FC923109
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923109 vs. ExPASy Swiss-Prot
Match: PSMA_METS5 (Proteasome subunit alpha OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=psmA PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 4.792e-32 Identity = 76/199 (38.19%), Postives = 122/199 (61.31%), Query Frame = 1 Query: 82 GYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPTFSYEETVQTAVSALQSVL 678 GYDR ITIFSP+G L+QV+YAF+AVK T++GV+ K++V ++ +KK +LLD + +F + ++G G +D R L+ ARN + ++R + + +D L++ I+D Q+YTQH +RP GV +V G+D +L+ +P+G F ++A + G A ++LEK K D S EET+ A++AL+ L Sbjct: 9 GYDRAITIFSPDGSLYQVDYAFEAVKK-GWTTLGVKTKNAVVILGEKKKASQLLDVDSIEKVFLLDDHVGCSFAGLASDGRILIDYARNSSLQHRLVYDEPISIDYLTKLISDVKQMYTQHGGVRPFGVALIVGGVDRGV-TKLFMTEPSGQFMPYQAVAIGQGGYNATDYLEKNYKED--LSVEETILLALNALKVTL 203
BLAST of FC923109 vs. ExPASy Swiss-Prot
Match: PSMA_METAC (Proteasome subunit alpha OS=Methanosarcina acetivorans GN=psmA PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.258e-32 Identity = 69/179 (38.55%), Postives = 109/179 (60.89%), Query Frame = 1 Query: 82 GYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 618 GYDR IT+FSP+GRLFQVEYA +AVK T++G++ D V ++ K++ +L++ + +F I +++G +G ADARSLV +AR EA R + + V+V+S+ I D Q YTQ+ +RP G ++ G+D+ K P+L++ DP+G +KAT+ G + E + D Sbjct: 6 GYDRAITVFSPDGRLFQVEYAREAVKR-GTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQIDEHIGAATSGLVADARSLVDRARVEAQVNRVSYDEPIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVDDNK-PRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYRED 182
BLAST of FC923109 vs. ExPASy Swiss-Prot
Match: PSMA_METTH (Proteasome subunit alpha OS=Methanobacterium thermoautotrophicum GN=psmA PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 8.174e-32 Identity = 74/196 (37.76%), Postives = 120/196 (61.22%), Query Frame = 1 Query: 79 AGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPTFSYEETVQTAVSAL 666 AGYDR IT+FSP+GRLFQVEYA +AVK TS+GV+ K+ + +V K+ KL++ + +F I +++G +G ADAR+++ +AR EA R + + V+ L++ I D Q+YTQH +RP G A+++G +G +L++ DP+G +KAT+ G A+ EKK +D + + ++ A+ A+ Sbjct: 7 AGYDRAITVFSPDGRLFQVEYAREAVKR-GTTSLGVKSKEGIVLVVDKRPTSKLVEPKSIEKIFQIDEHIGAATSGLVADARAIIEKARLEAQINRITYNEPIRVESLAKKICDMKQMYTQHGGVRPFG-TALIIGGVNGRGCRLFETDPSGALIEYKATAIGAGRPAAMEEFEKKYSDD--MNLNQAIELALDAV 198
BLAST of FC923109 vs. ExPASy Swiss-Prot
Match: PSMA_ARCFU (Proteasome subunit alpha OS=Archaeoglobus fulgidus GN=psmA PE=1 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 8.174e-32 Identity = 74/182 (40.66%), Postives = 113/182 (62.09%), Query Frame = 1 Query: 82 GYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPTF 627 GYDR IT+FSP+GRLFQVEYA +AVK A T+IG++ K+ V ++ K+V KLL+ + ++ I +++ +G ADAR L+ +AR EA R + + V L++ I D Q YTQ+ +RP GV ++ G+DE P+LY+ DP+G +KAT+ G+ F EK+ ++D +F Sbjct: 7 GYDRAITVFSPDGRLFQVEYAREAVKRGA-TAIGIKCKEGVILIADKRVGSKLLEADTIEKIYKIDEHICAATSGLVADARVLIDRARIEAQINRLTYDEPITVKELAKKICDFKQQYTQYGGVRPFGVSLLIAGVDEV--PKLYETDPSGALLEYKATAIGMGRNAVTEFFEKEYRDDLSF 185
BLAST of FC923109 vs. ExPASy Swiss-Prot
Match: PSMA_THEGJ (Proteasome subunit alpha OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=psmA PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.068e-31 Identity = 76/200 (38.00%), Postives = 118/200 (59.00%), Query Frame = 1 Query: 79 AGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPTFSYEETVQTAVSALQSVL 678 AGYDR IT+FSP+GRLFQV YA +AVK A T++GV+ K V + +K++ +L++ + +F I ++ +G ADAR LV +AR EA YR +G +P+ VL + I D Q +TQ+ +RP G ++ G++E+ P+LY+ DP+G +F KA + G A+ E+ +D E ++ A+ AL L Sbjct: 8 AGYDRAITVFSPDGRLFQVNYAREAVKRGA-TAVGVKWKGGVVLAVEKRITSRLIEPSSYEKIFQIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAGVNEK--PELYETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYSDD--IDMEGAIKLAILALAKTL 202
BLAST of FC923109 vs. ExPASy Swiss-Prot
Match: PSMA_THEVO (Proteasome subunit alpha OS=Thermoplasma volcanium GN=psmA PE=3 SV=2) HSP 1 Score: 136.346 bits (342), Expect = 1.394e-31 Identity = 80/206 (38.83%), Postives = 127/206 (61.65%), Query Frame = 1 Query: 61 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPTFSYEETVQTAVSALQSVL 678 M +G A YDR IT+FSP+GRLFQVEYA +AVK + T++G++ + V +++ KK+ KL++Q + + I Y+ + +G ADAR L+ AR A + + +G + ++ L + +AD+ Q YTQ+ +RP GV + GID + GP+L+ CDPAG +KAT+ G + ++FLEK+ K S +E V + AL++ L Sbjct: 1 MQQGQMA-YDRAITVFSPDGRLFQVEYAREAVKKGS-TALGLKFSNGVLLISDKKIRSKLIEQNSLEKIQLIDDYVAAVTSGLVADARVLIDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGID-QIGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEKEYKEG--LSEKEAVTLGIKALKASL 201
BLAST of FC923109 vs. ExPASy Swiss-Prot
Match: PSMA_THEON (Proteasome subunit alpha OS=Thermococcus onnurineus (strain NA1) GN=psmA PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.394e-31 Identity = 75/200 (37.50%), Postives = 118/200 (59.00%), Query Frame = 1 Query: 79 AGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPTFSYEETVQTAVSALQSVL 678 AGYDR IT+FSP+GRLFQV YA +AVK A T++GV+ K+ V + +K++ KL++ + +F I ++ +G ADAR LV +AR EA YR +G +P+ VL + I D Q +TQ+ +RP G ++ G++++ P+LY+ DP+G +F +A + G A+ E +D E ++ A+ AL L Sbjct: 8 AGYDRAITVFSPDGRLFQVNYAREAVKRGA-TAVGVKWKEGVVLAVEKRITSKLIEPSSYEKIFQIDDHIAAAPSGIIADARVLVDRARLEAQVYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAGVNDK--PELYETDPSGAYFEWRAVAIGSGRNTAMAIFEDHYSDD--LDMEGAIKLAILALAKTL 202
BLAST of FC923109 vs. ExPASy Swiss-Prot
Match: PSMA_METM5 (Proteasome subunit alpha OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=psmA PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.394e-31 Identity = 76/196 (38.78%), Postives = 116/196 (59.18%), Query Frame = 1 Query: 79 AGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPTFSYEETVQTAVSAL 666 +GYDR ITIFSPEGRL+QVEYA +AV+ T++G++ KD V + +++ KL+D + + +F I ++ +G ADAR L+ +AR EA R +G + V+ L++ I D Q YTQH RP G+ ++ GID +L++ DP+G +KAT+ G A+ LE K D T + E ++ A+ AL Sbjct: 8 SGYDRAITIFSPEGRLYQVEYAREAVRR-GTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDRHSA-RLFETDPSGALIEYKATAIGSGRPIAMEVLESKYSEDMTVN--EGMELALYAL 199
BLAST of FC923109 vs. ExPASy Swiss-Prot
Match: PSMA_SULAC (Proteasome subunit alpha OS=Sulfolobus acidocaldarius GN=psmA PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.821e-31 Identity = 77/207 (37.20%), Postives = 121/207 (58.45%), Query Frame = 1 Query: 61 MSRGSGA-GYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPTFSYEETVQTAVSALQSVL 678 M+ G A GYDR ITIFSP+G L+QV+YAF+AVK T++GV+ K V ++ +K+ +LLD + +F + ++G G +D R L+ AR++A ++R + + ++ L++ I+D Q YTQH +RP GV +V GID+ K P+L +P+G F + A + G A +LEK K D + T+ A+ AL + L Sbjct: 1 MALGPAAMGYDRAITIFSPDGSLYQVDYAFEAVKR-GWTTLGVKTKSGVVLLAEKRKATQLLDVDGIEKIFMLDDHVGCTFAGLASDGRILIDYARSQALQHRLIYDEPISIEYLTKVISDVKQAYTQHGGVRPFGVALIVGGIDKGKQPKLLMTEPSGQFMPYYAVAIGQGGYTATEYLEKNYKED--LDIQSTILLALRALMATL 204
BLAST of FC923109 vs. ExPASy Swiss-Prot
Match: PSMA_METVS (Proteasome subunit alpha OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=psmA PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.821e-31 Identity = 75/196 (38.27%), Postives = 115/196 (58.67%), Query Frame = 1 Query: 79 AGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPTFSYEETVQTAVSAL 666 +GYDR ITIFSPEGRL+QVEYA +AV+ T++G++ KD V + +++ KL+D + + +F I ++ +G ADAR L+ +AR EA R +G + V+ L++ I D Q YT H RP G+ ++ GID +L++ DP+G +KAT+ G A+ LE+K D S E ++ A+ AL Sbjct: 8 SGYDRAITIFSPEGRLYQVEYAREAVRR-GTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARVEAQVNRISYGEAITVEALAKKICDIKQAYTHHGGARPFGLALLITGIDRHSA-RLFETDPSGALIEYKATAIGSGRPVAMEILEEKY--DENMSVSEGMELAIYAL 199 The following BLAST results are available for this feature:
BLAST of FC923109 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 174
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923109 ID=FC923109; Name=FC923109; organism=Citrus clementina; type=EST; length=678bpback to top |