FC923105
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923105 vs. ExPASy Swiss-Prot
Match: NDHN_PROM1 (NAD(P)H-quinone oxidoreductase subunit N OS=Prochlorococcus marinus (strain NATL1A) GN=ndhN PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.385e-12 Identity = 45/141 (31.91%), Postives = 70/141 (49.65%), Query Frame = 3 Query: 252 RWLSDVEKHKAIAIYTPHEXXXXXXXXXXXXXXXXXXXDLSARGLGDPETTLTKVYPVCPAHVGKQPIARWYFPPEVDY---RLAALPPSAKGLVVWIIEAKVLSKSELQFLALLPTLRPKVRVIAECGNWRKFMWKPXQE 665 ++ +D+E +AI +P E SARGLGDP LT+++ + P H+G Q + R EV +L L K LV+W++E +VLSKSEL ++ L P+++++ E G R W+P E Sbjct: 9 KFRTDLESFGCLAILSPLEGGAETRLLRRLRASGYQTQITSARGLGDPVVFLTQLHGIRPPHLGHQNVGRNGALGEVQQVIPQLNELLVEDKPLVLWLLEGQVLSKSELLAISNLCQKEPRIKIVIEMGGARSIKWQPLNE 149
BLAST of FC923105 vs. ExPASy Swiss-Prot
Match: NDHN_PROMT (NAD(P)H-quinone oxidoreductase subunit N OS=Prochlorococcus marinus (strain NATL2A) GN=ndhN PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.313e-12 Identity = 45/141 (31.91%), Postives = 69/141 (48.94%), Query Frame = 3 Query: 252 RWLSDVEKHKAIAIYTPHEXXXXXXXXXXXXXXXXXXXDLSARGLGDPETTLTKVYPVCPAHVGKQPIARWYFPPEVDY---RLAALPPSAKGLVVWIIEAKVLSKSELQFLALLPTLRPKVRVIAECGNWRKFMWKPXQE 665 ++ +D+E +AI +P E SARGLGDP LT+++ + P H+G Q + R EV +L L K LV+W++E +VLSKSEL + L P+++++ E G R W+P E Sbjct: 9 KFRTDLESFGCLAILSPLEGGAETRLLRRLRASGYQTQVTSARGLGDPVVFLTQLHGIRPPHLGHQNVGRNGALGEVQQVIPQLNELLVEDKPLVLWLLEGQVLSKSELLAINNLCQKEPRIKIVIEMGGARSIKWQPLNE 149
BLAST of FC923105 vs. ExPASy Swiss-Prot
Match: NDHN_SYNS3 (NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus sp. (strain CC9311) GN=ndhN PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.939e-12 Identity = 39/102 (38.24%), Postives = 58/102 (56.86%), Query Frame = 3 Query: 372 SARGLGDPETTLTKVYPVCPAHVGKQPIARWYFPPEVDYRLAALPPSAKG---LVVWIIEAKVLSKSELQFLALLPTLRPKVRVIAECGNWRKFMWKPXQEI 668 SARGLGDPE L + + + P H+G Q + R EV + L S G +V+W++E +VLS+SEL L L P+++V+ E G R W+P +E+ Sbjct: 49 SARGLGDPEVFLFQKHGIRPPHLGHQSVGRGAAVGEVQEVMPLLGESMLGTKPVVLWLLEGQVLSRSELSALCDLCRREPRLKVVVEMGGARSLRWQPLKEL 150
BLAST of FC923105 vs. ExPASy Swiss-Prot
Match: NDHN_PROMS (NAD(P)H-quinone oxidoreductase subunit N OS=Prochlorococcus marinus (strain AS9601) GN=ndhN PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.184e-11 Identity = 44/136 (32.35%), Postives = 67/136 (49.26%), Query Frame = 3 Query: 261 SDVEKHKAIAIYTPHEXXXXXXXXXXXXXXXXXXXDLSARGLGDPETTLTKVYPVCPAHVGKQPIARWYFPPEVDYRLAALPP----SAKGLVVWIIEAKVLSKSELQFLALLPTLRPKVRVIAECGNWRKFMWKP 656 +D++ +K +AI+ P E SARGLGDPE L K++ V P H+G Q + R EV + + K ++W++E +VLS+SEL+ L + T K+ ++ E G RK WKP Sbjct: 12 NDLKTNKCLAIFAPLEGGYETRLLRRMRAKGFKTFITSARGLGDPEVFLLKLHGVRPPHLGHQSVGRNGALGEVQQVIPQASELFNENDKNKLLWLLEGQVLSQSELESLIEICTNDNKLTIVVEMGGSRKLEWKP 147
BLAST of FC923105 vs. ExPASy Swiss-Prot
Match: NDHN_PROM9 (NAD(P)H-quinone oxidoreductase subunit N OS=Prochlorococcus marinus (strain MIT 9312) GN=ndhN PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.184e-11 Identity = 44/136 (32.35%), Postives = 67/136 (49.26%), Query Frame = 3 Query: 261 SDVEKHKAIAIYTPHEXXXXXXXXXXXXXXXXXXXDLSARGLGDPETTLTKVYPVCPAHVGKQPIARWYFPPEVDYRLAALPP----SAKGLVVWIIEAKVLSKSELQFLALLPTLRPKVRVIAECGNWRKFMWKP 656 +D++ +K +AI+ P E SARGLGDPE L K++ V P H+G Q + R EV + + K ++W++E +VLS+SEL+ L + T K+ ++ E G RK WKP Sbjct: 12 NDLKTNKCLAIFAPLEGGYETRLLRRMRAKGFKTFITSARGLGDPEVFLLKLHGVRPPHLGHQSVGRNGALGEVQQVIPQASELFNENDKNKLLWLLEGQVLSQSELESLIEICTNDNKLSIVVEMGGSRKLEWKP 147
BLAST of FC923105 vs. ExPASy Swiss-Prot
Match: NDHN_PROM2 (NAD(P)H-quinone oxidoreductase subunit N OS=Prochlorococcus marinus (strain MIT 9215) GN=ndhN PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.184e-11 Identity = 44/136 (32.35%), Postives = 67/136 (49.26%), Query Frame = 3 Query: 261 SDVEKHKAIAIYTPHEXXXXXXXXXXXXXXXXXXXDLSARGLGDPETTLTKVYPVCPAHVGKQPIARWYFPPEVDYRLAALPP----SAKGLVVWIIEAKVLSKSELQFLALLPTLRPKVRVIAECGNWRKFMWKP 656 +D++ +K +AI+ P E SARGLGDPE L K++ V P H+G Q + R EV + + K ++W++E +VLS+SEL+ L + T K+ ++ E G RK WKP Sbjct: 12 NDLKTNKCLAIFAPLEGGYETRLLRRMRAKGFKTFITSARGLGDPEVFLLKLHGVRPPHLGHQSVGRNGALGEVQQVIPQASELFNENDKNKLLWLLEGQVLSQSELESLIEICTNDNKLTIVVEMGGSRKLEWKP 147
BLAST of FC923105 vs. ExPASy Swiss-Prot
Match: NDHN_SYNSC (NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus sp. (strain CC9605) GN=ndhN PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.546e-11 Identity = 44/134 (32.84%), Postives = 64/134 (47.76%), Query Frame = 3 Query: 264 DVEKHKAIAIYTPHEXXXXXXXXXXXXXXXXXXXDLSARGLGDPETTLTKVYPVCPAHVGKQPIARWYFPPEVDY---RLAALPPSAKGLVVWIIEAKVLSKSELQFLALLPTLRPKVRVIAECGNWRKFMWKP 656 D+E + +A+ P E SARGLGDPE LT+ + + P H+G Q + R EV +L L S + +W++E +VLS+SEL L L P++R+I E G R W+P Sbjct: 13 DLEANGCLAVQAPLEGGAETRLLRRLRGAGYSTRMTSARGLGDPEVFLTQKHGIRPPHLGHQSVGRGAAVGEVQEVAPQLGDLFESDAPVALWLLEGQVLSRSELLSLCDLCKREPRLRIIVEMGGARSLKWEP 146
BLAST of FC923105 vs. ExPASy Swiss-Prot
Match: NDHN_SYNR3 (NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus sp. (strain RCC307) GN=ndhN PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.546e-11 Identity = 43/134 (32.09%), Postives = 63/134 (47.01%), Query Frame = 3 Query: 264 DVEKHKAIAIYTPHEXXXXXXXXXXXXXXXXXXXDLSARGLGDPETTLTKVYPVCPAHVGKQPIARWYFPPEVDYRLAALPP---SAKGLVVWIIEAKVLSKSELQFLALLPTLRPKVRVIAECGNWRKFMWKP 656 D+E+ +A+A+Y P E SARGLGDPE L ++ V P H+G + R EV + L P S +V+W++E +VLS +E L L P++ ++ E G R WKP Sbjct: 13 DLERERALAVYAPLEGGAETRLLRRLRAAGYRTELTSARGLGDPEAFLLGLHGVRPPHLGHHCVGRDAAVGEVQLVMPQLGPALASGAPVVLWMLEGQVLSSAEQASLLALCEREPRLHMVLELGGSRSLRWKP 146
BLAST of FC923105 vs. ExPASy Swiss-Prot
Match: NDHN_PROMP (NAD(P)H-quinone oxidoreductase subunit N OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=ndhN PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.546e-11 Identity = 43/135 (31.85%), Postives = 67/135 (49.63%), Query Frame = 3 Query: 261 SDVEKHKAIAIYTPHEXXXXXXXXXXXXXXXXXXXDLSARGLGDPETTLTKVYPVCPAHVGKQPIARWYFPPEVDYRLAALPP----SAKGLVVWIIEAKVLSKSELQFLALLPTLRPKVRVIAECGNWRKFMWK 653 +D+ K+K +A++ P E SARGLGDPE L K++ + P H+G Q I R EV + + K ++W++E +VLS+SEL+ L + T K++++ E G RK WK Sbjct: 12 NDLNKNKCLAMFAPLEGGYETRLLRRMRAKGFKTYITSARGLGDPEVFLLKLHGIRPPHLGHQSIGRNGALGEVQQVIPQASELFNENDKDKLLWLLEGQVLSQSELESLIKICTSDNKLKIVVEMGGSRKLEWK 146
BLAST of FC923105 vs. ExPASy Swiss-Prot
Match: NDHN_SYNS9 (NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus sp. (strain CC9902) GN=ndhN PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.498e-11 Identity = 42/138 (30.43%), Postives = 65/138 (47.10%), Query Frame = 3 Query: 264 DVEKHKAIAIYTPHEXXXXXXXXXXXXXXXXXXXDLSARGLGDPETTLTKVYPVCPAHVGKQPIARWYFPPEVDYRLAALPPSAKG---LVVWIIEAKVLSKSELQFLALLPTLRPKVRVIAECGNWRKFMWKPXQEI 668 D+E + +A++ P E SARGLGDPE LT+ + + P H+G + R EV + + G + +WI+E +VLS+SEL L L P++R+I E G R W+P + + Sbjct: 17 DLEANGCLAVHAPLEGGAETRLLRRLRGAGYRTRMTSARGLGDPEVFLTQKHGIRPPHLGHNCVGRGAAVGEVQQVVPLIGDLLDGDDSVALWILEGQVLSRSELLSLCDLCKREPRLRIIVEMGGARSLRWQPMKAL 154 The following BLAST results are available for this feature:
BLAST of FC923105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923105 ID=FC923105; Name=FC923105; organism=Citrus clementina; type=EST; length=669bpback to top |