FC923101

Overview
NameFC923101
Unique NameFC923101
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Libraries
Library NameType
StrClemenNcdna_library
Homology
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: FGR_FSVGR (Tyrosine-protein kinase transforming protein Fgr OS=Feline sarcoma virus (strain Gardner-Rasheed) GN=V-FGR PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.444e-15
Identity = 74/231 (32.03%), Postives = 114/231 (49.35%), Query Frame = 1
Query:    4 SLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKGDD-AAVKVMKGDVSS------EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH--EQGG-YGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GRESCTGDQN 663
            S+TL +    ++ TG F       G V+ G + G    AVK +K    S      E  I+K + H  +++L    V E   Y+V EF  +G+L ++L     Q   +LT  Q V +A  VA  + Y+ +     Y+H++L+ +NIL+   L  KI +FGLAR  E +E+   QG  + ++ T          APE    G  T K DV++FG+++ EL+S GR    G  N
Sbjct:  285 SITLQR----RLGTGCF-------GDVWLGMWNGSTKVAVKTLKPGTMSPKASLEEAQIMKLLRHDKLVQLYAV-VPEEPIYIVTEFMCHGSLLEFLKD---QEGQDLTLPQLVDMAAQVAEGMAYMERMD---YIHRDLRAANILVGERLVCKIADFGLARLIEDNEYNPRQGAKFPIKWT----------APEAALFGRFTIKSDVWSFGILLTELISKGRVPYPGMNN 487          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: FGFR2_CHICK (Fibroblast growth factor receptor 2 OS=Gallus gallus GN=FGFR2 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.444e-15
Identity = 56/188 (29.79%), Postives = 95/188 (50.53%), Query Frame = 1
Query:  106 DDAAVKVMKGDVSSEINILKKIN-HSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNR-----------YQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 633
            DDA  K +  D+ SE+ ++K I  H NII L G C  +G  Y++ E+A  G L ++L + R               + +T+K  V   Y +A  + YL    +   +H++L   N+L+  N   KI +FGLAR   + ++ +     +L         +MAPE + + V T + DV++FGV++ E+ +
Sbjct:  523 DDATEKDLS-DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSFDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL------PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 700          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: EPHB3_XENLA (Ephrin type-B receptor 3 OS=Xenopus laevis GN=ephb3 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.444e-15
Identity = 63/207 (30.43%), Postives = 100/207 (48.31%), Query Frame = 1
Query:   37 IATGSFSEENRIQGSVYRGSFKGDDAAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 633
            I  G F E  R  G + +   +    A+K +K         D   E +I+ + +H NIIRL G         ++ EF +NGAL  +L  N  Q     T  Q V I   +A+ + YL +     YVH++L   NIL+++NL  K+++FGL+R  E+   +   Y   L   +     + APE I     T   DV+++G+V+ E++S
Sbjct:  615 IGAGEFGEVCR--GKLKQAGRREQFVAIKTLKAGYTEQQRRDFLGEASIMGQFDHPNIIRLEGVVTRSRPVMILTEFMENGALDSFLRMNDGQ----FTVIQLVGILRGIASGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFLENSRSDP-TYTSALGGKI--PIRWTAPEAISYRKFTSASDVWSYGIVMWEVMS 809          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: EPHB1_RAT (Ephrin type-B receptor 1 OS=Rattus norvegicus GN=Ephb1 PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 7.444e-15
Identity = 62/199 (31.16%), Postives = 97/199 (48.74%), Query Frame = 1
Query:   76 GSVYRGSFKGDD-----AAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 633
            G VY+G  K         A+K +K         D  SE +I+ + +H NIIRL G         ++ EF +NGAL  +L  N  Q     T  Q V +   +A  + YL +     YVH++L   NIL+++NL  K+++FGL+R  + D  +   Y   L   +     + APE I     T   DV+++G+V+ E++S
Sbjct:  631 GEVYKGRLKLPGKREIYVAIKTLKAGYSEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQ----FTVIQLVGMLRGIAAGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRYLQDDTSDP-TYTSSLGGKI--PVRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 819          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: EPHB1_MOUSE (Ephrin type-B receptor 1 OS=Mus musculus GN=Ephb1 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.444e-15
Identity = 62/199 (31.16%), Postives = 97/199 (48.74%), Query Frame = 1
Query:   76 GSVYRGSFKGDD-----AAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 633
            G VY+G  K         A+K +K         D  SE +I+ + +H NIIRL G         ++ EF +NGAL  +L  N  Q     T  Q V +   +A  + YL +     YVH++L   NIL+++NL  K+++FGL+R  + D  +   Y   L   +     + APE I     T   DV+++G+V+ E++S
Sbjct:  631 GEVYKGRLKLPGKREIYVAIKTLKAGYSEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQ----FTVIQLVGMLRGIAAGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRYLQDDTSDP-TYTSSLGGKI--PVRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 819          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: BMX_HUMAN (Cytoplasmic tyrosine-protein kinase BMX OS=Homo sapiens GN=BMX PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.444e-15
Identity = 63/221 (28.51%), Postives = 107/221 (48.42%), Query Frame = 1
Query:    1 ESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKGD-DAAVKVMK-GDVSS-----EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGT---YGYMAPEYIENGVITPKLDVFAFGVVVLELLS 633
            E +TL K    ++ +G F       G V  G +KG  D AVK++K G +S      E   + K++H  +++  G C  E   Y+V E+  NG L ++L S+       L   Q +++ YDV   + +L  +    ++H++L   N L+D +L  K+++FG+ R    D++             VGT     + APE       + K DV+AFG+++ E+ S
Sbjct:  415 EEITLLK----ELGSGQF-------GVVQLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSH----GKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSS----------VGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFS 607          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: YRK_CHICK (Proto-oncogene tyrosine-protein kinase Yrk OS=Gallus gallus GN=YRK PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 9.722e-15
Identity = 75/234 (32.05%), Postives = 114/234 (48.72%), Query Frame = 1
Query:    1 ESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKGDD-AAVKVMKGDVSS------EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSN--RYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH--EQGG-YGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GRESCTGDQN 663
            ESL L +    K+  G F       G V+ G++ G    AVK +K    S      E  I+K++ H  +++L    V E   Y+V EF   G+L D+L     RY     L   Q V +A  +A  + Y+ +     Y+H++L+ +NIL+  NL  KI +FGLAR  E +E+   QG  + ++ T          APE    G  T K DV++FG+++ EL++ GR    G  N
Sbjct:  268 ESLQLLQ----KLGNGQF-------GEVWMGTWNGTTKVAVKTLKPGTMSPEAFLEEAQIMKRLRHDKLVQLYAV-VSEEPIYIVTEFMSQGSLLDFLKDGDGRY-----LKLPQLVDMAAQIAAGMAYIERMN---YIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWT----------APEAALFGKFTIKSDVWSFGILLTELVTKGRVPYPGMNN 471          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: PTK7_HUMAN (Tyrosine-protein kinase-like 7 OS=Homo sapiens GN=PTK7 PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 9.722e-15
Identity = 60/218 (27.52%), Postives = 104/218 (47.71%), Query Frame = 1
Query:   19 KFQDLKIATGSFSEENRIQGSVYRGSFKGDDAAVKVMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQ----TSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGRESCTGDQ 660
            +F ++ +A     EE   +  V   S +  D   ++   D   E+ +  K+NH+N++RL G C      Y+V E+ D G L  +L  ++ +     S  L+ KQ+V +   VA  + +L   +N  +VHK+L   N L+    + K++  GL++   + E+          R       +M+PE I  G  + K DV+AFGV++ E+ +  E   G Q
Sbjct:  806 EFGEVFLAKAQGLEEGVAETLVLVKSLQSKDEQQQL---DFRRELEMFGKLNHANVVRLLGLCREAEPHYMVLEYVDLGDLKQFLRISKSKDEKLKSQPLSTKQKVALCTQVALGMEHL---SNNRFVHKDLAARNCLVSAQRQVKVSALGLSKDVYNSEYYH-------FRQAWVPLRWMSPEAILEGDFSTKSDVWAFGVLMWEVFTHGEMPHGGQ 1010          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: M3KSL_DROME (Mitogen-activated protein kinase kinase kinase OS=Drosophila melanogaster GN=slpr PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.722e-15
Identity = 64/234 (27.35%), Postives = 106/234 (45.30%), Query Frame = 1
Query:   16 YKFQDLK--IATGSFSEENRIQGSVYRGSFKGDDAAVKV-----------MKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRA--------KITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGRESCTG 654
            Y   D+K  I +G F +       V+RG + G++ A+K+           M+ +V  E  +   + H NI  L G C++     LV E+A  G+L+  L + +      + W      A  +A  +NYLH       +H++LK+SN+L+   +          KIT+FGLAR   + +               GTY +M PE I     +   DV+++GV++ EL++G     G
Sbjct:  139 YNELDIKEVIGSGGFCK-------VHRGYYDGEEVAIKIAHQTGEDDMQRMRDNVLQEAKLFWALKHENIAALRGVCLNT-KLCLVMEYARGGSLNRIL-AGKIPPDVLVNW------AIQIARGMNYLHNEAPMSIIHRDLKSSNVLIYEAIEGNHLQQKTLKITDFGLAREMYNTQRMSAA----------GTYAWMPPEVISVSTYSKFSDVWSYGVLLWELITGETPYKG 347          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: LYN_HUMAN (Tyrosine-protein kinase Lyn OS=Homo sapiens GN=LYN PE=1 SV=3)

HSP 1 Score: 80.4925 bits (197), Expect = 9.722e-15
Identity = 60/220 (27.27%), Postives = 106/220 (48.18%), Query Frame = 1
Query:    1 ESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKGDDAAVKVMKGDVSS------EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH---EQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 633
            ES+ L K    ++  G F E   +    Y  S K    AVK +K    S      E N++K + H  ++RL      E   Y++ E+   G+L D+L S+       +   + +  +  +A  + Y+ +     Y+H++L+ +N+L+  +L  KI +FGLAR  E +E+   E   + ++ T          APE I  G  T K DV++FG+++ E+++
Sbjct:  245 ESIKLVK----RLGAGQFGE---VWMGYYNNSTK---VAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDE---GGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWT----------APEAINFGCFTIKSDVWSFGILLYEIVT 438          
The following BLAST results are available for this feature:
BLAST of FC923101 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FGR_FSVGR7.444e-1532.03Tyrosine-protein kinase transforming protein Fgr O... [more]
FGFR2_CHICK7.444e-1529.79Fibroblast growth factor receptor 2 OS=Gallus gall... [more]
EPHB3_XENLA7.444e-1530.43Ephrin type-B receptor 3 OS=Xenopus laevis GN=ephb... [more]
EPHB1_RAT7.444e-1531.16Ephrin type-B receptor 1 OS=Rattus norvegicus GN=E... [more]
EPHB1_MOUSE7.444e-1531.16Ephrin type-B receptor 1 OS=Mus musculus GN=Ephb1 ... [more]
BMX_HUMAN7.444e-1528.51Cytoplasmic tyrosine-protein kinase BMX OS=Homo sa... [more]
YRK_CHICK9.722e-1532.05Proto-oncogene tyrosine-protein kinase Yrk OS=Gall... [more]
PTK7_HUMAN9.722e-1527.52Tyrosine-protein kinase-like 7 OS=Homo sapiens GN=... [more]
M3KSL_DROME9.722e-1527.35Mitogen-activated protein kinase kinase kinase OS=... [more]
LYN_HUMAN9.722e-1527.27Tyrosine-protein kinase Lyn OS=Homo sapiens GN=LYN... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31701B02EF StrClemenN Citrus clementina cDNA clone C31701B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923101 ID=FC923101; Name=FC923101; organism=Citrus clementina; type=EST; length=703bp
GAGTCTTTAACTCTCTACAAATTTCAAGATTTGAAAATTGCCACTGGGAG
TTTTAGTGAAGAGAATAGAATCCAGGGCTCTGTGTACCGGGGGTCTTTCA
AAGGTGATGATGCTGCCGTTAAGGTGATGAAGGGGGATGTCTCAAGCGAG
ATCAACATTTTGAAGAAGATCAATCACAGTAACATAATACGGCTTTCTGG
TTTTTGCGTTCATGAAGGAAACACCTACCTTGTTTATGAGTTCGCAGACA
ATGGTGCTCTCAGTGACTGGCTCCACTCTAACAGGTACCAGACTTCTGAT
AATCTAACATGGAAGCAGCGTGTTCAGATTGCTTACGATGTGGCTAATGC
TCTCAATTACCTCCACAAGTACACCAATCCCCCATATGTCCACAAGAACT
TGAAGACCAGTAATATTCTCTTGGATACCAACTTGAGAGCCAAGATTACT
AATTTCGGGTTGGCAAGAAGTGCAGAGAGCGATGAGCATGAGCAGGGGGG
TTACGGACTGCAATTGACAAGGCATGTGGTTGGTACTTATGGTTACATGG
CCCCAGAGTATATTGAAAATGGAGTGATCACACCTAAACTAGATGTTTTT
GCCTTCGGGGTTGTGGTATTGGAGCTCTTATCCGGAAGGGAAAGCTGTAC
TGGTGATCAGAATTGTGGAGCGGAATTGCTATATGCATCAATTAGTAGGG
TGC
back to top