FC923108

Overview
NameFC923108
Unique NameFC923108
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length636
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923108 vs. ExPASy Swiss-Prot
Match: Y5182_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51820 OS=Arabidopsis thaliana GN=At1g51820 PE=2 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.070e-43
Identity = 91/192 (47.40%), Postives = 128/192 (66.67%), Query Frame = 2
Query:   41 VAVKTLNHGGLQGHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLF-RKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEW 613
            VAVK L+H   QG+K++ AEV  L  + H NLV LVGYC E D   L+YE+M  G L+ H+   +    L W  R+KI + +A+GL +LH   + P+++RD KT+NILL+  + AKL+DFGL++    +G+THVST V GT GY  PEY  T  LT KSDVYSFG++LLE++T R  +D++R   + ++ EW
Sbjct:  603 VAVKILSHSSSQGYKQFKAEVELLLRVHHKNLVGLVGYCDEGDNLALIYEYMANGDLKEHMSGTRNRFILNWGTRLKIVIESAQGLEYLHNGCKPPMVHRDVKTTNILLNEHFEAKLADFGLSRSFLIEGETHVSTVVAGTPGYLDPEYHRTNWLTEKSDVYSFGILLLEIITNRHVIDQSRE--KPHIGEW 792          
BLAST of FC923108 vs. ExPASy Swiss-Prot
Match: Y2214_ARATH (Probable receptor-like protein kinase At2g21480 OS=Arabidopsis thaliana GN=At2g21480 PE=2 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.070e-43
Identity = 92/195 (47.18%), Postives = 123/195 (63.08%), Query Frame = 2
Query:   32 GLTVAVKTLNHGGLQGHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWA 616
            G  VA+K  N    QG  E+  E+  L  L H +LV L+GYC E+ + +LVYE+M  G   +HL+ K   PL W  R++I +GAA+GL +LH    + +I+RD K++NILLD    AK++DFGL+KD    G+ HVST V G++GY  PEY     LT KSDVYSFGVVLLE L  R +++   P  + NL EWA
Sbjct:  547 GTQVAIKRGNPQSEQGITEFHTEIQMLSKLRHRHLVSLIGYCDENAEMILVYEYMSNGPFRDHLYGKNLSPLTWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKSTNILLDEALVAKVADFGLSKDV-AFGQNHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLLEALCARPAINPQLPREQVNLAEWA 740          
BLAST of FC923108 vs. ExPASy Swiss-Prot
Match: Y5487_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g48740 OS=Arabidopsis thaliana GN=At5g48740 PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.397e-43
Identity = 95/201 (47.26%), Postives = 126/201 (62.69%), Query Frame = 2
Query:   32 GLTVAVKTLNHGGLQGHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLF--RKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHL 628
            G  VAVK        G   ++ EV+ L  + H NLV   G+C E  +++LVYE++  GSL +HL+  R     L W  R+K+A+ AAKGL +LH  +E  +I+RD K+SNILLD D NAK+SDFGL+K   +   +H++T V GT GY  PEY  T  LT KSDVYSFGVVLLE++ GR  +  +      NLV WARP+L
Sbjct:  628 GKQVAVKVRFDRTQLGADSFINEVHLLSQIRHQNLVSFEGFCYEPKRQILVYEYLSGGSLADHLYGPRSKRHSLNWVSRLKVAVDAAKGLDYLHNGSEPRIIHRDVKSSNILLDKDMNAKVSDFGLSKQFTKADASHITTVVKGTAGYLDPEYYSTLQLTEKSDVYSFGVVLLELICGREPLSHSGSPDSFNLVLWARPNL 828          
BLAST of FC923108 vs. ExPASy Swiss-Prot
Match: Y1105_ARATH (Probable receptor-like protein kinase At1g11050 OS=Arabidopsis thaliana GN=At1g11050 PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 1.824e-43
Identity = 94/204 (46.08%), Postives = 131/204 (64.22%), Query Frame = 2
Query:   32 GLTVAVKTLNHGGLQGHKEWLAEVNFLGNLLHPNLVKLVGYCIEDD----QRLLVYEFMPRGSLENHLFRKGS---LPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHN--LVEWA 616
            G  +AVK +     QG  E+  EV  + NL H NLV L G  + DD    QR LVY++M  G+L++HLF +G    +PL W  R  I L  AKGLA+LH   +  + +RD K +NILLD D  A+++DFGLAK + E G++H++TRV GT+GY APEY + G LT KSDVYSFGVV+LE++ GR+++D +     +   + +WA
Sbjct:  317 GSVIAVKKVIESEFQGDAEFRNEVEIISNLKHRNLVPLRGCSMVDDDSESQRYLVYDYMSNGNLDDHLFPRGETTKMPLSWPQRKSIILDVAKGLAYLHYGVKPAIYHRDIKGTNILLDVDMRARVADFGLAKQSRE-GESHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLSTSGSPNTFLITDWA 519          
BLAST of FC923108 vs. ExPASy Swiss-Prot
Match: FERON_ARATH (Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana GN=FER PE=1 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 1.824e-43
Identity = 89/192 (46.35%), Postives = 123/192 (64.06%), Query Frame = 2
Query:   41 VAVKTLNHGGLQGHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWA 616
            VA+K  N    QG  E+  E+  L  L H +LV L+GYC E+ + +LVY++M  G++  HL++  +  LPW  R++I +GAA+GL +LH  A+  +I+RD KT+NILLD  + AK+SDFGL+K  P    THVST V G++GY  PEY     LT KSDVYSFGVVL E L  R +++      + +L EWA
Sbjct:  562 VAIKRGNPMSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAHGTMREHLYKTQNPSLPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTLDHTHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCARPALNPTLAKEQVSLAEWA 753          
BLAST of FC923108 vs. ExPASy Swiss-Prot
Match: CRK3_ARATH (Cysteine-rich receptor-like protein kinase 3 OS=Arabidopsis thaliana GN=CRK3 PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 1.824e-43
Identity = 92/180 (51.11%), Postives = 125/180 (69.44%), Query Frame = 2
Query:   32 GLTVAVKTLNHGGLQGHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLF-RKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRS 568
            G TVAVK L     Q    +  EVN +  + H NLVKL+G  I   + LLVYE++   SL ++LF RK   PL W+ R KI LG A+G+A+LHEE+   +I+RD K SNILL+ D+  +++DFGLA+  PED KTH+ST + GT GY APEYV+ G LT K+DVYSFGV+++E++TG+R+
Sbjct:  345 GKTVAVKRLFFNTKQWVDHFFNEVNLISQVDHKNLVKLLGCSITGPESLLVYEYIANQSLHDYLFVRKDVQPLNWAKRFKIILGTAEGMAYLHEESNLRIIHRDIKLSNILLEDDFTPRIADFGLARLFPED-KTHISTAIAGTLGYMAPEYVVRGKLTEKADVYSFGVLMIEVITGKRN 523          
BLAST of FC923108 vs. ExPASy Swiss-Prot
Match: BRL3_ARATH (Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana GN=BRL3 PE=1 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.383e-43
Identity = 95/204 (46.57%), Postives = 133/204 (65.20%), Query Frame = 2
Query:   20 KPGTGLTVAVKTLNHGGLQGHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLF---RKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVM-GTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWAR 619
            K   G  VA+K L     QG +E++AE+  +G + H NLV L+GYC   ++RLLVYE+M  GSLE  L    +KG + L WS R KIA+GAA+GLAFLH      +I+RD K+SN+LLD D+ A++SDFG+A+       TH+S   + GT GY  PEY  +   T+K DVYS+GV+LLE+L+G++ +D      ++NLV WA+
Sbjct:  876 KLADGSVVAIKKLIQVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKYGSLETVLHEKTKKGGIFLDWSARKKIAIGAARGLAFLHHSCIPHIIHRDMKSSNVLLDQDFVARVSDFGMAR-LVSALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGKKPIDPEEFGEDNNLVGWAK 1078          
BLAST of FC923108 vs. ExPASy Swiss-Prot
Match: ACCR4_ARATH (Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana GN=CCR4 PE=1 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.383e-43
Identity = 91/202 (45.05%), Postives = 128/202 (63.37%), Query Frame = 2
Query:   29 TGLTVAVKTLNHGGLQGHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAP--EDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHL 628
            T  T++  T+ H        ++ E+  +  L H NLV+L+G+  + ++R+LVYE+M  GSL +HL      PL W  R+ IAL AA+G+ +LHE    PVI+RD K+SNILLDA + AK+SDFGL++  P  ED  +H+S    GT GY  PEY     LT+KSDVYSFGVVLLE+L+G +++  N      NLVE+  P++
Sbjct:  476 TNPTLSGTTMRHRRADKDSAFVNELESMSRLNHKNLVRLLGFYEDTEERILVYEYMKNGSLADHLHNPQFDPLSWQTRLMIALDAARGIQYLHEFIVPPVIHRDIKSSNILLDATWTAKVSDFGLSQMGPTEEDDVSHLSLHAAGTLGYIDPEYYKFQQLTTKSDVYSFGVVLLELLSGHKAIHNNEDENPRNLVEYVVPYI 677          
BLAST of FC923108 vs. ExPASy Swiss-Prot
Match: Y2899_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g28990 OS=Arabidopsis thaliana GN=At2g28990 PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.112e-43
Identity = 93/192 (48.44%), Postives = 123/192 (64.06%), Query Frame = 2
Query:   41 VAVKTLNHGGLQGHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRK-GSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEW 613
            VAVK L+    QG+K + AEV  L  + H NLV LVGYC E +   L+YE+MP G L+ HL  K G   L W  R+KI L AA GL +LH     P+++RD KT+NILLD    AKL+DFGL++  P   + +VST V GT GY  PEY  T  LT KSD+YSFG+VLLE+++ R  + ++R   + ++VEW
Sbjct:  602 VAVKLLSQSSSQGYKHFKAEVELLMRVHHINLVSLVGYCDEGEHLALIYEYMPNGDLKQHLSGKHGGFVLSWESRLKIVLDAALGLEYLHTGCVPPMVHRDIKTTNILLDQHLQAKLADFGLSRSFPIGNEKNVSTVVAGTPGYLDPEYYQTNWLTEKSDIYSFGIVLLEIISNRPIIQQSRE--KPHIVEW 791          
BLAST of FC923108 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 4.064e-43
Identity = 92/192 (47.92%), Postives = 127/192 (66.15%), Query Frame = 2
Query:   41 VAVKTLNHGGLQGHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSL-PLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEW 613
            VAVK L+    QG+K++ AEV+ L  + H NLV LVGYC E    +L+YE+M  G+L+ HL  + S  PL W  R++IA   A+GL +LH   + P+I+RD K+ NILLD ++ AKL DFGL++  P   +THVST V G+ GY  PEY  T  LT KSDV+SFGVVLLE++T +  +D+ R   + ++ EW
Sbjct:  616 VAVKVLSESSAQGYKQFKAEVDLLLRVHHINLVTLVGYCDEGQHLVLIYEYMSNGNLKQHLSGENSRSPLSWENRLRIAAETAQGLEYLHIGCKPPMIHRDIKSMNILLDNNFQAKLGDFGLSRSFPVGSETHVSTNVAGSPGYLDPEYYRTNWLTEKSDVFSFGVVLLEIITSQPVIDQTRE--KSHIGEW 805          
The following BLAST results are available for this feature:
BLAST of FC923108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y5182_ARATH1.070e-4347.40Probable LRR receptor-like serine/threonine-protei... [more]
Y2214_ARATH1.070e-4347.18Probable receptor-like protein kinase At2g21480 OS... [more]
Y5487_ARATH1.397e-4347.26Probable LRR receptor-like serine/threonine-protei... [more]
Y1105_ARATH1.824e-4346.08Probable receptor-like protein kinase At1g11050 OS... [more]
FERON_ARATH1.824e-4346.35Receptor-like protein kinase FERONIA OS=Arabidopsi... [more]
CRK3_ARATH1.824e-4351.11Cysteine-rich receptor-like protein kinase 3 OS=Ar... [more]
BRL3_ARATH2.383e-4346.57Receptor-like protein kinase BRI1-like 3 OS=Arabid... [more]
ACCR4_ARATH2.383e-4345.05Serine/threonine-protein kinase-like protein CCR4 ... [more]
Y2899_ARATH3.112e-4348.44Probable leucine-rich repeat receptor-like protein... [more]
Y4245_ARATH4.064e-4347.92Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionC31701B09EF StrClemenN Citrus clementina cDNA clone C31701B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923108 ID=FC923108; Name=FC923108; organism=Citrus clementina; type=EST; length=636bp
GAATGGAACTGCTCCAGTGAAACCCGGTACTGGGCTTACTGTTGCAGTTA
AAACCTTAAATCATGGTGGACTTCAGGGACATAAAGAGTGGCTGGCGGAA
GTTAATTTCCTTGGCAACCTCCTCCATCCCAATTTGGTTAAATTGGTTGG
ATACTGCATCGAAGATGATCAAAGGCTGCTGGTATATGAGTTTATGCCTC
GAGGGAGTTTGGAAAACCACCTCTTCAGAAAAGGGTCCTTGCCACTTCCA
TGGTCTATCAGAATGAAGATTGCACTTGGTGCTGCTAAGGGTCTTGCCTT
TCTTCATGAAGAAGCTGAAAAACCTGTGATATATCGTGATTTCAAAACAT
CAAATATTTTATTAGATGCGGATTACAATGCCAAACTCTCTGATTTTGGA
CTTGCCAAAGACGCCCCAGAGGATGGTAAAACACATGTATCTACTCGAGT
AATGGGAACGTATGGATATGCTGCTCCAGAGTATGTGATGACTGGACATT
TGACATCAAAGAGTGATGTCTATAGCTTTGGAGTAGTTTTACTTGAAATG
TTGACTGGACGAAGATCCATGGATAAAAACCGACCAAATGGGGAACACAA
CCTTGTGGAATGGGCAAGACCGCATCTTGNGGACAA
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