FC923094

Overview
NameFC923094
Unique NameFC923094
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10680 contig Ccv1_Contig10680:109..843. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER16_ARATH (Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=1 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 4.353e-34
Identity = 85/210 (40.48%), Postives = 122/210 (58.10%), Query Frame = 3
Query:  123 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKE--CGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSK--TFATVV-NLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY---PKQ--DPTLDKTFANNLKRHAPLR 722
            L   FY +SCP +E+IVR  ++   ++    A   +R+ FHDCFV+GCD S+LL  S SE++   + SL  +    V   +  + ++  C   VSCADILALA RD V L+GGPNY + LGRRD +  T A+V  +LP P      +   F     +  + +ALSG HT+G AHC  F+ R+Y   PK+  DPTL+  +A  L++  P+R
Sbjct:   25 LQTNFYRKSCPNVETIVRNAVRQKFQQTFVTAPATLRLFFHDCFVRGCDASILL-ASPSEKDHPDDKSLAGDGFDTVAKAKQALDRDPNCRNKVSCADILALATRDVVVLTGGPNYPVELGRRDGRLSTVASVQHSLPQPSFKLDQLNTMFARHGLSQTDMIALSGAHTIGFAHCGKFSKRIYNFSPKRPIDPTLNIRYALQLRQMCPIR 233          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER13_ARATH (Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=1 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 2.160e-33
Identity = 83/206 (40.29%), Postives = 119/206 (57.77%), Query Frame = 3
Query:  114 AKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLE--GSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDS--KTFATVVNLPSPFSNTTVILNDFREKTFNARETVALS-GGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKRHAP 716
            A  L + FY ++CP  ESIVR  +Q A+  D G AA L+R+ FHDCFV+GCDGS+L++  G+  E+ A  N  +       +D+ ++ + + C  VVSCADI+ALAARD++A + GP Y++P GRRD          NLP    +   + + FREK  + ++ V LS G HT+G   C     RL   QDPT++  F   L+   P
Sbjct:   21 AAQLQFGFYSETCPSAESIVRDVVQQAVTNDPGKAAVLLRLQFHDCFVEGCDGSILIKHGGNDDERFAAGNAGV--AGFDVIDEAKSELERFCPGVVSCADIVALAARDAIAEAKGPFYEVPTGRRDGLIANVDHAKNLPDVQDSINTLKSKFREKGLSDQDLVLLSAGAHTIGTTACFFVIPRL-DAQDPTINPEFFQILRSKCP 223          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER2_ZINEL (Basic peroxidase OS=Zinnia elegans GN=POD3 PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.812e-33
Identity = 82/201 (40.80%), Postives = 117/201 (58.21%), Query Frame = 3
Query:  123 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKT---FATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKRHAP 716
            LS TFYD +CP   S +R  I++++  +   AA +IR+ FHDCFVQGCD S+LL G+ SE+ +  N  +     + +D  +A V + C  VVSCADILA+AARD+    GGP++ + LGRRDS T        +LP      + ++++F  K  N RE VALSG HT+G A C  F  R+Y      ++  F  +L +  P
Sbjct:   32 LSTTFYDTTCPTALSTIRTSIRSSVSSNRRNAALVIRLLFHDCFVQGCDASLLLSGAGSERASPANDGVL--GYEVIDAAKAAVERVCPGVVSCADILAVAARDASVAVGGPSWTVRLGRRDSTTSNAAQAATDLPRGNMVLSQLISNFANKGLNTREMVALSGSHTLGQARCIRFRGRIY-NSTLRIEPNFNRSLSQACP 229          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER1_ZINEL (Basic peroxidase OS=Zinnia elegans GN=POD1 PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.812e-33
Identity = 82/201 (40.80%), Postives = 117/201 (58.21%), Query Frame = 3
Query:  123 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKT---FATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKRHAP 716
            LS TFYD +CP   S +R  I++++  +   AA +IR+ FHDCFVQGCD S+LL G+ SE+ +  N  +     + +D  +A V + C  VVSCADILA+AARD+    GGP++ + LGRRDS T        +LP      + ++++F  K  N RE VALSG HT+G A C  F  R+Y      ++  F  +L +  P
Sbjct:   32 LSTTFYDTTCPTALSTIRTSIRSSVSSNRRNAALVIRLLFHDCFVQGCDASLLLSGAGSERASPANDGVL--GYEVIDAAKAAVERVCPGVVSCADILAVAARDASVAVGGPSWTVRLGRRDSTTSNAAQAATDLPRGNMVLSQLISNFANKGLNTREMVALSGSHTLGQARCIRFRGRIY-NSTLRIEPNFNRSLSQACP 229          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER24_ARATH (Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.209e-33
Identity = 84/207 (40.58%), Postives = 122/207 (58.94%), Query Frame = 3
Query:  123 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEG----STSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALS-GGPNYDLPLGRRDSK-TFATVV--NLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLK 704
            L   FY  SCP  E IVR+ +   ++ +  LA  L+R+H+HDCFV+GCD S+LL+     + SE+ ARPNLSL     + +D+++  + K C   VSCADIL LAARD+V+     P +++  GR D + + AT    +LPS  +N T +   F E   +  + VALSG HT+G+AHC  F  RL         DP+L+ ++A+ LK
Sbjct:   46 LKMNFYHNSCPGAEDIVRQIVWKKVEANRSLAPKLLRVHYHDCFVRGCDASLLLDSVAGKAVSEKEARPNLSL--SGFEIIDEIKYILEKRCPNTVSCADILTLAARDAVSYEFERPLWNVFTGRVDGRVSLATEAARDLPSAGANFTTLQKLFAESDLDVVDLVALSGAHTIGIAHCGVFGRRLLNFTGKGDTDPSLNPSYASFLK 250          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER21_ARATH (Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.119e-32
Identity = 78/205 (38.05%), Postives = 117/205 (57.07%), Query Frame = 3
Query:  123 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLE---GSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYD-LPLGRRDSK-TFATVVN--LPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKRHAP 716
            L   +Y +SCPK E I+R+Q++    K    A   +R  FHDC V+ CD S+LLE   G  SEQ ++ +  +R    K+V  ++  + KEC   VSCADI+AL+ARD + +  GP  + +  GRRDS+ ++   V   +P+   + + +++ F     +   TVAL G H+VG  HC    +RLYP  DPTLD ++A  LK+  P
Sbjct:   30 LEMNYYKESCPKAEEIIRQQVETLYYKHGNTAVSWLRNLFHDCVVKSCDASLLLETARGVESEQKSKRSFGMRN--FKYVKIIKDALEKECPSTVSCADIVALSARDGIVMLKGPKIEMIKTGRRDSRGSYLGDVETLIPNHNDSLSSVISTFNSIGIDVEATVALLGAHSVGRVHCVNLVHRLYPTIDPTLDPSYALYLKKRCP 232          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER50_ARATH (Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 6.949e-32
Identity = 79/207 (38.16%), Postives = 112/207 (54.11%), Query Frame = 3
Query:  135 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLL---EGSTSEQNARPNLSLRKEALKFVDDLRARVH--KECGRVVSCADILALAARDSVALSGGPNYDLPLGRRD--SKTFATV-VNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKRHAP 716
            FY  SCP +E IVR  +Q  +++        +R++FHDCFV GCD SV++     + +E++   NLSL  +    V   +  +     C   VSCADIL +A RD V L+GGP YD+ LGR D  S T A+V   LP P  +   + + F +   +  + +ALSG HT+G AHC    NR+Y      K DPT++K +   LK   P
Sbjct:   31 FYAGSCPNVEQIVRNAVQKKVQQTFTTIPATLRLYFHDCFVNGCDASVMIASTNNNKAEKDHEENLSLAGDGFDTVIKAKEALDAVPNCRNKVSCADILTMATRDVVNLAGGPQYDVELGRLDGLSSTAASVGGKLPHPTDDVNKLTSLFAKNGLSLNDMIALSGAHTLGFAHCTKVFNRIYTFNKTTKVDPTVNKDYVTELKASCP 237          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER1_SOLLC (Suberization-associated anionic peroxidase 1 OS=Solanum lycopersicum GN=TAP1 PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 6.949e-32
Identity = 77/164 (46.95%), Postives = 101/164 (61.59%), Query Frame = 3
Query:  165 SIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEG----STSEQNARPNLSLRKEALKFVDDLRARVHKECGRV-VSCADILALAARDSVALSGGPNYDLPLGRRDSKT--FATVVN-LPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHC 632
            S VR  + +A+  +  + A LIR+HFHDCFV GCDG +LL+      T EQN+ PN +  +   + +   +  V   C  V VSCADILA+AARDSVA  GG  Y + LGR D++T  F+  +N LP+PF N TV +  F +K F  RE VAL+G HTVG A C
Sbjct:   84 SAVRAVVDSAIDAETRMGASLIRLHFHDCFVDGCDGGILLDDINGTFTGEQNSPPNANSAR-GYEVIAQAKQSVINTCPNVSVSCADILAIAARDSVAKLGGQTYSVALGRSDARTANFSGAINQLPAPFDNLTVQIQKFSDKNFTLREMVALAGAHTVGFARC 246          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER46_ARATH (Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 9.076e-32
Identity = 77/204 (37.75%), Postives = 113/204 (55.39%), Query Frame = 3
Query:  123 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVNLPSPFSNTTVILND----FREKTFNARETVALSGGHTVGLAHCPAFTNRL-------YPKQDPTLDKTFANNL 701
            LS+ FY  SC   E +VR  +++A   D  +   L+R+ FHDCFVQGCD SVL++G+++E++   N SL       +D  +  +   C   VSCADI+ALAARD+V  +GGP  ++P GRRD K  +   N+     +T   L+     F  K  + ++ V LSG HT+G +HC AF  R        +   D +LD ++A  L
Sbjct:   29 LSFNFYASSCSVAEFLVRNTVRSATSSDPTIPGKLLRLFFHDCFVQGCDASVLIQGNSTEKSDPGNASL--GGFSVIDTAKNAIENLCPATVSCADIVALAARDAVEAAGGPVVEIPTGRRDGKE-SMAANVRPNIIDTDFTLDQMIDAFSSKGLSIQDLVVLSGAHTIGASHCNAFNGRFQRDSKGNFEVIDASLDNSYAETL 229          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER26_ARATH (Probable peroxidase 26 OS=Arabidopsis thaliana GN=PER26 PE=2 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 9.076e-32
Identity = 80/213 (37.56%), Postives = 116/213 (54.46%), Query Frame = 3
Query:  108 PVAKGLSWTFYD--QSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTF-ATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKRHAPLR 722
            P  + L+W +Y    +C   E+ VR Q++   K D  +A  L+R+ + DCFV GCD SVLLEG  SE+ A  N  L    L  +D ++  + + C  VVSCADIL LA RD+V L+G P+Y +  GRRD  T     V+LPSP  +    ++ F+ +  N  +   L G H++G  HC    +RLY      K  PT++K F + + +  P R
Sbjct:   30 PSMQKLTWHYYKVYNTCENAENFVRHQVEIFYKNDKSIAPKLLRLLYSDCFVSGCDASVLLEGPNSEKMAPQNRGLGGFVL--IDKIKIVLEQRCPGVVSCADILNLATRDAVHLAGAPSYPVFTGRRDGLTSDKQTVDLPSPSISWDQAMSYFKSRGLNVLDMATLLGSHSMGRTHCSYVVDRLYNYNKTGKPSPTMNKYFLSEMAKQCPPR 240          
The following BLAST results are available for this feature:
BLAST of FC923094 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER16_ARATH4.353e-3440.48Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=... [more]
PER13_ARATH2.160e-3340.29Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=... [more]
PER2_ZINEL4.812e-3340.80Basic peroxidase OS=Zinnia elegans GN=POD3 PE=1 SV... [more]
PER1_ZINEL4.812e-3340.80Basic peroxidase OS=Zinnia elegans GN=POD1 PE=1 SV... [more]
PER24_ARATH8.209e-3340.58Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=... [more]
PER21_ARATH3.119e-3238.05Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=... [more]
PER50_ARATH6.949e-3238.16Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=... [more]
PER1_SOLLC6.949e-3246.95Suberization-associated anionic peroxidase 1 OS=So... [more]
PER46_ARATH9.076e-3237.75Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=... [more]
PER26_ARATH9.076e-3237.56Probable peroxidase 26 OS=Arabidopsis thaliana GN=... [more]

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Properties
Property NameValue
Genbank descriptionC31701A06EF StrClemenN Citrus clementina cDNA clone C31701A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923094 ID=FC923094; Name=FC923094; organism=Citrus clementina; type=EST; length=723bp
ACAAAGCGAGGTAATCAACAATGGCAACTGCTTCAGCTTCTTCTTTCATT
TCTCTTCTTTTGATATCTTCTCTTTTGCTTGCTTCTTTCACTGAGGCACA
AAAGCCCCCAGTAGCGAAAGGTCTCTCATGGACTTTTTATGACCAGAGCT
GTCCCAAGCTTGAATCCATTGTCAGAAAACAGATCCAAAATGCCCTGAAA
AAAGATATCGGCCTAGCTGCTGGCTTGATTCGCATCCATTTCCACGATTG
CTTCGTTCAGGGATGTGATGGATCAGTGTTGCTAGAGGGATCAACTAGTG
AGCAAAATGCACGTCCAAACCTAAGCTTAAGGAAGGAGGCTTTAAAATTT
GTAGACGATCTTCGTGCTCGTGTTCACAAGGAGTGTGGCAGAGTTGTTTC
TTGTGCTGATATTCTTGCCCTTGCTGCTCGCGATTCTGTTGCCTTGTCTG
GAGGGCCGAATTACGACCTACCATTGGGAAGGCGAGACAGCAAAACATTC
GCAACAGTGGTAAATCTGCCATCACCGTTCAGCAACACCACCGTGATCCT
CAACGATTTCCGAGAAAAAACCTTCAACGCCAGGGAAACCGTGGCCCTCT
CCGGCGGGCACACCGTTGGGCTAGCTCACTGCCCTGCATTCACCAATCGC
CTCTATCCCAAACAAGACCCCACACTGGACAAAACATTCGCCAACAATCT
CAAAAGACATGCCCCACTTCGGA
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