FC923101

Overview
NameFC923101
Unique NameFC923101
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: FGFR2_XENLA (Fibroblast growth factor receptor 2 OS=Xenopus laevis GN=fgfr2 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.694e-14
Identity = 57/194 (29.38%), Postives = 95/194 (48.97%), Query Frame = 1
Query:  115 AVKVMK--------GDVSSEINILKKIN-HSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNR-----------YQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAES-DEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 633
            AVK++K         D+ SE+ ++K I  H NII L G C   G  Y++ E+A  G L  +L + R               + +T+K  V   Y +A  + YL    +   +H++L   N+L+  N   KI +FGLAR   + D +++   G    +       +MAPE + + V T + DV++FGV++ E+ +
Sbjct:  505 AVKMLKDNATEKDLADLVSEMEMMKMIGKHKNIINLLGACTQGGTLYVIVEYAAKGNLRQYLRARRPLEMEYSFDVTRVPDEQMTFKDLVSCTYQIARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTSNGRLPVK-------WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 688          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: FGFR2_NOTVI (Fibroblast growth factor receptor 2 OS=Notophthalmus viridescens GN=FGFR2 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.694e-14
Identity = 55/188 (29.26%), Postives = 94/188 (50.00%), Query Frame = 1
Query:  106 DDAAVKVMKGDVSSEINILKKIN-HSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQ-----------TSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 633
            DDA  K +  D+ SE+ ++K I  H NII L G C  +G  Y++ E+A  G L ++L + R               + +T+K  V   Y +A  + YL    +   +H++L   N+L+      KI +FGLAR   + ++ +     +L         +MAPE + + V T + DV++FGV++ E+ +
Sbjct:  429 DDATEKDLS-DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRTRRPPGMEYSFDINRIPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTETNVMKIADFGLARDINNIDYYKKTTNGRL------PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 606          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: FGFR1_XENLA (Fibroblast growth factor receptor 1 OS=Xenopus laevis GN=fgfr1 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.694e-14
Identity = 59/193 (30.57%), Postives = 97/193 (50.26%), Query Frame = 1
Query:  115 AVKVMKGDVS--------SEINILKKIN-HSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDN-----------LTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 633
            AVK++K D S        SE+ ++K I  H NII L G C  +G  Y++ E+   G L ++L + R    +            L++K  V  AY VA  ++YL    +   +H++L   N+L+  +   KI +FGLAR    D H    Y  + T +      +MAPE + + + T + DV++FGV++ E+ +
Sbjct:  506 AVKMLKSDASEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYTSKGNLREYLRARRPPAMEYCYNPTCVPDQLLSFKDLVSCAYQVARGMDYL---ASKKCIHRDLAARNVLVTEDNIMKIADFGLAR----DIHHIDYY--KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 689          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: EPHB4_HUMAN (Ephrin type-B receptor 4 OS=Homo sapiens GN=EPHB4 PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 3.694e-14
Identity = 63/207 (30.43%), Postives = 101/207 (48.79%), Query Frame = 1
Query:   37 IATGSFSEENRIQGSVYRGSFKGDDAAVKVMKGDVS--------SEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLS 633
            I  G F E  R  G +     K    A+K +KG  +        SE +I+ +  H NIIRL G   +     ++ EF +NGAL  +L  N  Q     T  Q V +   +A+ + YL + +   YVH++L   NIL+++NL  K+++FGL+R  E +  +   Y   L   +     + APE I     T   D +++G+V+ E++S
Sbjct:  621 IGAGEFGEVCR--GRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQ----FTVIQLVGMLRGIASGMRYLAEMS---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDP-TYTSSLGGKI--PIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 815          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: SSP_ARATH (Probable inactive receptor-like kinase SSP OS=Arabidopsis thaliana GN=SSP PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.825e-14
Identity = 61/224 (27.23%), Postives = 98/224 (43.75%), Query Frame = 1
Query:    7 LTLYKFQDLKIATGSFSEENRIQGS----VYRGSFK-GDDAAVKVMKGDVSSEINI-------LKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYIENGVITPKLDVFAFGVVVLELLSGRE 642
            LT + F  LK AT  FS EN +       V++G  + G   A+K       S+  +       + K+ H  ++ L G+C      +LV +F  N  L+  L   +YQT D   W  R+++AY VA AL+Y +      Y   NL    +L D +  A ++ FGL +   +D+                         I  G + P+  ++ FG V++ LLSG++
Sbjct:   35 LTKFSFSALKTATNHFSPENIVSDQTSDVVFKGRLQNGGFVAIKRFNNMAWSDPKLFLEEAQRVGKLRHKRLVNLIGYCCDGDKRFLVADFMANDTLAKRLFQRKYQTMD---WSIRLRVAYFVAEALDYCNTAGFASY--NNLSAYKVLFDEDGDACLSCFGLMKEINNDQ-------------------------ITTGSVNPENVIYRFGTVLVNLLSGKQ 228          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: RAF1_XENLA (RAF proto-oncogene serine/threonine-protein kinase OS=Xenopus laevis GN=raf1 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.825e-14
Identity = 62/215 (28.84%), Postives = 107/215 (49.77%), Query Frame = 1
Query:   34 KIATGSFSEENRIQGSVYRGSFKGDDAAVKVMKGD---------VSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLH--SNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYI---ENGVITPKLDVFAFGVVVLELLSG 636
            +I +GSF       G+VY+G + GD  AVK++K             +E+ +L+K  H NI+   G+   + N  +V ++ +  +L   LH    ++Q        Q + IA   A  ++YLH       +H+++K++NI L   L  KI +FGLA        +    G Q    + G+  +MAPE I   +N   + + DV+++G+V+ EL++G
Sbjct:  345 RIGSGSF-------GTVYKGKWHGD-VAVKILKVTDPTPEQLQAFRNEVAVLRKTRHVNILLFMGYMTKD-NLAIVTQWCEGSSLYYHLHVLDTKFQMF------QLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATV------KTRWSGSQQVEQLTGSILWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTG 535          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: RAF1_RAT (RAF proto-oncogene serine/threonine-protein kinase OS=Rattus norvegicus GN=Raf1 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.825e-14
Identity = 61/213 (28.64%), Postives = 104/213 (48.83%), Query Frame = 1
Query:   34 KIATGSFSEENRIQGSVYRGSFKGDDAAVKVMK---------GDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYI---ENGVITPKLDVFAFGVVVLELLSG 636
            +I +GSF       G+VY+G + GD  AVK++K             +E+ +L+K  H NI+   G+   + N  +V ++ +  +L   LH    +        Q + IA   A  ++YLH       +H+++K++NI L   L  KI +FGLA        +    G Q      G+  +MAPE I   +N   + + DV+++G+V+ EL++G
Sbjct:  354 RIGSGSF-------GTVYKGKWHGD-VAVKILKVVDPTPEQLQAFRNEVAVLRKTRHVNILLFMGYMTKD-NLAIVTQWCEGSSLYKHLHVQETK----FQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATV------KSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTG 544          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: RAF1_PONAB (RAF proto-oncogene serine/threonine-protein kinase OS=Pongo abelii GN=RAF1 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.825e-14
Identity = 61/213 (28.64%), Postives = 104/213 (48.83%), Query Frame = 1
Query:   34 KIATGSFSEENRIQGSVYRGSFKGDDAAVKVMK---------GDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYI---ENGVITPKLDVFAFGVVVLELLSG 636
            +I +GSF       G+VY+G + GD  AVK++K             +E+ +L+K  H NI+   G+   + N  +V ++ +  +L   LH    +        Q + IA   A  ++YLH       +H+++K++NI L   L  KI +FGLA        +    G Q      G+  +MAPE I   +N   + + DV+++G+V+ EL++G
Sbjct:  354 RIGSGSF-------GTVYKGKWHGD-VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKD-NLAIVTQWCEGSSLYKHLHVQETK----FQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATV------KSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTG 544          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: RAF1_HUMAN (RAF proto-oncogene serine/threonine-protein kinase OS=Homo sapiens GN=RAF1 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.825e-14
Identity = 61/213 (28.64%), Postives = 104/213 (48.83%), Query Frame = 1
Query:   34 KIATGSFSEENRIQGSVYRGSFKGDDAAVKVMK---------GDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYI---ENGVITPKLDVFAFGVVVLELLSG 636
            +I +GSF       G+VY+G + GD  AVK++K             +E+ +L+K  H NI+   G+   + N  +V ++ +  +L   LH    +        Q + IA   A  ++YLH       +H+++K++NI L   L  KI +FGLA        +    G Q      G+  +MAPE I   +N   + + DV+++G+V+ EL++G
Sbjct:  354 RIGSGSF-------GTVYKGKWHGD-VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKD-NLAIVTQWCEGSSLYKHLHVQETK----FQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATV------KSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTG 544          
BLAST of FC923101 vs. ExPASy Swiss-Prot
Match: RAF1_BOVIN (RAF proto-oncogene serine/threonine-protein kinase OS=Bos taurus GN=RAF1 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.825e-14
Identity = 61/213 (28.64%), Postives = 104/213 (48.83%), Query Frame = 1
Query:   34 KIATGSFSEENRIQGSVYRGSFKGDDAAVKVMK---------GDVSSEINILKKINHSNIIRLSGFCVHEGNTYLVYEFADNGALSDWLHSNRYQTSDNLTWKQRVQIAYDVANALNYLHKYTNPPYVHKNLKTSNILLDTNLRAKITNFGLARSAESDEHEQGGYGLQLTRHVVGTYGYMAPEYI---ENGVITPKLDVFAFGVVVLELLSG 636
            +I +GSF       G+VY+G + GD  AVK++K             +E+ +L+K  H NI+   G+   + N  +V ++ +  +L   LH    +        Q + IA   A  ++YLH       +H+++K++NI L   L  KI +FGLA        +    G Q      G+  +MAPE I   +N   + + DV+++G+V+ EL++G
Sbjct:  354 RIGSGSF-------GTVYKGKWHGD-VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKD-NLAIVTQWCEGSSLYKHLHVQETK----FQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATV------KSRWSGSQQVEQPTGSILWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTG 544          
The following BLAST results are available for this feature:
BLAST of FC923101 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FGFR2_XENLA3.694e-1429.38Fibroblast growth factor receptor 2 OS=Xenopus lae... [more]
FGFR2_NOTVI3.694e-1429.26Fibroblast growth factor receptor 2 OS=Notophthalm... [more]
FGFR1_XENLA3.694e-1430.57Fibroblast growth factor receptor 1 OS=Xenopus lae... [more]
EPHB4_HUMAN3.694e-1430.43Ephrin type-B receptor 4 OS=Homo sapiens GN=EPHB4 ... [more]
SSP_ARATH4.825e-1427.23Probable inactive receptor-like kinase SSP OS=Arab... [more]
RAF1_XENLA4.825e-1428.84RAF proto-oncogene serine/threonine-protein kinase... [more]
RAF1_RAT4.825e-1428.64RAF proto-oncogene serine/threonine-protein kinase... [more]
RAF1_PONAB4.825e-1428.64RAF proto-oncogene serine/threonine-protein kinase... [more]
RAF1_HUMAN4.825e-1428.64RAF proto-oncogene serine/threonine-protein kinase... [more]
RAF1_BOVIN4.825e-1428.64RAF proto-oncogene serine/threonine-protein kinase... [more]

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Properties
Property NameValue
Genbank descriptionC31701B02EF StrClemenN Citrus clementina cDNA clone C31701B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923101 ID=FC923101; Name=FC923101; organism=Citrus clementina; type=EST; length=703bp
GAGTCTTTAACTCTCTACAAATTTCAAGATTTGAAAATTGCCACTGGGAG
TTTTAGTGAAGAGAATAGAATCCAGGGCTCTGTGTACCGGGGGTCTTTCA
AAGGTGATGATGCTGCCGTTAAGGTGATGAAGGGGGATGTCTCAAGCGAG
ATCAACATTTTGAAGAAGATCAATCACAGTAACATAATACGGCTTTCTGG
TTTTTGCGTTCATGAAGGAAACACCTACCTTGTTTATGAGTTCGCAGACA
ATGGTGCTCTCAGTGACTGGCTCCACTCTAACAGGTACCAGACTTCTGAT
AATCTAACATGGAAGCAGCGTGTTCAGATTGCTTACGATGTGGCTAATGC
TCTCAATTACCTCCACAAGTACACCAATCCCCCATATGTCCACAAGAACT
TGAAGACCAGTAATATTCTCTTGGATACCAACTTGAGAGCCAAGATTACT
AATTTCGGGTTGGCAAGAAGTGCAGAGAGCGATGAGCATGAGCAGGGGGG
TTACGGACTGCAATTGACAAGGCATGTGGTTGGTACTTATGGTTACATGG
CCCCAGAGTATATTGAAAATGGAGTGATCACACCTAAACTAGATGTTTTT
GCCTTCGGGGTTGTGGTATTGGAGCTCTTATCCGGAAGGGAAAGCTGTAC
TGGTGATCAGAATTGTGGAGCGGAATTGCTATATGCATCAATTAGTAGGG
TGC
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