FC923094

Overview
NameFC923094
Unique NameFC923094
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10680 contig Ccv1_Contig10680:109..843. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER65_ARATH (Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=2 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 1.548e-31
Identity = 77/197 (39.09%), Postives = 112/197 (56.85%), Query Frame = 3
Query:  135 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGST---SEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRD---SKTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-PKQDPTLDKTFANNLK 704
            +Y ++CP    IVR+ +     +    AAG +R+ FHDCF++GCD SVL+  ++   +E++   N SL  +A   V  ++  +   C  VVSCADILA A RD V + GGP +D+ LGR+D   SK      N+P        I   F++  F+ RE VALSG HT+G +HC  F++RLY  + D  ++  FA  LK
Sbjct:   37 YYQKTCPDFHKIVREAVTTKQVQQPTTAAGTLRLFFHDCFLEGCDASVLIATNSFNKAERDDDLNDSLPGDAFDIVTRIKTALELSCPGVVSCADILAQATRDLVTMVGGPYFDVKLGRKDGFESKAHKVRGNVPMANQTVPDIHGIFKKNGFSLREMVALSGAHTIGFSHCKEFSDRLYGSRADKEINPRFAAALK 233          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER61_ARATH (Probable peroxidase 61 OS=Arabidopsis thaliana GN=PER61 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.022e-31
Identity = 80/214 (37.38%), Postives = 114/214 (53.27%), Query Frame = 3
Query:  105 PPVAKGLSWTFYD--QSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTF-ATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKRHAPLR 722
            PPV   L W +Y    +C   E+ +R Q++   K D  +A  L+R+ + DC V GCDGS+LL+G  SE+ A  N  L       +D ++  +   C  VVSCADIL LA RD+V ++G P+Y +  GRRD  T  A  V+LPSP  +    L  F+ K  +  +   L G H++G  HC    +RLY      K DPT++ T  + L+   P R
Sbjct:   31 PPVK--LVWHYYKLTNTCDDAETYIRYQVEKFYKNDSSIAPKLLRLLYSDCMVNGCDGSILLQGPNSERTAPQNRGL--GGFVIIDKIKQVLESRCPGVVSCADILNLATRDAVHMAGAPSYPVFTGRRDGGTLNADAVDLPSPSISVDESLAYFKSKGLDVLDMTTLLGAHSMGKTHCSYVVDRLYNFKNTGKPDPTMNTTLVSQLRYLCPPR 240          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER18_ARATH (Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.022e-31
Identity = 81/203 (39.90%), Postives = 112/203 (55.17%), Query Frame = 3
Query:  123 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVNLPSPFSNTTVI---LNDFREKTFNARETVALSGGHTVGLAHCPAFTNR--LYPKQ-----DPTLDKTFANNL 701
            LS+ FY  SCP  E IVR  +++A   D  +   L+R+ FHDCFVQGCDGSVL+ G+ +E++   N SL   A+  ++ ++  +   C   VSCADIL LAARD+V   GGP   +P GRRD +        P+       +   +N F  K  +  + V LSG HT+G AHC  F +R  L PK      D +LD ++A  L
Sbjct:   31 LSFNFYAGSCPGAELIVRNTVRSASSSDPSVLGKLLRLIFHDCFVQGCDGSVLIRGNGTERSDPGNASLGGFAV--IESVKNILEIFCPGTVSCADILVLAARDAVEALGGPVVPIPTGRRDGRVSMAANVRPNIIDTDFTVDKMINIFSSKGLSVHDLVVLSGAHTIGAAHCNTFNSRFKLDPKGNLELIDASLDNSYAQTL 231          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PERX_SOLTU (Suberization-associated anionic peroxidase OS=Solanum tuberosum PE=2 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 2.641e-31
Identity = 74/164 (45.12%), Postives = 99/164 (60.37%), Query Frame = 3
Query:  165 SIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEG----STSEQNARPNLSLRKEALKFVDDLRARVHKECGRV-VSCADILALAARDSVALSGGPNYDLPLGRRDSKT---FATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHC 632
            S VR  + +A+  +  + A LIR+HFHDCFV GCDG +LL+      T EQN+ PN +  +   + +   +  V   C  + VSCADILA+AARDSVA  GG  Y++ LGR D++T      +  LP+PF N TV +  F +K F  RE VAL+G HTVG A C
Sbjct:   83 SAVRGVVDSAIDAETRMGASLIRLHFHDCFVDGCDGGILLDDINGTFTGEQNSPPNANSAR-GYEVIAQAKQSVIDTCPNISVSCADILAIAARDSVAKLGGQTYNVALGRSDARTANFTGALTQLPAPFDNLTVQIQKFNDKNFTLREMVALAGAHTVGFARC 245          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER45_ARATH (Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.641e-31
Identity = 78/213 (36.62%), Postives = 120/213 (56.34%), Query Frame = 3
Query:  111 VAKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARV--HKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSK--TFATVVN-LPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKRHAPL 719
            V+  L   FY  SCP +E+IVR  ++   ++    A   +R+ FHDCFV+GCD S+++  S SE++   ++SL  +    V   +  V  +  C   VSCADILALA R+ V L+GGP+Y + LGRRD +  T A+V + LP P  N   +   F     +  + +ALSG HT+G AHC   + R+Y      + DP++++ +   LK+  P+
Sbjct:   23 VSAQLRTGFYQNSCPNVETIVRNAVRQKFQQTFVTAPATLRLFFHDCFVRGCDASIMI-ASPSERDHPDDMSLAGDGFDTVVKAKQAVDSNPNCRNKVSCADILALATREVVVLTGGPSYPVELGRRDGRISTKASVQSQLPQPEFNLNQLNGMFSRHGLSQTDMIALSGAHTIGFAHCGKMSKRIYNFSPTTRIDPSINRGYVVQLKQMCPI 234          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER29_ARATH (Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=2 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 4.504e-31
Identity = 71/180 (39.44%), Postives = 106/180 (58.89%), Query Frame = 3
Query:  117 KGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQ----NARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDS----KTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHC 632
            +GLS+++Y+++CPK+E IVR  + +    D    A L+R+ FHDC VQGCD S+LLE    +Q    ++  N  +RK  L  V  ++  +  EC + VSC+D++ LAARD+VAL+GGP   +PLGR+DS            LP   ++    L+ F  K     E+VA+ G HT+G+ HC
Sbjct:   36 EGLSYSYYEKTCPKVEEIVRSSLSSMFILDPTSPAALLRLMFHDCQVQGCDASILLEPIRDQQFTELDSAKNFGIRKRDL--VGSIKTSLELECPKQVSCSDVIILAARDAVALTGGPLISVPLGRKDSLSTPSKHVADSELPPSTADVDTTLSLFANKGMTIEESVAIMGAHTIGVTHC 213          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER51_ARATH (Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.883e-31
Identity = 77/207 (37.20%), Postives = 107/207 (51.69%), Query Frame = 3
Query:  135 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGST---SEQNARPNLSLRKEALKFVDDLRARVH--KECGRVVSCADILALAARDSVALSGGPNYDLPLGRRD---SKTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKRHAP 716
            FY  +CP +E IVR  +Q  +++        +R++FHDCFV GCD SV++  +    +E++   NLSL  +    V   +  V     C   VSCADIL +A RD V L+GGP Y + LGRRD   S   +    LP P  +   +   F E   +  + +ALSG HT+G AHC    NRLY        DPT++K +   LK   P
Sbjct:   31 FYAGTCPNVEQIVRNAVQKKIQQTFTTIPATLRLYFHDCFVNGCDASVMIASTNTNKAEKDHEDNLSLAGDGFDTVIKAKEAVDAVPNCRNKVSCADILTMATRDVVNLAGGPQYAVELGRRDGLSSSASSVTGKLPKPTFDLNQLNALFAENGLSPNDMIALSGAHTLGFAHCTKVFNRLYNFNKTNNVDPTINKDYVTELKASCP 237          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER7_ARATH (Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 7.683e-31
Identity = 78/207 (37.68%), Postives = 115/207 (55.56%), Query Frame = 3
Query:  108 PVAKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSK-TFA-TVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKR 707
            P+   LS  +YD+ CP  E IV  +++   K D  L   L+R+ FHDC V GCD SVLL+   +E+ +  + +LR    + +DD+++ + K C   VSCADIL  A+R +    GGP +    GRRDSK ++A  V  +PS   + T +L  F+    N  + V LSG HT+G A C    +RLY        DP++D  +A+ L+R
Sbjct:   46 PLDNLLSLNYYDRICPDFEKIVVTKVREWTKSDSSLGPALLRLIFHDCGVTGCDASVLLDYEGTERRSPASKTLR--GFELIDDIKSEMEKSCPGKVSCADILTSASRAATVQLGGPYWPNVYGRRDSKHSYARDVEKVPSGRRDVTALLETFQSYGLNVLDLVVLSGAHTIGKASCGTIQSRLYNYNATSGSDPSIDAKYADYLQR 250          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER8_ARATH (Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.003e-30
Identity = 76/206 (36.89%), Postives = 117/206 (56.80%), Query Frame = 3
Query:  105 PPVAKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGST---SEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDS-KTFATVVNLPSPFSNTTVILNDFREKTFNARETVAL-SGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKR 707
            P V   L   FY+ +CP  ESIV + + N   ++  + A L+R+ FHDC V+GCD S+L++ +T   SE++   N  +R    + +D+ +  +   C + VSCADI+ +A RDS+AL+GGP + +  GRRD  ++  + V L  P  +    +  F+   FN    VAL  GGHTVG+AHC  F +R+   +DP +D      LK+
Sbjct:   16 PSVFAQLRHGFYEGTCPPAESIVGRVVFNHWDRNRTVTAALLRMQFHDCVVKGCDASLLIDPTTERPSEKSVGRNAGVR--GFEIIDEAKKELELVCPKTVSCADIVTIATRDSIALAGGPKFKVRTGRRDGLRSNPSDVKLLGPTVSVATSIKAFKSIGFNVSTMVALIGGGHTVGVAHCSLFQDRI---KDPKMDSKLRAKLKK 216          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER35_ARATH (Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.311e-30
Identity = 76/211 (36.02%), Postives = 111/211 (52.61%), Query Frame = 3
Query:  123 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEG---STSEQNARPNLSLRKEALKFVDDLRARV--HKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRD---SKTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYP-----KQDPTLDKTFANNLKRHAP 716
            LS  FY ++CP +E IVR  +Q  +KK        +R+ FHDCFV GCD SV+++    + +E++   N+SL  +    V   +  +  +  C   VSCADIL LA RD V  +GGP+Y++ LGR D   S   +   NLP P  N   +   F +      + +ALS  HT+G AHC     R++        DPTL+K +A  L++  P
Sbjct:   27 LSRGFYSKTCPNVEQIVRNAVQKKIKKTFVAVPATLRLFFHDCFVNGCDASVMIQSTPKNKAEKDHPDNISLAGDGFDVVIQAKKALDSNPSCRNKVSCADILTLATRDVVVAAGGPSYEVELGRFDGLVSTASSVEGNLPGPSDNVDKLNALFTKNKLTQEDMIALSAAHTLGFAHCGKVFKRIHKFNGINSVDPTLNKAYAIELQKACP 237          
The following BLAST results are available for this feature:
BLAST of FC923094 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER65_ARATH1.548e-3139.09Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=... [more]
PER61_ARATH2.022e-3137.38Probable peroxidase 61 OS=Arabidopsis thaliana GN=... [more]
PER18_ARATH2.022e-3139.90Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=... [more]
PERX_SOLTU2.641e-3145.12Suberization-associated anionic peroxidase OS=Sola... [more]
PER45_ARATH2.641e-3136.62Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=... [more]
PER29_ARATH4.504e-3139.44Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=... [more]
PER51_ARATH5.883e-3137.20Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=... [more]
PER7_ARATH7.683e-3137.68Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 ... [more]
PER8_ARATH1.003e-3036.89Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 ... [more]
PER35_ARATH1.311e-3036.02Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC31701A06EF StrClemenN Citrus clementina cDNA clone C31701A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923094 ID=FC923094; Name=FC923094; organism=Citrus clementina; type=EST; length=723bp
ACAAAGCGAGGTAATCAACAATGGCAACTGCTTCAGCTTCTTCTTTCATT
TCTCTTCTTTTGATATCTTCTCTTTTGCTTGCTTCTTTCACTGAGGCACA
AAAGCCCCCAGTAGCGAAAGGTCTCTCATGGACTTTTTATGACCAGAGCT
GTCCCAAGCTTGAATCCATTGTCAGAAAACAGATCCAAAATGCCCTGAAA
AAAGATATCGGCCTAGCTGCTGGCTTGATTCGCATCCATTTCCACGATTG
CTTCGTTCAGGGATGTGATGGATCAGTGTTGCTAGAGGGATCAACTAGTG
AGCAAAATGCACGTCCAAACCTAAGCTTAAGGAAGGAGGCTTTAAAATTT
GTAGACGATCTTCGTGCTCGTGTTCACAAGGAGTGTGGCAGAGTTGTTTC
TTGTGCTGATATTCTTGCCCTTGCTGCTCGCGATTCTGTTGCCTTGTCTG
GAGGGCCGAATTACGACCTACCATTGGGAAGGCGAGACAGCAAAACATTC
GCAACAGTGGTAAATCTGCCATCACCGTTCAGCAACACCACCGTGATCCT
CAACGATTTCCGAGAAAAAACCTTCAACGCCAGGGAAACCGTGGCCCTCT
CCGGCGGGCACACCGTTGGGCTAGCTCACTGCCCTGCATTCACCAATCGC
CTCTATCCCAAACAAGACCCCACACTGGACAAAACATTCGCCAACAATCT
CAAAAGACATGCCCCACTTCGGA
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