FC923103

Overview
NameFC923103
Unique NameFC923103
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length717
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14385 contig Ccv1_Contig14385:1..717. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923103 vs. ExPASy Swiss-Prot
Match: ST1B1_CANFA (Sulfotransferase family cytosolic 1B member 1 OS=Canis familiaris GN=SULT1B1 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.306e-11
Identity = 41/120 (34.17%), Postives = 63/120 (52.50%), Query Frame = 1
Query:  280 KHFQAQDSDILLVTTPKAGTTWLKAITFAIVNRLRYVDNPCNHPLLTNNPHELVPFIELKL--YVDNQVPDLTTLTSPRLFATHLPFVSLPASVKDSSSACKLVYLCRNPKDIFVSLWHF 633
            + F ++  DI++ T PK+GTTW+  I   ++N        C    +T      VP +E+ +     + +  L    SPRL  THLP   LP S  +++  CK++YL RN KD+ VS +HF
Sbjct:   32 EQFHSRPDDIIIATYPKSGTTWVSEIVDMVLNNGDV--EKCKRDFITVK----VPMLEMAVPGLRTSGIEQLEKNPSPRLVKTHLPIALLPKSFWENN--CKMIYLARNAKDVAVSYYHF 143          
BLAST of FC923103 vs. ExPASy Swiss-Prot
Match: ST1S1_DANRE (Cytosolic sulfotransferase 1 OS=Danio rerio GN=sult1st1 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.011e-11
Identity = 50/122 (40.98%), Postives = 69/122 (56.56%), Query Frame = 1
Query:  280 KHFQAQDSDILLVTTPKAGTTWLKAITFAIVNRLRYVDN-PCNHPLLTNNP-HELVPFIELKLYVDNQVPDL--TTLTSPRLFATHLPFVSLPASVKDSSSACKLVYLCRNPKDIFVSLWHF 633
            K+FQA+  DIL+ T PKAGTTW+      I++ L + +N P  H   T+ P +  VPF+E    V     +L     TSPRL  THLP   +P S  + +S  ++VY+ RN KD  VS +HF
Sbjct:   35 KNFQARPDDILIATYPKAGTTWVS----YILDLLYFGENAPEEH---TSQPIYMRVPFLESCFKVIASGTELADNMTTSPRLIKTHLPVQLIPKSFWEQNS--RVVYVARNAKDNVVSYFHF 147          
BLAST of FC923103 vs. ExPASy Swiss-Prot
Match: ST1E3_RAT (Estrogen sulfotransferase, isoform 3 OS=Rattus norvegicus GN=Ste PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.011e-11
Identity = 43/117 (36.75%), Postives = 62/117 (52.99%), Query Frame = 1
Query:  286 FQAQDSDILLVTTPKAGTTWLKAITFAIVNRLRYVDNPCNHPLLTNNPHELVPFIELKLY-VDNQVPDLTTLTSPRLFATHLPFVSLPASVKDSSSACKLVYLCRNPKDIFVSLWHF 633
            F A+  D+L+VT PK+G+TW+  I   I          C    L N     +P +E +   + N +  L    SPR+  THLP   LPAS  + +  CK++YLCRN KD+ VS ++F
Sbjct:   34 FLARPDDLLIVTYPKSGSTWISEIVDMIYKEGDV--EKCKEDALFNR----IPDLECRNEDLINGIKQLKEKESPRIVKTHLPAKLLPASFWEKN--CKIIYLCRNAKDVVVSYYYF 142          
BLAST of FC923103 vs. ExPASy Swiss-Prot
Match: ST1E1_RAT (Estrogen sulfotransferase, isoform 1 OS=Rattus norvegicus GN=Sult1e1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.011e-11
Identity = 43/117 (36.75%), Postives = 62/117 (52.99%), Query Frame = 1
Query:  286 FQAQDSDILLVTTPKAGTTWLKAITFAIVNRLRYVDNPCNHPLLTNNPHELVPFIELKLY-VDNQVPDLTTLTSPRLFATHLPFVSLPASVKDSSSACKLVYLCRNPKDIFVSLWHF 633
            F A+  D+L+VT PK+G+TW+  I   I          C    L N     +P +E +   + N +  L    SPR+  THLP   LPAS  + +  CK++YLCRN KD+ VS ++F
Sbjct:   34 FLARPDDLLIVTYPKSGSTWISEIVDMIYKEGDV--EKCKEDALFNR----IPDLECRNEDLINGIKQLKEKESPRIVKTHLPAKLLPASFWEKN--CKIIYLCRNAKDVVVSYYYF 142          
BLAST of FC923103 vs. ExPASy Swiss-Prot
Match: ST2S2_DANRE (Cytosolic sulfotransferase 2 OS=Danio rerio GN=sult1st2 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.933e-11
Identity = 48/121 (39.67%), Postives = 65/121 (53.72%), Query Frame = 1
Query:  280 KHFQAQDSDILLVTTPKAGTTWLKAITFAIVNRLRYVDNPCNHPLLTNNPHELVPFIEL---KLYVDNQVPDLTTLTSPRLFATHLPFVSLPASVKDSSSACKLVYLCRNPKDIFVSLWHF 633
            K+FQA+  DIL+ T PKAGTTW+  I       L Y  N       +   +  VPF+E+    L +  ++ D T  TSPR   THLP   +P S  + +S  K+VY+ RN KD  VS +HF
Sbjct:   37 KNFQARPDDILIATYPKAGTTWVSYIL-----DLLYFGNESPERQTSQPIYMRVPFLEMCFQGLPLGTELAD-TLPTSPRPIKTHLPVQLVPKSFWEQNS--KVVYVARNAKDNAVSYFHF 149          
BLAST of FC923103 vs. ExPASy Swiss-Prot
Match: ST1B1_HUMAN (Sulfotransferase family cytosolic 1B member 1 OS=Homo sapiens GN=SULT1B1 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 3.933e-11
Identity = 43/120 (35.83%), Postives = 64/120 (53.33%), Query Frame = 1
Query:  280 KHFQAQDSDILLVTTPKAGTTWLKAITFAIVNRLRYVDNPCNHPLLTNNPHELVPFIELKL--YVDNQVPDLTTLTSPRLFATHLPFVSLPASVKDSSSACKLVYLCRNPKDIFVSLWHF 633
            + F ++  DI++ T PK+GTTW+  I   I+N        C    +T    E VP +E+ L     + +  L    SPR+  THLP   LP S  +++  CK++YL RN KD+ VS +HF
Sbjct:   32 EQFHSRPDDIVIATYPKSGTTWVSEIIDMILNDGDI--EKCKRGFIT----EKVPMLEMTLPGLRTSGIEQLEKNPSPRIVKTHLPTDLLPKSFWENN--CKMIYLARNAKDVSVSYYHF 143          
BLAST of FC923103 vs. ExPASy Swiss-Prot
Match: ST1B1_CHICK (Sulfotransferase family cytosolic 1B member 1 OS=Gallus gallus GN=SULT1B1 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.136e-11
Identity = 44/123 (35.77%), Postives = 65/123 (52.85%), Query Frame = 1
Query:  283 HFQAQDSDILLVTTPKAGTTWLKAITFAIVNRLRYVDNP--CNHPLLTNNPHELVPFIELKLYVDNQVP----DLTTLTSPRLFATHLPFVSLPASVKDSSSACKLVYLCRNPKDIFVSLWHF 633
            +FQ++  DI++ T PK+GTTW+      IV+ +    +P  C    + N     VP +E       Q+P     L  + SPR+  TH+P   LP S  D S  CK++Y+ RN KD+ VS +HF
Sbjct:   33 NFQSRPDDIVVATFPKSGTTWIS----EIVDMILQGGDPKKCKRDAIVNR----VPMLEFA--APGQMPAGTEQLENMPSPRIIKTHIPADILPKSFWDKS--CKMIYVGRNAKDVAVSYYHF 143          
BLAST of FC923103 vs. ExPASy Swiss-Prot
Match: ST1S3_DANRE (Cytosolic sulfotransferase 3 OS=Danio rerio GN=sult1st3 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.708e-11
Identity = 49/123 (39.84%), Postives = 63/123 (51.22%), Query Frame = 1
Query:  280 KHFQAQDSDILLVTTPKAGTTWLKAITFAIVNRLRYVDNPCNHPLLTNNPHELVPFIELKLYVDNQVPDLTTL-----TSPRLFATHLPFVSLPASVKDSSSACKLVYLCRNPKDIFVSLWHF 633
            K+FQA+  DIL+ T PKAGTTW+  I       L Y  N       +   +  VPF+E        +P  T L     TSPRL  THLP   +P S  + +S  K+VY+ RN KD  VS +HF
Sbjct:   37 KNFQARPDDILIATYPKAGTTWVSYIL-----DLLYFGNESPERQTSQPIYMRVPFLEACF---EGIPFGTELADNLPTSPRLIKTHLPVQLVPKSFWEQNS--KVVYVARNAKDNAVSYFHF 149          
BLAST of FC923103 vs. ExPASy Swiss-Prot
Match: ST1E1_CAVPO (Estrogen sulfotransferase OS=Cavia porcellus GN=SULT1E1 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.708e-11
Identity = 42/120 (35.00%), Postives = 63/120 (52.50%), Query Frame = 1
Query:  286 FQAQDSDILLVTTPKAGTTWLKAITFAIVNRLRYVD---NPCNHPLLTNNPHELVPFIELKL-YVDNQVPDLTTLTSPRLFATHLPFVSLPASVKDSSSACKLVYLCRNPKDIFVSLWHF 633
            FQA+  D+++   PK+GTTW+  +   I     Y +     C    + N     VPF+E +   + N V  L  + SPR+  THLP   LPAS  +    CK++ +CRN KD+ VS ++F
Sbjct:   35 FQARPDDLVIAAYPKSGTTWISEVVCMI-----YAEGDVKKCRQDAIFNR----VPFLECRNDKMMNGVKQLEEMNSPRIIKTHLPPRLLPASFWE--KRCKMICICRNAKDVAVSYYYF 143          
The following BLAST results are available for this feature:
BLAST of FC923103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
ST1B1_CANFA2.306e-1134.17Sulfotransferase family cytosolic 1B member 1 OS=C... [more]
ST1S1_DANRE3.011e-1140.98Cytosolic sulfotransferase 1 OS=Danio rerio GN=sul... [more]
ST1E3_RAT3.011e-1136.75Estrogen sulfotransferase, isoform 3 OS=Rattus nor... [more]
ST1E1_RAT3.011e-1136.75Estrogen sulfotransferase, isoform 1 OS=Rattus nor... [more]
ST2S2_DANRE3.933e-1139.67Cytosolic sulfotransferase 2 OS=Danio rerio GN=sul... [more]
ST1B1_HUMAN3.933e-1135.83Sulfotransferase family cytosolic 1B member 1 OS=H... [more]
ST1B1_CHICK5.136e-1135.77Sulfotransferase family cytosolic 1B member 1 OS=G... [more]
ST1S3_DANRE6.708e-1139.84Cytosolic sulfotransferase 3 OS=Danio rerio GN=sul... [more]
ST1E1_CAVPO6.708e-1135.00Estrogen sulfotransferase OS=Cavia porcellus GN=SU... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31701B04EF StrClemenN Citrus clementina cDNA clone C31701B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923103 ID=FC923103; Name=FC923103; organism=Citrus clementina; type=EST; length=717bp
GGATCAAATTCAGCACAAGTAACTCCCCTGCTCAGCGCACAACCAAGACC
CCAAGTTCTCAGGTATATTCAGGCTTCGCCAATCATGCCCACTTCTGTGC
CAACTCAACCTTCAGCTGTTTCCCTTCCTAAATACTTGCAAGAAGACGAA
CTTACACAAGAATGCAGGGAGTTGATCTCCTCCCTTCCCGCAGAAACGGG
TTGGGTTGTCGATCATCTCTATCAATACCAAGGCTTTTGGCACACAAGCA
GGGAGTTACAAGGTGTTCTTGCTTGTCAAAAACATTTCCAAGCTCAGGAT
TCTGATATTCTCCTTGTCACCACTCCAAAAGCAGGCACCACTTGGCTGAA
GGCCATAACGTTTGCCATAGTCAACCGTTTGCGTTATGTTGATAATCCCT
GTAACCACCCTTTGCTTACCAACAATCCTCATGAGCTTGTACCCTTCATT
GAGCTTAAATTATATGTTGATAATCAGGTTCCTGACCTCACCACCTTGAC
CTCTCCAAGGCTCTTTGCAACCCACTTGCCCTTTGTCTCATTGCCTGCAT
CTGTTAAAGATTCATCATCAGCTTGCAAACTTGTGTATTTGTGTAGGAAC
CCTAAGGACATTTTTGTGTCGCTCTGGCACTTTACCACAAGCTGAGACCC
GAAGAAAGGGTACAATTCTCTTGAAGAACTTTTGATAGGTTTTGCAGGGG
AGTGAGTTTGTATGGGC
back to top