCTGATATTCTTGCCCTTGCTGCTCGCGATTCTGTTGCCTTGTCTG
GAGGGCCGAATTACGACCTACCATTGGGAAGGCGAGACAGCAAAACATTC
GCAACAGTGGTAAATCTGCCATCACCGTTCAGCAACACCACCGTGATCCT
CAACGATTTCCGAGAAAAAACCTTCAACGCCAGGGAAACCGTGGCCCTCT
CCGGCGGGCACACCGTTGGGCTAGCTCACTGCCCTGCATTCACCAATCGC
CTCTATCCCAAACAAGACCCCACACTGGACAAAACATTCGCCAACAATCT
CAAAAGACATGCCCCACTTCGGA
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