FC923094

Overview
NameFC923094
Unique NameFC923094
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10680 contig Ccv1_Contig10680:109..843. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER43_ARATH (Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=2 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 6.074e-36
Identity = 79/202 (39.11%), Postives = 121/202 (59.90%), Query Frame = 3
Query:  135 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLL-EGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSK--TFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYP-----KQDPTLDKTFANNLKRHAP 716
            FY  +CP+ ESIV++ +  A   D  L A L+R+HFHDCFV+GCDGS+L+  G+ SE+NA  +  +R    + V+ ++A +   C  VVSC+DI+ALAARD+++L+ GP Y++P GRRD +    +   ++P    +  ++   F +K  NA++ V LS  HT+G   C   + RLY      + DPT++ TF   L    P
Sbjct:   30 FYSNTCPQAESIVKRVVSGAALSDPNLPAILLRLHFHDCFVEGCDGSILVNNGAISEKNAFGHEGVR--GFEIVEAVKAELEAACPGVVSCSDIVALAARDAISLANGPAYEVPTGRRDGRVSNMSLAKDMPEVSDSIEILKAKFMQKGLNAKDLVLLSAAHTIGTTACFFMSKRLYDFLPGGQPDPTINPTFLPELTTQCP 229          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER11_ARATH (Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.074e-36
Identity = 77/184 (41.85%), Postives = 116/184 (63.04%), Query Frame = 3
Query:  123 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTS---EQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFA---TVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY 656
            L+  +Y  +CP +  +++K+++  +K+D   AA +IR+HFHDCFVQGCDGSVLL+ + +   E+ A PN++  K   K VD ++  +  EC  VVSCAD+L + ARD+  L GGP +D+P+GR+DSKT +      NLP+P      I+  F  +  +  + VAL G HT+G A C  F +R+Y
Sbjct:   30 LTLDYYKSTCPTVFDVIKKEMECIVKEDPRNAAIIIRLHFHDCFVQGCDGSVLLDETETLQGEKKASPNINSLK-GYKIVDRIKNIIESECPGVVSCADLLTIGARDATILVGGPYWDVPVGRKDSKTASYELATTNLPTPEEGLISIIAKFYSQGLSVEDMVALIGAHTIGKAQCRNFRSRIY 212          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER17_ARATH (Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.036e-35
Identity = 79/205 (38.54%), Postives = 125/205 (60.98%), Query Frame = 3
Query:  135 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKF--VDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN---LPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKRHAPL 719
            FY ++CP+ ESIVR++++ A+ K+    A ++R  FHDCFV GCD S+LL+ + +    + +LS       F  VDD++  + K C   VSCADI+ +AARD+VAL+GGP++++ LGR+DS T +   +   +PSP +N T +++ F     + ++ VALSG H++G   C +   RLY      K DP L+ ++   L +  PL
Sbjct:   27 FYSETCPEAESIVRREMKKAMIKEARSVASVMRFQFHDCFVNGCDASLLLDDTPNMLGEKLSLSNIDSLRSFEVVDDIKEALEKACPATVSCADIVIMAARDAVALTGGPDWEVKLGRKDSLTASQQDSDDIMPSPRANATFLIDLFERFNLSVKDMVALSGSHSIGQGRCFSIMFRLYNQSGSGKPDPALEPSYRKKLDKLCPL 231          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER22_ARATH (Peroxidase 22 OS=Arabidopsis thaliana GN=PER22 PE=1 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 2.308e-35
Identity = 89/206 (43.20%), Postives = 123/206 (59.71%), Query Frame = 3
Query:  135 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTS---EQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDS-KTFATVVN--LPSPFSNTTVILNDFREKTFN-ARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKRHAP 716
            FY  +CP +  I+   I + L+ D  +AA L+R+HFHDCFV+GCD S+LL+ STS   E++A PN +  +     +D ++  + + C   VSCADIL +A++ SV LSGGP + +PLGRRDS + F  + N  LPSPF N T +   F +   N   + VALSGGHT G A C   T RLY        DP+L+ T+   L+R  P
Sbjct:   35 FYFGTCPFVFDIIGNIIVDELQTDPRIAASLLRLHFHDCFVRGCDASILLDNSTSFRTEKDAAPNANSAR-GFNVIDRMKVALERACPGRVSCADILTIASQISVLLSGGPWWPVPLGRRDSVEAFFALANTALPSPFFNLTQLKTAFADVGLNRTSDLVALSGGHTFGRAQCQFVTPRLYNFNGTNSPDPSLNPTYLVELRRLCP 239          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PERX_TOBAC (Lignin-forming anionic peroxidase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.142e-35
Identity = 85/208 (40.87%), Postives = 116/208 (55.77%), Query Frame = 3
Query:  123 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLL--EGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKT---FATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKRHAP 716
            LS TFYD +CP + SIVR  +    + D    A +IR+HFHDCFV GCDGS+LL  +G+ +E++A  N+         VDD++  +   C  VVSCADILALA+   V L+ GP++ +  GR+DS T        ++PSPF    V++  F  K  +  + VALSG HT G A C  F  RL+        D T+D TF   L+   P
Sbjct:   24 LSATFYDTTCPNVTSIVRGVMDQRQRTDARAGAKIIRLHFHDCFVNGCDGSILLDTDGTQTEKDAPANVG--AGGFDIVDDIKTALENVCPGVVSCADILALASEIGVVLAKGPSWQVLFGRKDSLTANRSGANSDIPSPFETLAVMIPQFTNKGMDLTDLVALSGAHTFGRARCGTFEQRLFNFNGSGNPDLTVDATFLQTLQGICP 229          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER19_ARATH (Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.770e-35
Identity = 90/222 (40.54%), Postives = 122/222 (54.95%), Query Frame = 3
Query:  102 KPPVAKG---LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLE---GST--SEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVNLPS--PFSNTTV--ILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKRHAP 716
            KPP  +    LS  +Y + CP+LE++V        K+    A   IR+ FHDCFV+GCDGS+L+E   GS   +E+ A  N  LR+E    +   +A V   C  +VSC+DILA+AARD + L+GGP Y +  GR D K  +T  N+P   P SN+TV  ++  F  K     E V LSG HT+G AHC  F  RLY      + DP+LD+     L+   P
Sbjct:   32 KPPAPRPHRELSADYYSKKCPQLETLVGSVTSQRFKEVPISAPATIRLFFHDCFVEGCDGSILIETKKGSKKLAEREAYENKELREEGFDSIIKAKALVESHCPSLVSCSDILAIAARDFIHLAGGPYYQVKKGRWDGKR-STAKNVPPNIPRSNSTVDQLIKLFASKGLTVEELVVLSGSHTIGFAHCKNFLGRLYDYKGTKRPDPSLDQRLLKELRMSCP 252          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER1_HORVU (Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.145e-34
Identity = 87/203 (42.86%), Postives = 119/203 (58.62%), Query Frame = 3
Query:  123 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNL-SLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDS---KTFATVVNLPSPFSNTTVILNDFREK-TFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKRHAP 716
            LS TFYD SCP+  + ++  +  A+  D  + A L+R+HFHDCFVQGCD SVLL G   EQNA PN  SLR      +D ++ ++   C + VSCADIL +AARDSV   GGP++ +PLGRRDS          +LP   S+   +   F +K   N  + VALSG HT+G A C  F  R+Y   D  ++  +A +L+ + P
Sbjct:   23 LSPTFYDTSCPRALATIKSGVMAAVTSDPRMGASLLRLHFHDCFVQGCDASVLLSG--MEQNAIPNAGSLR--GFGVIDSIKTQIEAICKQTVSCADILTVAARDSVVALGGPSWTVPLGRRDSIDANENEANTDLPGFNSSRAELEAAFLKKGGLNTVDMVALSGAHTIGQAQCSTFRARIY-GGDTNINAAYAASLRANCP 220          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER58_ARATH (Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.954e-34
Identity = 82/212 (38.68%), Postives = 117/212 (55.19%), Query Frame = 3
Query:  123 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLL-----EGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFA---TVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY------PKQDPTLDKTFANNLKRHAP 716
            L+  FY  +CP + +I R  I+ A + D+ L A ++R+HFHDCFV GCDGSVLL     +G   E+ A  N     +  + +DD++  +   C  VVSCADILA+AA  SVAL+GGP+ D+ LGRRD +T      V  LP    +  ++ + F     +  + VALSG HT G   C    NRL+       + DP+++  F   L+R  P
Sbjct:   25 LTSDFYSTTCPNVTAIARGLIERASRNDVRLTAKVMRLHFHDCFVNGCDGSVLLDAAPADGVEGEKEAFQNAG-SLDGFEVIDDIKTALENVCPGVVSCADILAIAAEISVALAGGPSLDVLLGRRDGRTAIRADAVAALPLGPDSLEILTSKFSVHNLDTTDLVALSGAHTFGRVQCGVINNRLHNFSGNSGQSDPSIEPEFLQTLRRQCP 235          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER63_ARATH (Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.333e-34
Identity = 79/201 (39.30%), Postives = 117/201 (58.21%), Query Frame = 3
Query:  123 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGS---TSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTF-ATVVN--LPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKR 707
            L+  FY +SCPK   I+R+ I N        AA  +R+ FHDCF  GCD SVL+  +   T+E+++  NLSL  +    V   +  +   C   VSC+DI+A+A RD +   GGP Y++ LGRRDS+T  +++V+  LP P    + +++ F  + F+ +E VALSG HT+G +HC  FTNR+ P      +  FA  LK+
Sbjct:   32 LTVDFYSKSCPKFLDIIRETITNKQISTPTTAAAALRLFFHDCFPNGCDASVLVSSTAFNTAERDSSINLSLPGDGFDVVIRAKTALELACPNTVSCSDIIAVAVRDLLVTVGGPYYEISLGRRDSRTSKSSLVSDLLPLPSMQISKLIDQFSSRGFSVQEMVALSGAHTIGFSHCKEFTNRVNPNNSTGYNPRFAVALKK 232          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER55_ARATH (Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=1 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.353e-34
Identity = 80/203 (39.41%), Postives = 111/203 (54.68%), Query Frame = 3
Query:  123 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLL--EGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRD---SKTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRL-----YPKQDPTLDKTFANNL 701
            LS  +Y  +CP +E IV++ +    K+ +  A   +R+ FHDCFV+GCD SV +  E   +E++A  N SL  +    V   +  V  +C  VVSCADILALAARD V L GGP + + LGRRD   SK       LP P  +   ++  F     +  + +ALSG HT+G +HC  F NRL     +   DPT+D  +A  L
Sbjct:   32 LSENYYASTCPSVELIVKQAVTTKFKQTVTTAPATLRMFFHDCFVEGCDASVFIASENEDAEKDADDNKSLAGDGFDTVIKAKTAVESQCPGVVSCADILALAARDVVVLVGGPEFKVELGRRDGLVSKASRVTGKLPEPGLDVRGLVQIFASNGLSLTDMIALSGAHTIGSSHCNRFANRLHNFSTFMPVDPTMDPVYAQQL 234          
The following BLAST results are available for this feature:
BLAST of FC923094 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER43_ARATH6.074e-3639.11Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=... [more]
PER11_ARATH6.074e-3641.85Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=... [more]
PER17_ARATH1.036e-3538.54Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=... [more]
PER22_ARATH2.308e-3543.20Peroxidase 22 OS=Arabidopsis thaliana GN=PER22 PE=... [more]
PERX_TOBAC5.142e-3540.87Lignin-forming anionic peroxidase OS=Nicotiana tab... [more]
PER19_ARATH8.770e-3540.54Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=... [more]
PER1_HORVU1.145e-3442.86Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1[more]
PER58_ARATH1.954e-3438.68Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=... [more]
PER63_ARATH3.333e-3439.30Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=... [more]
PER55_ARATH4.353e-3439.41Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC31701A06EF StrClemenN Citrus clementina cDNA clone C31701A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923094 ID=FC923094; Name=FC923094; organism=Citrus clementina; type=EST; length=723bp
ACAAAGCGAGGTAATCAACAATGGCAACTGCTTCAGCTTCTTCTTTCATT
TCTCTTCTTTTGATATCTTCTCTTTTGCTTGCTTCTTTCACTGAGGCACA
AAAGCCCCCAGTAGCGAAAGGTCTCTCATGGACTTTTTATGACCAGAGCT
GTCCCAAGCTTGAATCCATTGTCAGAAAACAGATCCAAAATGCCCTGAAA
AAAGATATCGGCCTAGCTGCTGGCTTGATTCGCATCCATTTCCACGATTG
CTTCGTTCAGGGATGTGATGGATCAGTGTTGCTAGAGGGATCAACTAGTG
AGCAAAATGCACGTCCAAACCTAAGCTTAAGGAAGGAGGCTTTAAAATTT
GTAGACGATCTTCGTGCTCGTGTTCACAAGGAGTGTGGCAGAGTTGTTTC
TTGTGCTGATATTCTTGCCCTTGCTGCTCGCGATTCTGTTGCCTTGTCTG
GAGGGCCGAATTACGACCTACCATTGGGAAGGCGAGACAGCAAAACATTC
GCAACAGTGGTAAATCTGCCATCACCGTTCAGCAACACCACCGTGATCCT
CAACGATTTCCGAGAAAAAACCTTCAACGCCAGGGAAACCGTGGCCCTCT
CCGGCGGGCACACCGTTGGGCTAGCTCACTGCCCTGCATTCACCAATCGC
CTCTATCCCAAACAAGACCCCACACTGGACAAAACATTCGCCAACAATCT
CAAAAGACATGCCCCACTTCGGA
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