FC923101

Overview
NameFC923101
Unique NameFC923101
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: FGFR2_MOUSE (Fibroblast growth factor receptor 2 OS=Mus musculus GN=Fgfr2 PE=2 SV=4)

HSP 1 Score: 81.2629 bits (199), Expect = 5.699e-15
Identity = 57/188 (30.32%), Postives = 97/188 (51.60%), Query Frame = 1
Query:  106 DDAAVKVMKGDVSSEINILKKIN-HSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNR-------YQTS----DNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 633
            DDA  K +  D+ SE+ ++K I  H NII L G C  +G  Y++ E+A  G L ++L + R       Y  +    + +T+K  V   Y +A  + YL    +   +H++L   N+L+  N   KI +FGLAR   + ++ +     +L         +MAPE + + V T + DV++FGV++ E+ +
Sbjct:  521 DDATEKDLS-DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL------PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 698          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: FGFR2_HUMAN (Fibroblast growth factor receptor 2 OS=Homo sapiens GN=FGFR2 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.699e-15
Identity = 57/188 (30.32%), Postives = 97/188 (51.60%), Query Frame = 1
Query:  106 DDAAVKVMKGDVSSEINILKKIN-HSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNR-------YQTS----DNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 633
            DDA  K +  D+ SE+ ++K I  H NII L G C  +G  Y++ E+A  G L ++L + R       Y  +    + +T+K  V   Y +A  + YL    +   +H++L   N+L+  N   KI +FGLAR   + ++ +     +L         +MAPE + + V T + DV++FGV++ E+ +
Sbjct:  521 DDATEKDLS-DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL------PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 698          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: Y3868_ARATH (Probable inactive receptor kinase At3g08680 OS=Arabidopsis thaliana GN=At3g08680 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.444e-15
Identity = 46/158 (29.11%), Postives = 79/158 (50.00%), Query Frame = 1
Query:  175 HSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVV---GTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGR 639
            H N+  L  +   +    LVY++   G  S  LH N       L W+ R++I  + A  ++++H  +    +H N+K+ N+LL   L   +++FG+A                ++ H +    + GY APE IE    T K DV++FGV++LE+L+G+
Sbjct:  394 HVNVAPLRAYYFSKDEKLLVYDYYQGGNFSMLLHGNNEGGRAALDWETRLRICLEAARGISHIHSASGAKLLHGNIKSPNVLLTQELHVCVSDFGIAP--------------LMSHHTLIPSRSLGYRAPEAIETRKHTQKSDVYSFGVLLLEMLTGK 537          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: SSK22_YEAST (Serine/threonine-protein kinase SSK22 OS=Saccharomyces cerevisiae GN=SSK22 PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 7.444e-15
Identity = 59/210 (28.10%), Postives = 98/210 (46.67%), Query Frame = 1
Query:  106 DDAAVKVMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH--------EQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKL---DVFAFGVVVLELLSGRESCTGDQNCGAELLYASISRV 702
            D   +K +   +  E+ +L+ +NH NI++  G  VH     +  E+ + G+L+  L   R +  D +  +      +++   L YLH+      VH+++K  NILLD N   K  +FG AR+              +  G   +    ++GT  YMAPE I    +  KL   DV+A G VVLE+ +GR   +   N  A + + +  R+
Sbjct: 1069 DTTTMKKIFPLIKEEMTVLEMLNHPNIVQYYGVEVHRDKVNIFMEYCEGGSLASLLDHGRIE--DEMVTQ---VYTFELLEGLAYLHQ---SGVVHRDIKPENILLDFNGIIKYVDFGTARTVVGSRTRTVRNAAVQDFGVETKSLNEMMGTPMYMAPETISGSAVKGKLGADDVWALGCVVLEMATGRRPWSNLDNEWAIMYHVAAGRI 1270          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: SRC_RAT (Proto-oncogene tyrosine-protein kinase Src OS=Rattus norvegicus GN=Src PE=1 SV=3)

HSP 1 Score: 80.8777 bits (198), Expect = 7.444e-15
Identity = 67/219 (30.59%), Postives = 111/219 (50.68%), Query Frame = 1
Query:    1 ESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKGDD-AAVKVMKGDVSS------EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH--EQGG-YGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLEL 627
            ESL L    ++K+  G F       G V+ G++ G    A+K +K    S      E  ++KK+ H  +++L    V E   Y+V E+ + G+L D+L     +T   L   Q V ++  +A+ + Y+ +     YVH++L+ +NIL+  NL  K+ +FGLAR  E +E+   QG  + ++ T          APE    G  T K DV++FG+++ EL
Sbjct:  268 ESLRL----EVKLGQGCF-------GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VSEEPIYIVTEYMNKGSLLDFLKG---ETGKYLRLPQLVDMSAQIASGMAYVDRMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----------APEAALYGRFTIKSDVWSFGILLTEL 458          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: SRC64_DROME (Tyrosine-protein kinase Src64B OS=Drosophila melanogaster GN=Src64B PE=1 SV=3)

HSP 1 Score: 80.8777 bits (198), Expect = 7.444e-15
Identity = 65/211 (30.81%), Postives = 105/211 (49.76%), Query Frame = 1
Query:   34 KIATGSFSEENRIQGSVYRGSFKGD-DAAVKVMKGDVSS------EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLH--SNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH--EQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 633
            K+  G+F       G V+ G ++   D AVK ++    S      E  I+KK  H+ ++ L   C  E   Y+V E+   G+L D+L     RY     L ++  + IA  VA+ + YL    +   +H++L   N+L+  N  AKI +FGLAR    DE+  +QG      +R  V    + APE I  G  + K DV+++G++++EL +
Sbjct:  289 KLGRGNF-------GEVFYGKWRNSIDVAVKTLREGTMSTAAFLQEAAIMKKFRHNRLVALYAVCSQEEPIYIVQEYMSKGSLLDFLREGDGRY-----LHFEDLIYIATQVASGMEYLE---SKQLIHRDLAARNVLIGENNVAKICDFGLARVIADDEYCPKQG------SRFPV---KWTAPEAIIYGKFSIKSDVWSYGILLMELFT 475          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: SIK1_MOUSE (Serine/threonine-protein kinase SIK1 OS=Mus musculus GN=Sik1 PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 7.444e-15
Identity = 55/164 (33.54%), Postives = 85/164 (51.83%), Query Frame = 1
Query:  148 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVIT-PKLDVFAFGVVVLELLSG 636
            E+ ++K +NH NII+L      +   Y+V EFA NG + D+L SN      +L+  +  Q  + + +A+ Y H   N   VH++LKT N+LLD+N+  K+ +FG     +  E              VG+  Y APE  E      P+LDV++ GVV+  L+ G
Sbjct:   74 EVQLMKLLNHPNIIKLYQVMETKDMLYIVTEFAKNGEMFDYLTSN-----GHLSENEARQKFWQILSAVEYCH---NHHIVHRDLKTENLLLDSNMDIKLADFGFGNFYKPGEP---------LSTCVGSPPYAAPEVFEGKEYEGPQLDVWSLGVVLYVLVCG 220          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: LCK_RAT (Proto-oncogene tyrosine-protein kinase LCK OS=Rattus norvegicus GN=Lck PE=2 SV=3)

HSP 1 Score: 80.8777 bits (198), Expect = 7.444e-15
Identity = 57/196 (29.08%), Postives = 104/196 (53.06%), Query Frame = 1
Query:   76 GSVYRGSFKGDD-AAVKVMK-GDVS-----SEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH---EQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 633
            G V+ G + G    AVK +K G +S     +E N++K++ H  ++RL      E   Y++ E+ +NG+L D+L +    +   L   + + +A  +A  + ++ +     Y+H++L+ +NIL+   L  KI +FGLAR  E +E+   E   + ++ T          APE I  G  T K DV++FG+++ E+++
Sbjct:  257 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHPRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKT---PSGIKLNVNKLLDMAAQIAEGMAFIEEQN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT----------APEAINYGTFTIKSDVWSFGILLTEIVT 435          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: LCK_MOUSE (Proto-oncogene tyrosine-protein kinase LCK OS=Mus musculus GN=Lck PE=1 SV=4)

HSP 1 Score: 80.8777 bits (198), Expect = 7.444e-15
Identity = 57/196 (29.08%), Postives = 104/196 (53.06%), Query Frame = 1
Query:   76 GSVYRGSFKGDD-AAVKVMK-GDVS-----SEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH---EQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 633
            G V+ G + G    AVK +K G +S     +E N++K++ H  ++RL      E   Y++ E+ +NG+L D+L +    +   L   + + +A  +A  + ++ +     Y+H++L+ +NIL+   L  KI +FGLAR  E +E+   E   + ++ T          APE I  G  T K DV++FG+++ E+++
Sbjct:  257 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHPRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKT---PSGIKLNVNKLLDMAAQIAEGMAFIEEQN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT----------APEAINYGTFTIKSDVWSFGILLTEIVT 435          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: JAK1_MOUSE (Tyrosine-protein kinase JAK1 OS=Mus musculus GN=Jak1 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.444e-15
Identity = 55/191 (28.80%), Postives = 99/191 (51.83%), Query Frame = 1
Query:   91 GSFKGDDAAVKVMK--------GDVSSEINILKKINHSNIIRLSGFCVHEGNT--YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 633
            G   G+  AVK +K         D+  EI IL+ + H NI++  G C+ +G     L+ EF  +G+L ++L  N+    + +  KQ+++ A  +   ++YL    +  YVH++L   N+L+++  + KI +FGL ++ E+D+     Y ++  R       + APE +         DV++FGV + ELL+
Sbjct:  897 GDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICMEDGGNGIKLIMEFLPSGSLKEYLPKNK----NKINLKQQLKYAIQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEY---YTVKDDRD--SPVFWYAPECLIQCKFYIASDVWSFGVTLHELLT 1075          
The following BLAST results are available for this feature:
BLAST of FC923101 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FGFR2_MOUSE5.699e-1530.32Fibroblast growth factor receptor 2 OS=Mus musculu... [more]
FGFR2_HUMAN5.699e-1530.32Fibroblast growth factor receptor 2 OS=Homo sapien... [more]
Y3868_ARATH7.444e-1529.11Probable inactive receptor kinase At3g08680 OS=Ara... [more]
SSK22_YEAST7.444e-1528.10Serine/threonine-protein kinase SSK22 OS=Saccharom... [more]
SRC_RAT7.444e-1530.59Proto-oncogene tyrosine-protein kinase Src OS=Ratt... [more]
SRC64_DROME7.444e-1530.81Tyrosine-protein kinase Src64B OS=Drosophila melan... [more]
SIK1_MOUSE7.444e-1533.54Serine/threonine-protein kinase SIK1 OS=Mus muscul... [more]
LCK_RAT7.444e-1529.08Proto-oncogene tyrosine-protein kinase LCK OS=Ratt... [more]
LCK_MOUSE7.444e-1529.08Proto-oncogene tyrosine-protein kinase LCK OS=Mus ... [more]
JAK1_MOUSE7.444e-1528.80Tyrosine-protein kinase JAK1 OS=Mus musculus GN=Ja... [more]

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Properties
Property NameValue
Genbank descriptionC31701B02EF StrClemenN Citrus clementina cDNA clone C31701B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923101 ID=FC923101; Name=FC923101; organism=Citrus clementina; type=EST; length=703bp
GAGTCTTTAACTCTCTACAAATTTCAAGATTTGAAAATTGCCACTGGGAG
TTTTAGTGAAGAGAATAGAATCCAGGGCTCTGTGTACCGGGGGTCTTTCA
AAGGTGATGATGCTGCCGTTAAGGTGATGAAGGGGGATGTCTCAAGCGAG
ATCAACATTTTGAAGAAGATCAATCACAGTAACATAATACGGCTTTCTGG
TTTTTGCGTTCATGAAGGAAACACCTACCTTGTTTATGAGTTCGCAGACA
ATGGTGCTCTCAGTGACTGGCTCCACTCTAACAGGTACCAGACTTCTGAT
AATCTAACATGGAAGCAGCGTGTTCAGATTGCTTACGATGTGGCTAATGC
TCTCAATTACCTCCACAAGTACACCAATCCCCCATATGTCCACAAGAACT
TGAAGACCAGTAATATTCTCTTGGATACCAACTTGAGAGCCAAGATTACT
AATTTCGGGTTGGCAAGAAGTGCAGAGAGCGATGAGCATGAGCAGGGGGG
TTACGGACTGCAATTGACAAGGCATGTGGTTGGTACTTATGGTTACATGG
CCCCAGAGTATATTGAAAATGGAGTGATCACACCTAAACTAGATGTTTTT
GCCTTCGGGGTTGTGGTATTGGAGCTCTTATCCGGAAGGGAAAGCTGTAC
TGGTGATCAGAATTGTGGAGCGGAATTGCTATATGCATCAATTAGTAGGG
TGC
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