FC923101

Overview
NameFC923101
Unique NameFC923101
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: FYN_XENLA (Proto-oncogene tyrosine-protein kinase Fyn OS=Xenopus laevis GN=fyn PE=2 SV=3)

HSP 1 Score: 79.337 bits (194), Expect = 2.166e-14
Identity = 71/232 (30.60%), Postives = 113/232 (48.71%), Query Frame = 1
Query:    1 ESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKGDD-AAVKVMKGDVSS------EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH--EQGG-YGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GRESCTGDQN 663
            ESL L K    ++  G F       G V+ G++ G+   A+K +K    S      E  I+KK+ H  +++L    V E   Y+V E+   G+L D+L     +    L     V +A  VA  + Y+ +     Y+H++L+++NIL+   L  KI +FGLAR  E +E+   QG  + ++ T          APE    G  T K DV++FG+++ EL++ GR    G  N
Sbjct:  269 ESLQLIK----RLGNGQF-------GEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKDGEGRA---LKLPNLVDMAAQVARGMAYIERMN---YIHRDLRSANILVGNGLICKIADFGLARLIEDNEYTARQGAKFPIKWT----------APEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN 472          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: EPHB4_MOUSE (Ephrin type-B receptor 4 OS=Mus musculus GN=Ephb4 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.166e-14
Identity = 63/207 (30.43%), Postives = 102/207 (49.28%), Query Frame = 1
Query:   37 IATGSFSEENRIQGSVYRGSFKGDDAAVKVMKGDVS--------SEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 633
            I  G F E  R  G +     K    A+K +KG  +        SE +I+ +  H NIIRL G   +     ++ EF +NGAL  +L  N  Q     T  Q V +   +A+ + YL + +   YVH++L   NIL+++NL  K+++FGL+R  E +  +   Y   L   +  +  + APE I     T   D +++G+V+ E++S
Sbjct:  621 IGAGEFGEVCR--GRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSVPVMILTEFMENGALDSFLRLNDGQ----FTVIQLVGMLRGIASGMRYLAEMS---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDP-TYTSSLGGKI--SIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 815          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: CIPKO_ARATH (CBL-interacting serine/threonine-protein kinase 24 OS=Arabidopsis thaliana GN=CIPK24 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.166e-14
Identity = 57/195 (29.23%), Postives = 94/195 (48.21%), Query Frame = 1
Query:   88 RGSFKGDDAAVKVMK----------GDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWL-HSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIE-NGVITPKLDVFAFGVVVLELLSG 636
            R +  GD+ A+K+M             +  EI+I+K + H NI+RL          Y+V EF   G L D + H  R + S++  + Q++  A          H +    Y H++LK  N+LLDTN   K+++FGL+   +         G++L R   GT  Y+APE +   G      D+++ GV++  +L+G
Sbjct:   29 RNTDTGDNVAIKIMAKSTILKNRMVDQIKREISIMKIVRHPNIVRLYEVLASPSKIYIVLEFVTGGELFDRIVHKGRLEESESRKYFQQLVDA--------VAHCHCKGVY-HRDLKPENLLLDTNGNLKVSDFGLSALPQE--------GVELLRTTCGTPNYVAPEVLSGQGYDGSAADIWSCGVILFVILAG 206          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: Y2278_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g02780 OS=Arabidopsis thaliana GN=At2g02780 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.829e-14
Identity = 59/237 (24.89%), Postives = 109/237 (45.99%), Query Frame = 1
Query:   13 LYKFQDLKIATGSFSEENRIQGSVYRGSFK-GDDAAVKVMK-------GDVSSEINILKKINHSNIIRLSGFCV--------HEGNT-YLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGRESCTGDQNCGA 672
            ++  ++L+ AT  F   +     +YRG  + G    V+V+K         ++ ++ +L K+ H +++ + G  +        H G+T ++V E+  +G+L D+L + R +  + L W QR+ IA  VA  + +LH    P     NLK  NI+LD  L  KI+ + +   ++  E                      P   E+     K DV+ FGV++L++++G+    G    G+
Sbjct:  439 VFSLEELEEATNDFDAASLFCEQLYRGCLREGIPVTVRVIKLKQKSLPQSLAQQMEVLSKLRHMHLVSVLGHSIASNQDHNQHAGHTIFIVQEYISSGSLRDFLTNCRKK--EVLKWPQRMAIAIGVARGIQFLHMGVAPGIFGNNLKIENIMLDETLTVKISGYTIPLPSKVGEERPQA---------------KKPRSNED---REKEDVYQFGVILLQIITGKVVAAGSSEMGS 655          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: RPKL_ARATH (Receptor protein kinase-like protein At4g34220 OS=Arabidopsis thaliana GN=At4g34220 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.829e-14
Identity = 50/174 (28.74%), Postives = 90/174 (51.72%), Query Frame = 1
Query:  148 EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDN--------LTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLAR--SAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGR 639
            E+  + K+ H N++R+ GFC  +    L+ ++  NG+L  +  + +  +S +        LT++ R++IA  +A  L+Y+++      VH N+K +NILL+      IT+ GL R  +   + H  G            +  Y  PE+  +    PK DV++FGV++LELL+ +
Sbjct:  517 EVRAIAKLRHPNLVRIRGFCWGDDEKLLISDYVPNGSLLCFFTATKASSSSSSSSSLQNPLTFEARLKIARGMARGLSYINE---KKQVHGNIKPNNILLNAENEPIITDLGLDRLMTPARESHTTG---------PTSSSPYQPPEWSTSLKPNPKWDVYSFGVILLELLTSK 678          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: KSYK_MOUSE (Tyrosine-protein kinase SYK OS=Mus musculus GN=Syk PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 2.829e-14
Identity = 57/217 (26.27%), Postives = 111/217 (51.15%), Query Frame = 1
Query:   10 TLYKFQDLKIATGSFSEENRIQGSVYRGSFKGDDAAVKVMKGDVS---------SEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 633
            +L   +D ++ +G+F     ++   Y+        AVK++K + +         +E N+++++++  I+R+ G C  E +  LV E A+ G L+ +L  NR+    N+     +++ + V+  + YL +     +VH++L   N+LL T   AKI++FGL+++  +DE+       +   H      + APE I     + K DV++FGV++ E  S
Sbjct:  362 SLLTLEDNELGSGNFGT---VKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYLQQNRHIKDKNI-----IELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY-----YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 561          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: FYN_RAT (Proto-oncogene tyrosine-protein kinase Fyn OS=Rattus norvegicus GN=Fyn PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.829e-14
Identity = 71/232 (30.60%), Postives = 114/232 (49.14%), Query Frame = 1
Query:    1 ESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKGDD-AAVKVMKGDVSS------EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH--EQGG-YGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GRESCTGDQN 663
            ESL L K    ++  G F       G V+ G++ G+   A+K +K    S      E  I+KK+ H  +++L    V E   Y+V E+ + G+L D+L     +    L     V +A  VA  + Y+ +     Y+H++L+++NIL+   L  KI +FGLAR  E +E+   QG  + ++ T          APE    G  T K DV++FG+++ EL++ GR    G  N
Sbjct:  269 ESLQLIK----RLGNGQF-------GEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLYAV-VSEEPIYIVTEYMNKGSLLDFLKDGEGRA---LKLPNLVDMAAQVAAGMAYIERMN---YIHRDLRSANILVGNGLICKIADFGLARLIEDNEYTARQGAKFPIKWT----------APEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN 472          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: FYN_PIG (Proto-oncogene tyrosine-protein kinase Fyn OS=Sus scrofa GN=FYN PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 2.829e-14
Identity = 71/232 (30.60%), Postives = 114/232 (49.14%), Query Frame = 1
Query:    1 ESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKGDD-AAVKVMKGDVSS------EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH--EQGG-YGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GRESCTGDQN 663
            ESL L K    ++  G F       G V+ G++ G+   A+K +K    S      E  I+KK+ H  +++L    V E   Y+V E+ + G+L D+L     +    L     V +A  VA  + Y+ +     Y+H++L+++NIL+   L  KI +FGLAR  E +E+   QG  + ++ T          APE    G  T K DV++FG+++ EL++ GR    G  N
Sbjct:  269 ESLQLIK----RLGNGQF-------GEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLYAV-VSEEPIYIVTEYMNKGSLLDFLKDGEGRA---LKLPNLVDMAAQVAAGMAYIERMN---YIHRDLRSANILVGNGLICKIADFGLARLIEDNEYTARQGAKFPIKWT----------APEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN 472          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: FYN_HUMAN (Proto-oncogene tyrosine-protein kinase Fyn OS=Homo sapiens GN=FYN PE=1 SV=3)

HSP 1 Score: 78.9518 bits (193), Expect = 2.829e-14
Identity = 71/232 (30.60%), Postives = 114/232 (49.14%), Query Frame = 1
Query:    1 ESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKGDD-AAVKVMKGDVSS------EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH--EQGG-YGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GRESCTGDQN 663
            ESL L K    ++  G F       G V+ G++ G+   A+K +K    S      E  I+KK+ H  +++L    V E   Y+V E+ + G+L D+L     +    L     V +A  VA  + Y+ +     Y+H++L+++NIL+   L  KI +FGLAR  E +E+   QG  + ++ T          APE    G  T K DV++FG+++ EL++ GR    G  N
Sbjct:  269 ESLQLIK----RLGNGQF-------GEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLYAV-VSEEPIYIVTEYMNKGSLLDFLKDGEGRA---LKLPNLVDMAAQVAAGMAYIERMN---YIHRDLRSANILVGNGLICKIADFGLARLIEDNEYTARQGAKFPIKWT----------APEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN 472          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: FYN_BOVIN (Proto-oncogene tyrosine-protein kinase Fyn OS=Bos taurus GN=FYN PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.829e-14
Identity = 71/232 (30.60%), Postives = 114/232 (49.14%), Query Frame = 1
Query:    1 ESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKGDD-AAVKVMKGDVSS------EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH--EQGG-YGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS-GRESCTGDQN 663
            ESL L K    ++  G F       G V+ G++ G+   A+K +K    S      E  I+KK+ H  +++L    V E   Y+V E+ + G+L D+L     +    L     V +A  VA  + Y+ +     Y+H++L+++NIL+   L  KI +FGLAR  E +E+   QG  + ++ T          APE    G  T K DV++FG+++ EL++ GR    G  N
Sbjct:  269 ESLQLIK----RLGNGQF-------GEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLYAV-VSEEPIYIVTEYMNKGSLLDFLKDGEGRA---LKLPNLVDMAAQVAAGMAYIERMN---YIHRDLRSANILVGNGLICKIADFGLARLIEDNEYTARQGAKFPIKWT----------APEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN 472          
The following BLAST results are available for this feature:
BLAST of FC923101 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FYN_XENLA2.166e-1430.60Proto-oncogene tyrosine-protein kinase Fyn OS=Xeno... [more]
EPHB4_MOUSE2.166e-1430.43Ephrin type-B receptor 4 OS=Mus musculus GN=Ephb4 ... [more]
CIPKO_ARATH2.166e-1429.23CBL-interacting serine/threonine-protein kinase 24... [more]
Y2278_ARATH2.829e-1424.89Probable LRR receptor-like serine/threonine-protei... [more]
RPKL_ARATH2.829e-1428.74Receptor protein kinase-like protein At4g34220 OS=... [more]
KSYK_MOUSE2.829e-1426.27Tyrosine-protein kinase SYK OS=Mus musculus GN=Syk... [more]
FYN_RAT2.829e-1430.60Proto-oncogene tyrosine-protein kinase Fyn OS=Ratt... [more]
FYN_PIG2.829e-1430.60Proto-oncogene tyrosine-protein kinase Fyn OS=Sus ... [more]
FYN_HUMAN2.829e-1430.60Proto-oncogene tyrosine-protein kinase Fyn OS=Homo... [more]
FYN_BOVIN2.829e-1430.60Proto-oncogene tyrosine-protein kinase Fyn OS=Bos ... [more]

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Properties
Property NameValue
Genbank descriptionC31701B02EF StrClemenN Citrus clementina cDNA clone C31701B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923101 ID=FC923101; Name=FC923101; organism=Citrus clementina; type=EST; length=703bp
GAGTCTTTAACTCTCTACAAATTTCAAGATTTGAAAATTGCCACTGGGAG
TTTTAGTGAAGAGAATAGAATCCAGGGCTCTGTGTACCGGGGGTCTTTCA
AAGGTGATGATGCTGCCGTTAAGGTGATGAAGGGGGATGTCTCAAGCGAG
ATCAACATTTTGAAGAAGATCAATCACAGTAACATAATACGGCTTTCTGG
TTTTTGCGTTCATGAAGGAAACACCTACCTTGTTTATGAGTTCGCAGACA
ATGGTGCTCTCAGTGACTGGCTCCACTCTAACAGGTACCAGACTTCTGAT
AATCTAACATGGAAGCAGCGTGTTCAGATTGCTTACGATGTGGCTAATGC
TCTCAATTACCTCCACAAGTACACCAATCCCCCATATGTCCACAAGAACT
TGAAGACCAGTAATATTCTCTTGGATACCAACTTGAGAGCCAAGATTACT
AATTTCGGGTTGGCAAGAAGTGCAGAGAGCGATGAGCATGAGCAGGGGGG
TTACGGACTGCAATTGACAAGGCATGTGGTTGGTACTTATGGTTACATGG
CCCCAGAGTATATTGAAAATGGAGTGATCACACCTAAACTAGATGTTTTT
GCCTTCGGGGTTGTGGTATTGGAGCTCTTATCCGGAAGGGAAAGCTGTAC
TGGTGATCAGAATTGTGGAGCGGAATTGCTATATGCATCAATTAGTAGGG
TGC
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