FC923108

Overview
NameFC923108
Unique NameFC923108
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length636
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923108 vs. ExPASy Swiss-Prot
Match: WAKLO_ARATH (Wall-associated receptor kinase-like 14 OS=Arabidopsis thaliana GN=WAKL14 PE=2 SV=2)

HSP 1 Score: 174.481 bits (441), Expect = 4.064e-43
Identity = 86/192 (44.79%), Postives = 124/192 (64.58%), Query Frame = 2
Query:   41 VAVKTLNHGGLQGHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWA 616
            VA+K L H   +   + + E+  L ++ HPNLV+L+G CIE    +LVYE+MP G+L  HL R     LPW++R+ +A   AK +A+LH     P+ +RD K++NILLD D+N+K++DFGL++    +  +H+ST   GT GY  P+Y    HL+ KSDVYSFGVVL E++TG + +D  RP+ E NL   A
Sbjct:  373 VAIKRLRHRDSESLDQVMNEIKLLSSVSHPNLVRLLGCCIEQGDPVLVYEYMPNGTLSEHLQRDRGSGLPWTLRLTVATQTAKAIAYLHSSMNPPIYHRDIKSTNILLDYDFNSKVADFGLSRLGMTE-SSHISTAPQGTPGYLDPQYHQCFHLSDKSDVYSFGVVLAEIITGLKVVDFTRPHTEINLAALA 563          
BLAST of FC923108 vs. ExPASy Swiss-Prot
Match: CRK10_ARATH (Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=2)

HSP 1 Score: 174.481 bits (441), Expect = 4.064e-43
Identity = 92/210 (43.81%), Postives = 138/210 (65.71%), Query Frame = 2
Query:    5 GTAPVKPGT---GLTVAVKTLNHGGLQGHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLF---RKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWA 616
            G   V  GT   G  VAVK L+    QG  E+  EV  +  L H NLV+L+G+C++ ++R+LVYE++P  SL+  LF   +KG L   W+ R KI  G A+G+ +LH+++   +I+RD K SNILLDAD N K++DFG+A+    D     ++R++GTYGY +PEY M G  + KSDVYSFGV++LE+++G+++    + +G H+LV +A
Sbjct:  347 GFGEVYKGTLSDGTEVAVKRLSKSSGQGEVEFKNEVVLVAKLQHRNLVRLLGFCLDGEERVLVYEYVPNKSLDYFLFDPAKKGQLD--WTRRYKIIGGVARGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGLDQTEENTSRIVGTYGYMSPEYAMHGQYSMKSDVYSFGVLVLEIISGKKNSSFYQTDGAHDLVSYA 554          
BLAST of FC923108 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 5.308e-43
Identity = 96/197 (48.73%), Postives = 125/197 (63.45%), Query Frame = 2
Query:   32 GLTVAVKTLNHGGLQGHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRK--GSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAK-DAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEW 613
            G  VA+K L+    Q  +E+ AEV  L    HPNLV L+GYC   + +LL+Y +M  GSL+  L  K  G   L W  R++IA GAA+GLA+LH+  E  +++RD K+SNILL   + A L+DFGLA+   P D  THV+T ++GT GY  PEY      T K DVYSFGVVLLE+LTGRR MD  +P G  +L+ W
Sbjct:  765 GTKVAIKRLSGDTGQMDREFQAEVETLSRAQHPNLVHLLGYCNYKNDKLLIYSYMDNGSLDYWLHEKVDGPPSLDWKTRLRIARGAAEGLAYLHQSCEPHILHRDIKSSNILLSDTFVAHLADFGLARLILPYD--THVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGRRPMDVCKPRGSRDLISW 959          
BLAST of FC923108 vs. ExPASy Swiss-Prot
Match: BRL1_ARATH (Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 5.308e-43
Identity = 93/201 (46.27%), Postives = 132/201 (65.67%), Query Frame = 2
Query:   32 GLTVAVKTLNHGGLQGHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLF----RKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVM-GTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWAR 619
            G  VA+K L     QG +E++AE+  +G + H NLV L+GYC   ++RLLVYE+M  GSLE  L     +KG + L W+ R KIA+GAA+GLAFLH      +I+RD K+SN+LLD D+ A++SDFG+A+       TH+S   + GT GY  PEY  +   T+K DVYS+GV+LLE+L+G++ +D      ++NLV WA+
Sbjct:  881 GSVVAIKKLIRITGQGDREFMAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKWGSLETVLHEKSSKKGGIYLNWAARKKIAIGAARGLAFLHHSCIPHIIHRDMKSSNVLLDEDFEARVSDFGMAR-LVSALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGKKPIDPGEFGEDNNLVGWAK 1080          
BLAST of FC923108 vs. ExPASy Swiss-Prot
Match: RKF3_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RKF3 OS=Arabidopsis thaliana GN=RKF3 PE=1 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.183e-42
Identity = 93/200 (46.50%), Postives = 125/200 (62.50%), Query Frame = 2
Query:   32 GLTVAVKTLNHGGLQGHKEWLAEVNFLGNLLHPNLVKLVGYCI-----EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWA 616
            G  VA K   +    G   +  EV  + ++ H NL+ L GYC      E  QR++V + +  GSL +HLF      L W +R +IALG A+GLA+LH  A+  +I+RD K SNILLD  + AK++DFGLAK  PE G TH+STRV GT GY APEY + G LT KSDVYSFGVVLLE+L+ R+++  +      ++ +WA
Sbjct:  305 GTQVAFKRFKNCSAGGDANFAHEVEVIASIRHVNLLALRGYCTATTPYEGHQRIIVCDLVSNGSLHDHLFGDLEAQLAWPLRQRIALGMARGLAYLHYGAQPSIIHRDIKASNILLDERFEAKVADFGLAKFNPE-GMTHMSTRVAGTMGYVAPEYALYGQLTEKSDVYSFGVVLLELLSRRKAIVTDEEGQPVSVADWA 503          
BLAST of FC923108 vs. ExPASy Swiss-Prot
Match: MEE39_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MEE39 OS=Arabidopsis thaliana GN=MEE39 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.544e-42
Identity = 92/193 (47.67%), Postives = 126/193 (65.28%), Query Frame = 2
Query:   41 VAVKTLNHGGLQGHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRK-GSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDG-KTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEW 613
            VAVK L+    QG+KE+ AEV  L  + H NLV LVGYC E D   L+YE+M  G L  HL  K G   L W  R++IA+ AA GL +LH   +  +++RD K++NILLD ++ AK++DFGL++     G ++ VST V GT GY  PEY +T  L+ KSDVYSFG++LLE++T +R +D+ R N   N+ EW
Sbjct:  591 VAVKLLSQTSAQGYKEFKAEVELLLRVHHINLVNLVGYCDEQDHFALIYEYMSNGDLHQHLSGKHGGSVLNWGTRLQIAIEAALGLEYLHTGCKPAMVHRDVKSTNILLDEEFKAKIADFGLSRSFQVGGDQSQVSTVVAGTLGYLDPEYYLTSELSEKSDVYSFGILLLEIITNQRVIDQTREN--PNIAEW 781          
BLAST of FC923108 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.017e-42
Identity = 94/197 (47.72%), Postives = 123/197 (62.44%), Query Frame = 2
Query:   32 GLTVAVKTLNHGGLQGHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSL-PLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWAR 619
            G  VAVK         +++++ EV  L  + H NLV L+GYC E D+R+LVYE+M  GSL +HL       PL W  R++IA  AAKGL +LH      +I+RD K+SNILLD +  AK+SDFGL++   ED  THVS+   GT GY  PEY  +  LT KSDVYSFGVVL E+L+G++ +       E N+V WAR
Sbjct:  628 GKEVAVKITADPSSHLNRQFVTEVALLSRIHHRNLVPLIGYCEEADRRILVYEYMHNGSLGDHLHGSSDYKPLDWLTRLQIAQDAAKGLEYLHTGCNPSIIHRDVKSSNILLDINMRAKVSDFGLSRQTEED-LTHVSSVAKGTVGYLDPEYYASQQLTEKSDVYSFGVVLFELLSGKKPVSAEDFGPELNIVHWAR 823          
BLAST of FC923108 vs. ExPASy Swiss-Prot
Match: CRK25_ARATH (Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.017e-42
Identity = 87/196 (44.39%), Postives = 130/196 (66.33%), Query Frame = 2
Query:   29 TGLTVAVKTLNHGGLQGHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLF-RKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEW 613
            TG TVA+K L+ G  QG +E+  EV+ +  L H NL KL+GYC++ ++++LVYEF+P  SL+  LF  +    L W  R KI  G A+G+ +LH ++   +I+RD K SNILLDAD + K+SDFG+A+    D     + R++GTYGY +PEY + G  + KSDVYSFGV++LE++TG+++      +G  +LV +
Sbjct:  368 TGETVAIKRLSQGSTQGAEEFKNEVDVVAKLQHRNLAKLLGYCLDGEEKILVYEFVPNKSLDYFLFDNEKRRVLDWQRRYKIIEGIARGILYLHRDSRLTIIHRDLKASNILLDADMHPKISDFGMARIFGVDQTQANTKRIVGTYGYMSPEYAIHGKYSVKSDVYSFGVLVLELITGKKNSSFYEEDGLGDLVTY 563          
BLAST of FC923108 vs. ExPASy Swiss-Prot
Match: ANX1_ARATH (Receptor-like protein kinase ANXUR1 OS=Arabidopsis thaliana GN=ANX1 PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.017e-42
Identity = 88/192 (45.83%), Postives = 122/192 (63.54%), Query Frame = 2
Query:   41 VAVKTLNHGGLQGHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWA 616
            VAVK  N    QG  E+  E+  L  L H +LV L+GYC E  +  LVY++M  G+L  HL+      L W  R++IA+GAA+GL +LH  A+  +I+RD KT+NIL+D ++ AK+SDFGL+K  P     HV+T V G++GY  PEY     LT KSDVYSFGVVL E+L  R +++ + P  + +L +WA
Sbjct:  542 VAVKKSNPNSEQGLNEFETEIELLSRLRHKHLVSLIGYCDEGGEMCLVYDYMAFGTLREHLYNTKKPQLTWKRRLEIAIGAARGLHYLHTGAKYTIIHRDVKTTNILVDENWVAKVSDFGLSKTGPNMNGGHVTTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEILCARPALNPSLPKEQVSLGDWA 733          
BLAST of FC923108 vs. ExPASy Swiss-Prot
Match: CRK40_ARATH (Cysteine-rich receptor-like protein kinase 40 OS=Arabidopsis thaliana GN=CRK40 PE=1 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 2.634e-42
Identity = 93/190 (48.95%), Postives = 126/190 (66.32%), Query Frame = 2
Query:    5 GTAPVKPGTGLTVAVKTLNHGGLQGHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFR--KGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRS 568
            GT P     G  VAVK L  G  QG  E+  EV+ L  L H NLVKL+G+C E D+ +LVYEF+P  SL++ +F   K SL L W +R +I  G A+GL +LHE+++  +I+RD K SNILLDA+ N K++DFG A+    D     + R+ GT GY APEY+  G +++KSDVYSFGV+LLEM++G R+
Sbjct:  365 GTFP----NGQEVAVKRLTKGSGQGDMEFKNEVSLLTRLQHKNLVKLLGFCNEGDEEILVYEFVPNSSLDHFIFDEDKRSL-LTWEVRFRIIEGIARGLLYLHEDSQLKIIHRDLKASNILLDAEMNPKVADFGTARLFDSDETRAETKRIAGTRGYMAPEYLNHGQISAKSDVYSFGVMLLEMISGERN 549          
The following BLAST results are available for this feature:
BLAST of FC923108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
WAKLO_ARATH4.064e-4344.79Wall-associated receptor kinase-like 14 OS=Arabido... [more]
CRK10_ARATH4.064e-4343.81Cysteine-rich receptor-like protein kinase 10 OS=A... [more]
PSKR1_DAUCA5.308e-4348.73Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]
BRL1_ARATH5.308e-4346.27Serine/threonine-protein kinase BRI1-like 1 OS=Ara... [more]
RKF3_ARATH1.183e-4246.50Probable LRR receptor-like serine/threonine-protei... [more]
MEE39_ARATH1.544e-4247.67Probable LRR receptor-like serine/threonine-protei... [more]
Y1677_ARATH2.017e-4247.72Probable LRR receptor-like serine/threonine-protei... [more]
CRK25_ARATH2.017e-4244.39Cysteine-rich receptor-like protein kinase 25 OS=A... [more]
ANX1_ARATH2.017e-4245.83Receptor-like protein kinase ANXUR1 OS=Arabidopsis... [more]
CRK40_ARATH2.634e-4248.95Cysteine-rich receptor-like protein kinase 40 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionC31701B09EF StrClemenN Citrus clementina cDNA clone C31701B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923108 ID=FC923108; Name=FC923108; organism=Citrus clementina; type=EST; length=636bp
GAATGGAACTGCTCCAGTGAAACCCGGTACTGGGCTTACTGTTGCAGTTA
AAACCTTAAATCATGGTGGACTTCAGGGACATAAAGAGTGGCTGGCGGAA
GTTAATTTCCTTGGCAACCTCCTCCATCCCAATTTGGTTAAATTGGTTGG
ATACTGCATCGAAGATGATCAAAGGCTGCTGGTATATGAGTTTATGCCTC
GAGGGAGTTTGGAAAACCACCTCTTCAGAAAAGGGTCCTTGCCACTTCCA
TGGTCTATCAGAATGAAGATTGCACTTGGTGCTGCTAAGGGTCTTGCCTT
TCTTCATGAAGAAGCTGAAAAACCTGTGATATATCGTGATTTCAAAACAT
CAAATATTTTATTAGATGCGGATTACAATGCCAAACTCTCTGATTTTGGA
CTTGCCAAAGACGCCCCAGAGGATGGTAAAACACATGTATCTACTCGAGT
AATGGGAACGTATGGATATGCTGCTCCAGAGTATGTGATGACTGGACATT
TGACATCAAAGAGTGATGTCTATAGCTTTGGAGTAGTTTTACTTGAAATG
TTGACTGGACGAAGATCCATGGATAAAAACCGACCAAATGGGGAACACAA
CCTTGTGGAATGGGCAAGACCGCATCTTGNGGACAA
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