FC923101

Overview
NameFC923101
Unique NameFC923101
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: FGR_HUMAN (Proto-oncogene tyrosine-protein kinase Fgr OS=Homo sapiens GN=FGR PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 2.829e-14
Identity = 63/207 (30.43%), Postives = 105/207 (50.72%), Query Frame = 1
Query:   34 KIATGSFSEENRIQGSVYRGSFKGDD-AAVKVMKGDVSS------EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 633
            ++ TG F       G V+ G++ G    AVK +K    S      E  ++K + H  +++L    V E   Y+V EF  +G+L D+L +   Q   +L   Q V +A  VA  + Y+ +     Y+H++L+ +NIL+   L  KI +FGLAR  + DE+       Q ++  +    + APE    G  T K DV++FG+++ EL++
Sbjct:  268 RLGTGCF-------GDVWLGTWNGSTKVAVKTLKPGTMSPKAFLEEAQVMKLLRHDKLVQLYAV-VSEEPIYIVTEFMCHGSLLDFLKNPEGQ---DLRLPQLVDMAAQVAEGMAYMERMN---YIHRDLRAANILVGERLACKIADFGLARLIKDDEYNP----CQGSKFPI---KWTAPEAALFGRFTIKSDVWSFGILLTELIT 453          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: EPHA1_MOUSE (Ephrin type-A receptor 1 OS=Mus musculus GN=Epha1 PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 2.829e-14
Identity = 61/209 (29.19%), Postives = 102/209 (48.80%), Query Frame = 1
Query:   76 GSVYRGSFKGDD-----AAVKVMKG--------DVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGRESCTGDQN 663
            G VYRG+ +         A+K +K         +   E  I+ + NH +I+RL G         ++ EF +NGAL  +L     +  D L   Q V +   +A+ +N L  +    YVH++L   NIL++ NL  K+++FGL R  +  +   G Y  Q  +  +    + APE I + + T   DV++FG+V+ E+LS  +   G+ +
Sbjct:  637 GEVYRGALRLPSQDCKTVAIKTLKDTSPDGYWWNFLREATIMGQFNHPHILRLEGVITKRKPIMIITEFMENGALDAFLK----EREDQLAPGQLVAMLLGIASGMNCLSGHN---YVHRDLAARNILVNQNLCCKVSDFGLTRLLDDFD---GTYETQGGKIPI---RWTAPEAIAHRIFTTASDVWSFGIVMWEVLSFGDKPYGEMS 832          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: DST1_DICDI (Serine/threonine-protein kinase dst1 OS=Dictyostelium discoideum GN=dst1 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.829e-14
Identity = 58/218 (26.61%), Postives = 104/218 (47.71%), Query Frame = 1
Query:   10 TLYKFQDLKIATGSFSEENRIQGSVYRGSF--KGDDAAVKVMK-------GDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSG 636
            T+Y  Q+ ++  GSF       G V++      G   A+K++         DV  EI+IL + N+ NI++  G    +   ++V E+   G++SD L     Q  D ++  +   I  +    LNYLH++     +H+++K  NILL+     K+ +FG++    +   ++  +        VGT  +MAPE I+      K DV++ G+  +E+  G
Sbjct:   27 TIYHIQE-RLGKGSF-------GQVFKAVHFANGKVVAIKIISLDDQEAIKDVRKEISILAECNYPNIVQYFGSYFKDHQLWIVMEYCGGGSVSDLL-----QVIDTISEDEIALICREALKGLNYLHEFKK---IHRDIKGGNILLNDRGEVKLADFGVSAQLFNTFSKRNTF--------VGTPYWMAPEVIQENKYDGKADVWSLGITAIEMAEG 220          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: BMX_MOUSE (Cytoplasmic tyrosine-protein kinase BMX OS=Mus musculus GN=Bmx PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.829e-14
Identity = 61/221 (27.60%), Postives = 105/221 (47.51%), Query Frame = 1
Query:    1 ESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKGD-DAAVKVMKGDVSSE------INILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGT---YGYMAPEYIENGVITPKLDVFAFGVVVLELLS 633
            E +TL K    ++  G F       G V  G +KG  D AVK++K    SE         + K++H  +++  G C  +   Y+V E+  NG L ++L S+       L   Q +++ YDV   + +L  +    ++H++L   N L+D++L  K+++FG+ R    D++             VGT     + APE       + K DV+AFG+++ E+ S
Sbjct:  391 EEITLLK----ELGNGQF-------GVVQLGQWKGQYDVAVKMIKEGAMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKKYPIYIVTEYITNGCLLNYLKSH----GKGLESCQLLEMCYDVCEGMAFLESHQ---FIHRDLAARNCLVDSDLSVKVSDFGMTRYVLDDQYVSS----------VGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFS 583          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: YES_CHICK (Tyrosine-protein kinase Yes OS=Gallus gallus GN=YES1 PE=2 SV=3)

HSP 1 Score: 78.5666 bits (192), Expect = 3.694e-14
Identity = 68/221 (30.77%), Postives = 109/221 (49.32%), Query Frame = 1
Query:    1 ESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKGDD-AAVKVMKGDVS------SEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEH--EQGG-YGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 633
            ESL L    ++K+  G F       G V+ G++ G    A+K +K           E  I+KK+ H  ++ L    V E   Y+V EF   G+L D+L     +    L   Q V +A  +A+ + Y+ +     Y+H++L+ +NIL+  NL  KI +FGLAR  E +E+   QG  + ++ T          APE    G  T K DV++FG+++ EL++
Sbjct:  273 ESLRL----EVKLGQGCF-------GEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAV-VSEEPIYIVTEFMTKGSLLDFLKEGEGKF---LKLPQLVDMAAQIADGMAYIERMN---YIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWT----------APEAALYGRFTIKSDVWSFGILLTELVT 465          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: Y9847_DICDI (Probable serine/threonine-protein kinase DDB_G0267686 OS=Dictyostelium discoideum GN=DDB_G0267686 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.694e-14
Identity = 52/190 (27.37%), Postives = 92/190 (48.42%), Query Frame = 1
Query:   82 VYRGSFKGDDAAVKVMKGDVSS--------EINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLEL 627
            VYR +++  + AVKV++ +  S        E+ I+  +   +++   G  V +    ++ E+  N  L   +H        N TW    + A ++   +N LH +  P  VH++LK+ N+L+  N   K+ +FGL+R A +             R   GT+ Y APE +  G+ T K D+F+ G+++ EL
Sbjct: 1963 VYRATWRNQEVAVKVLRSEPESQKLLDFLKELEIMSSLRSPHVVYFYGM-VLDPKICMIMEYCSNQTLYHLMHLQM-----NFTWDWVFKFAIEMVRGVNCLHSW-KPVIVHRDLKSLNLLVSDNWTIKVADFGLSRFATAKSAS--------NRTTRGTFAYCAPE-VFYGIHTTKGDIFSIGIILWEL 2136          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: Y1061_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At1g50610 OS=Arabidopsis thaliana GN=At1g50610 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.694e-14
Identity = 66/223 (29.60%), Postives = 100/223 (44.84%), Query Frame = 1
Query:    1 ESLTLYKFQDLKIATGSFSEENRIQGSVYRGSFKGDDAAVK-------VMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYL-HKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEY--IENGVITPKLDVFAFGVVVLELLSGR 639
            + +  +  QDL  A+           S       G    VK       V + +    +  L ++NH NI+ L  +        LV EF  N +L+  LH+N    S  L W  R++I   VA  L+YL  +       H ++K+SNI+LD +    +T++ L R   S EH           H   T  Y +PEY   +  +IT K DV+ FGV++LE+L+GR
Sbjct:  363 DDIQRFDLQDLLRASAEVLGSGTFGASYKAAISSGQTLVVKRYKHMNNVGRDEFHEHMRRLGRLNHPNILPLVAYYYRREEKLLVTEFMPNSSLASHLHAN---NSAGLDWITRLKIIKGVAKGLSYLFDELPTLTIPHGHMKSSNIVLDDSFEPLLTDYAL-RPMMSSEH----------AHNFMT-AYKSPEYRPSKGQIITKKTDVWCFGVLILEVLTGR 570          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: Y0019_DICDI (Probable serine/threonine-protein kinase DDB_G0278521 OS=Dictyostelium discoideum GN=DDB_G0278521 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.694e-14
Identity = 62/231 (26.84%), Postives = 110/231 (47.62%), Query Frame = 1
Query:   34 KIATGSFSEENRIQGSVYRGSFKGDDAAVKVMKGD----------------VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHS---------NRYQTSDNLTWKQRVQ----IAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGR 639
            KI  G+F       G VY   ++  + AVK +K +                +   + ++K  N S+ ++L   C+ E    LV EF DNG+L   L++         N    ++N    Q +     ++ ++AN +NYLH    P  +H++L + NIL+D N  AKI +FG++R  ++D  ++       T   +G   + +PE  +    + K+DVF FG+++ E+ + R
Sbjct:  535 KIGAGAF-------GDVYLVEWRNKNVAVKRVKIEKILESGKSYQWIRDKFILEAVLMVKLSNFSSFVKLYATCIEEKELLLVLEFCDNGSLYTILNTIPIGGAGANNNNNNNNNNDIIQSLPSINTLSLNIANGMNYLHSL-KPQIIHRDLTSQNILIDRNGIAKIADFGISR-FKNDIGDK-------TMTSIGNPRFRSPEVTKGQKYSEKVDVFGFGMILYEMFTRR 749          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: ROR1_DROME (Tyrosine-protein kinase transmembrane receptor Ror OS=Drosophila melanogaster GN=Ror PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.694e-14
Identity = 57/200 (28.50%), Postives = 105/200 (52.50%), Query Frame = 1
Query:   34 KIATGSFSEENRIQGSVYRGSFKGDDAAVKVMKGDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 633
            K+  G   + N+   +V   + K ++A+VK  + D   EI ++  + H NI+ + G  +++    +++E+  NG L ++L SN      +L+  + +QIA  ++  + YL  +    YVH++L   N L++  L  KI++FGL+R   S ++    Y +Q    +     +M  E I  G  T + DV++FGVV+ E+ S
Sbjct:  423 KVYKGQLLQPNKTTITVAIKALK-ENASVKTQQ-DFKREIELISDLKHQNIVCILGVVLNKEPYCMLFEYMANGDLHEFLISNSPTEGKSLSQLEFLQIALQISEGMQYLSAHH---YVHRDLAARNCLVNEGLVVKISDFGLSRDIYSSDY----YRVQSKSLL--PVRWMPSESILYGKFTTESDVWSFGVVLWEIYS 611          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: FGFR3_MOUSE (Fibroblast growth factor receptor 3 OS=Mus musculus GN=Fgfr3 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.694e-14
Identity = 62/188 (32.98%), Postives = 94/188 (50.00%), Query Frame = 1
Query:  106 DDAAVKVMKGDVSSEINILKKIN-HSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSD-----------NLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 633
            DDA  K +  D+ SE+ ++K I  H NII L G C   G  Y++ E+A  G L ++L + R    D            LT K  V  AY VA  + YL    +   +H++L   N+L+  +   KI +FGLAR    D H    Y  + T +      +MAPE + + V T + DV++FGV++ E+ +
Sbjct:  506 DDATDKDLS-DLVSEMEMMKMIGKHKNIINLLGACTQGGPLYVLVEYAAKGNLREFLRARRPPGMDYSFDACRLPEEQLTCKDLVSCAYQVARGMEYL---ASQKCIHRDLAARNVLVTEDNVMKIADFGLAR----DVHNLDYY--KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFT 683          
The following BLAST results are available for this feature:
BLAST of FC923101 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FGR_HUMAN2.829e-1430.43Proto-oncogene tyrosine-protein kinase Fgr OS=Homo... [more]
EPHA1_MOUSE2.829e-1429.19Ephrin type-A receptor 1 OS=Mus musculus GN=Epha1 ... [more]
DST1_DICDI2.829e-1426.61Serine/threonine-protein kinase dst1 OS=Dictyostel... [more]
BMX_MOUSE2.829e-1427.60Cytoplasmic tyrosine-protein kinase BMX OS=Mus mus... [more]
YES_CHICK3.694e-1430.77Tyrosine-protein kinase Yes OS=Gallus gallus GN=YE... [more]
Y9847_DICDI3.694e-1427.37Probable serine/threonine-protein kinase DDB_G0267... [more]
Y1061_ARATH3.694e-1429.60Probably inactive leucine-rich repeat receptor-lik... [more]
Y0019_DICDI3.694e-1426.84Probable serine/threonine-protein kinase DDB_G0278... [more]
ROR1_DROME3.694e-1428.50Tyrosine-protein kinase transmembrane receptor Ror... [more]
FGFR3_MOUSE3.694e-1432.98Fibroblast growth factor receptor 3 OS=Mus musculu... [more]

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Properties
Property NameValue
Genbank descriptionC31701B02EF StrClemenN Citrus clementina cDNA clone C31701B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923101 ID=FC923101; Name=FC923101; organism=Citrus clementina; type=EST; length=703bp
GAGTCTTTAACTCTCTACAAATTTCAAGATTTGAAAATTGCCACTGGGAG
TTTTAGTGAAGAGAATAGAATCCAGGGCTCTGTGTACCGGGGGTCTTTCA
AAGGTGATGATGCTGCCGTTAAGGTGATGAAGGGGGATGTCTCAAGCGAG
ATCAACATTTTGAAGAAGATCAATCACAGTAACATAATACGGCTTTCTGG
TTTTTGCGTTCATGAAGGAAACACCTACCTTGTTTATGAGTTCGCAGACA
ATGGTGCTCTCAGTGACTGGCTCCACTCTAACAGGTACCAGACTTCTGAT
AATCTAACATGGAAGCAGCGTGTTCAGATTGCTTACGATGTGGCTAATGC
TCTCAATTACCTCCACAAGTACACCAATCCCCCATATGTCCACAAGAACT
TGAAGACCAGTAATATTCTCTTGGATACCAACTTGAGAGCCAAGATTACT
AATTTCGGGTTGGCAAGAAGTGCAGAGAGCGATGAGCATGAGCAGGGGGG
TTACGGACTGCAATTGACAAGGCATGTGGTTGGTACTTATGGTTACATGG
CCCCAGAGTATATTGAAAATGGAGTGATCACACCTAAACTAGATGTTTTT
GCCTTCGGGGTTGTGGTATTGGAGCTCTTATCCGGAAGGGAAAGCTGTAC
TGGTGATCAGAATTGTGGAGCGGAATTGCTATATGCATCAATTAGTAGGG
TGC
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