FC923099
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923099 vs. ExPASy Swiss-Prot
Match: DAZP1_MOUSE (DAZ-associated protein 1 OS=Mus musculus GN=Dazap1 PE=2 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 2.028e-27 Identity = 65/159 (40.88%), Postives = 91/159 (57.23%), Query Frame = 2 Query: 203 GKIFIGGLARETSPAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKG--------------AVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGEVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 634 GK+F+GGL T+ +F +YGE+ D VIMKD+ T Q RGFGFV + DP+ V V+ H ++G+ ++ K P+G S K+ KIFVGGIP + E E +++F +FG V E ++ D R RGFGFITF+ EQ+VD Sbjct: 10 GKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVD 168 HSP 2 Score: 68.9366 bits (167), Expect = 2.661e-11 Identity = 34/101 (33.66%), Postives = 58/101 (57.43%), Query Frame = 2 Query: 158 EDDRSQPHTG-------DGASPGKIFIGGLARETSPAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPK 436 + +R++P G D + KIF+GG+ + ++F K+G +T+ V++ D + +PRGFGF+T+ D VD+ + H I GK+VE+KR P+ Sbjct: 91 QPERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPR 191
BLAST of FC923099 vs. ExPASy Swiss-Prot
Match: DAZP1_XENLA (DAZ-associated protein 1 OS=Xenopus laevis GN=dazap1 PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.459e-27 Identity = 65/164 (39.63%), Postives = 94/164 (57.32%), Query Frame = 2 Query: 191 GASPGKIFIGGLARETSPAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKG---------------AVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGEVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 634 G GK+F+GGL T+ +F +YGE+ D VIMKD+ T Q RGFGFV + DP+ V V+ H ++G+ ++ K P+G +++ ++ KIFVGGIP + E E K++F +FG V E ++ D R RGFGFITF+ EQ+VD Sbjct: 6 GDEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERSRPREGWQQKEPRTENSRSNKIFVGGIPHNCGETELKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVD 169 HSP 2 Score: 67.781 bits (164), Expect = 5.928e-11 Identity = 33/102 (32.35%), Postives = 58/102 (56.86%), Query Frame = 2 Query: 158 EDDRSQPHTG--------DGASPGKIFIGGLARETSPAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPK 436 + +RS+P G + + KIF+GG+ + ++F ++G +T+ V++ D + +PRGFGF+T+ D VD+ + H I GK+VE+KR P+ Sbjct: 91 QPERSRPREGWQQKEPRTENSRSNKIFVGGIPHNCGETELKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPR 192
BLAST of FC923099 vs. ExPASy Swiss-Prot
Match: SQD_DROME (RNA-binding protein squid OS=Drosophila melanogaster GN=sqd PE=1 SV=3) HSP 1 Score: 120.939 bits (302), Expect = 5.901e-27 Identity = 64/176 (36.36%), Postives = 98/176 (55.68%), Query Frame = 2 Query: 119 DSNDVHKSSDHHPEDDRSQPHTGDGASPGKIFIGGLARETSPAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADPSVVDKV-IEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGEVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL 643 ++ D + + D +G K+F+GGL+ ET+ + HFGKYGEI + D +TG+ RGF F+ + + +DKV D HIIN K+V+ K+ + KIFVGG+ + ++++E K +F QFG + E ++ D S+ +GF FITFD+EQ V DLL Sbjct: 28 ENGDAGAAGSTNGSSDNQSAASGQRDDDRKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSAADEHIINSKKVDPKKAKARHG---------KIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLL 194
BLAST of FC923099 vs. ExPASy Swiss-Prot
Match: RB97D_DROME (Ribonucleoprotein RB97D OS=Drosophila melanogaster GN=Rb97D PE=1 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 7.707e-27 Identity = 69/196 (35.20%), Postives = 110/196 (56.12%), Query Frame = 2 Query: 77 EPMDPESNEGIV--DRDSNDVHKSSDHHPEDDRSQPHTGDGASPGKIFIGGLARETSPAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKD--FKTKKIFVGGIPSSVNEDEFKDFFMQFGEVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLXK 649 EP+ ES + IV DR+ +D+ + K+FIGGLA T+ +G++G++ D V+M+D T + RGFGF+TY +VD+ E+ HII+GK VE KR +P+ S++ KK+FVGG+ + +E+ +++F+QFG V +++ D +T + RGF F+ FD AVD + K Sbjct: 5 EPLSDESADVIVLADREEDDICELEHLR-----------------KLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDRAQENRPHIIDGKTVEAKRALPRPERESRETNISVKKLFVGGLKDNHDEECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAILK 183
BLAST of FC923099 vs. ExPASy Swiss-Prot
Match: ROA1_SCHAM (Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog OS=Schistocerca americana GN=HNRNP PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.315e-26 Identity = 65/167 (38.92%), Postives = 94/167 (56.29%), Query Frame = 2 Query: 164 DRSQPHTGDGASPGKIFIGGLARETSPAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD--FKTKKIFVGGIPSSVNEDEFKDFFMQFGEVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLXKGN 655 DR H G+ K+FIGGL T+ +HF ++GEI D V+MKD KT + RGFGF+TY+ +VD H ++G+ VE KR +P+ +G + KK+FVGGI + E++ +D+F Q+G V I+ D T + RGF F+ FD VD + N Sbjct: 5 DRENDH-GEPEHVRKLFIGGLDYRTTDESLKQHFEQWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQNARPHKVDGRVVEPKRAVPRTEIGRPEAGATVKKLFVGGIKEEMEENDLRDYFKQYGTVVSAAIVVDKETRKKRGFAFVEFDDYDPVDKICLSRN 170
BLAST of FC923099 vs. ExPASy Swiss-Prot
Match: RA1L2_HUMAN (Heterogeneous nuclear ribonucleoprotein A1-like protein 2 OS=Homo sapiens GN=HNRNPA1L2 PE=2 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 2.929e-26 Identity = 60/149 (40.27%), Postives = 88/149 (59.06%), Query Frame = 2 Query: 206 KIFIGGLARETSPAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPK--GAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGEVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL 643 K+FIGGL+ ET+ HF ++G +TD V+M+D T + RGFGFVTYA VD + T H ++G+ VE KR + + KKIFVGGI E +D+F Q+G+++ +IM D + + RGF F+TFD +VD ++ Sbjct: 15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNTTPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV 163
BLAST of FC923099 vs. ExPASy Swiss-Prot
Match: RO32_XENLA (Heterogeneous nuclear ribonucleoprotein A3 homolog 2 OS=Xenopus laevis PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.113e-25 Identity = 61/169 (36.09%), Postives = 94/169 (55.62%), Query Frame = 2 Query: 146 DHHPEDDRSQPHTGDGASPGKIFIGGLARETSPAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADPSVVD-KVIEDTHIINGKQVEIKRTIPK--GAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGEVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL 643 DH P D + K+FIGGL+ ET+ +HF ++G++TD V+M+D +T + RGFGFVTY+ VD + H ++G+ VE KR + + A KKIFVGGI E +D+F +G+++ ++M D + + RGF F+TFD VD ++ Sbjct: 8 DHWPSSDDQGHEPKEPEQLRKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDASMSARPHKVDGRVVEPKRAVSREDSARPGAHLTVKKIFVGGIKEDTEEYHLRDYFEGYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIV 176
BLAST of FC923099 vs. ExPASy Swiss-Prot
Match: ROA1_DROME (Heterogeneous nuclear ribonucleoprotein A1 OS=Drosophila melanogaster GN=Hrb98DE PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.453e-25 Identity = 62/178 (34.83%), Postives = 97/178 (54.49%), Query Frame = 2 Query: 119 DSNDVHKSSDHHPEDDRSQPHTGDGASPGKIFIGGLARETSPAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKD--FKTKKIFVGGIPSSVNEDEFKDFFMQFGEVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL 643 +SN + + +DD Q + K+FIGGL T+ HF K+G I D V+MKD +T + RGFGF+TY+ S++D+ + H I+G+ VE KR +P+ + S + KK+FVG + +E +D+F FG + + I+ D T + RGF F+ FD VD ++ Sbjct: 3 NSNQNQNGNSNGHDDDFPQDSITEPEHMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQKSRPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVV 180
BLAST of FC923099 vs. ExPASy Swiss-Prot
Match: ROA1_RAT (Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus GN=Hnrnpa1 PE=1 SV=3) HSP 1 Score: 115.931 bits (289), Expect = 1.898e-25 Identity = 59/149 (39.60%), Postives = 87/149 (58.39%), Query Frame = 2 Query: 206 KIFIGGLARETSPAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPK--GAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGEVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL 643 K+FIGGL+ ET+ HF ++G +TD V+M+D T + RGFGFVTYA VD + H ++G+ VE KR + + KKIFVGGI E +D+F Q+G+++ +IM D + + RGF F+TFD +VD ++ Sbjct: 15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV 163
BLAST of FC923099 vs. ExPASy Swiss-Prot
Match: ROA1_PANTR (Heterogeneous nuclear ribonucleoprotein A1 OS=Pan troglodytes GN=HNRNPA1 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.898e-25 Identity = 59/149 (39.60%), Postives = 87/149 (58.39%), Query Frame = 2 Query: 206 KIFIGGLARETSPAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPK--GAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGEVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL 643 K+FIGGL+ ET+ HF ++G +TD V+M+D T + RGFGFVTYA VD + H ++G+ VE KR + + KKIFVGGI E +D+F Q+G+++ +IM D + + RGF F+TFD +VD ++ Sbjct: 15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV 163 The following BLAST results are available for this feature:
BLAST of FC923099 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 109
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923099 ID=FC923099; Name=FC923099; organism=Citrus clementina; type=EST; length=671bpback to top |