FC923109
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923109 vs. ExPASy Swiss-Prot
Match: PSMA_METMJ (Proteasome subunit alpha OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=psmA PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.884e-28 Identity = 65/183 (35.52%), Postives = 107/183 (58.47%), Query Frame = 1 Query: 82 GYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPTFS 630 GYDR IT+FSP+GRL+QVEYA +AVK T++G++ + V ++ K+V +LL+ + +F I ++G+ ++G DARSLV +AR E+ R + + V++L++ + D Q YTQ RP G ++ G+ + + +L++ DP+G +KAT G I E + + D FS Sbjct: 8 GYDRAITVFSPDGRLYQVEYAREAVKR-GTTAVGIKCSEGVVLIVDKRVTSRLLEPVSIEKIFKIDAHIGVASSGLVGDARSLVDRARVESQINRVSYNEPINVEILAKKLCDHMQTYTQFGGARPYGTALLIAGVSDGEA-RLFETDPSGTLLEYKATGIGTGRPAVIKTFEDEYQEDADFS 188
BLAST of FC923109 vs. ExPASy Swiss-Prot
Match: PSA7_CHICK (Proteasome subunit alpha type-7 OS=Gallus gallus GN=PSMA7 PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.884e-28 Identity = 72/198 (36.36%), Postives = 114/198 (57.58%), Query Frame = 1 Query: 85 YDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPTFSYEETVQTAVSALQSVL 678 YDR IT+FSP+G LFQVEYA +AVK + T++GVRGKD V + +KK KL D+ V + + + + G TADAR ++++AR E +R + V+ ++R+IA Q YTQ RP G+ A+++G D + P+LY+ DP+G + KA + G + EK ++ + + T++ + AL V+ Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGS-TAVGVRGKDIVVLGVEKKSVAKLQDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSKRRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVRVEFEKNYTDEAIETDDLTIKLVIKALLEVV 199
BLAST of FC923109 vs. ExPASy Swiss-Prot
Match: PSA3_DROME (Proteasome subunit alpha type-3 OS=Drosophila melanogaster GN=Prosalpha7 PE=1 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.884e-28 Identity = 74/200 (37.00%), Postives = 114/200 (57.00%), Query Frame = 1 Query: 76 GAGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPTFSYEETVQTAVSALQSV 675 G GYD + FSP+GR+FQ++YA KAV+ + T IG+RGKD+V + +K + KL + +F I K +G+ G AD + AR EAA YR +F +P+ L +A YT ++ +RP G+ ++ DE +GPQLYK +P+G FG+ A ++G +Q A +E K+K D +E V++A + V Sbjct: 5 GTGYDLSASQFSPDGRVFQIDYASKAVEKSG-TVIGIRGKDAVVLAVEKIITSKLYEPDAGGRIFTIEKNIGMAVAGLVADGNFVADIARQEAANYRQQFEQAIPLKHLCHRVAGYVHAYTLYSAVRPFGLSIILASWDEVEGPQLYKIEPSGSSFGYFACASGKAKQLAKTEME-KLKMD--MRTDELVESAGEIIYKV 200
BLAST of FC923109 vs. ExPASy Swiss-Prot
Match: PSA2_DICDI (Proteasome subunit alpha type-2 OS=Dictyostelium discoideum GN=psmA2 PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.461e-28 Identity = 73/195 (37.44%), Postives = 118/195 (60.51%), Query Frame = 1 Query: 85 YDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPTFSYEETVQTAVSALQ 669 Y +T FSP G+L Q+E+A +A A+ ++IG++ K+ V ++T+KK+ L+D T V + IT+ +GL+ G D+R L+ +AR E+ +Y ++ ++PV L R +A Q +TQ +RP GV +V G D EKGP LY+ DP+G +F KAT+ G + FLEK+ +D E+ +QTA+ ++ Sbjct: 5 YSFSLTTFSPSGKLVQIEHALQAA-ASGGSAIGIKAKNGVVLITEKKL-HSLVDVTSVQKISMITENIGLVYAGMGPDSRVLIKKARKESEKYYKQYKEKIPVLQLVRELASIMQEFTQSGGVRPFGVSLLVAGFD-EKGPHLYQVDPSGSYFAWKATAIGKNMVSSKTFLEKRYSDD--LEIEDAIQTALITIK 194
BLAST of FC923109 vs. ExPASy Swiss-Prot
Match: PSA4_DICDI (Proteasome subunit alpha type-4 OS=Dictyostelium discoideum GN=psmA4 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.214e-28 Identity = 76/201 (37.81%), Postives = 112/201 (55.72%), Query Frame = 1 Query: 85 YDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQ-TCVTH-LFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATS-AGLKEQEAINFLEKKMKNDPTFSYEETVQTAVSALQSVL 678 YD+ TIFSPEGR++QVEYA A++ T +G+ KD + + +KK KLLD T ++ +F I +++ G T+DA L++ AR + + +++ MPV+ L I D Q YTQ+ +RP GV + G D G QLY+ DP+G+F G KATS G Q A + L K P S +E +Q A+ L + Sbjct: 5 YDQRTTIFSPEGRVYQVEYAMTAIRHAGAT-VGILAKDGIVLAAEKKTTAKLLDSSTSISEKMFKIDEHVVCAVAGITSDANILINYARLSSQRFFYQYQEPMPVEQLVSQICDTKQGYTQYGGLRPFGVSFLYAGWDRHYGFQLYQSDPSGNFAGWKATSIGGENSQVAQSVLRSNYK--PDISLKEALQLALKVLTKTM 202
BLAST of FC923109 vs. ExPASy Swiss-Prot
Match: PSA2_CARAU (Proteasome subunit alpha type-2 OS=Carassius auratus GN=psma2 PE=2 SV=3) HSP 1 Score: 124.79 bits (312), Expect = 4.198e-28 Identity = 72/196 (36.73%), Postives = 109/196 (55.61%), Query Frame = 1 Query: 82 GYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPTFSYEETVQTAVSALQ 669 GY +T FSP G+L Q+EYA AV A A S+G++ + V + T+KK L D+ V + PITK++G++ +G D R LV +AR A +Y + +P L + +A Q YTQ +RP GV ++ G DE++ P L++ DP+G +F KAT+ G FLEK+ D E+ + TA+ L+ Sbjct: 5 GYSFSLTTFSPSGKLVQIEYALAAVAAGA-PSVGIKASNGVVLATEKKQKSILYDEQSVHKIEPITKHIGMVYSGMGPDYRVLVRRARKLAQQYFLVYQEPIPTGQLVQRVASVMQEYTQSGGVRPFGVSLLIAGWDEDR-PYLFQSDPSGAYFAWKATAMGKSYVNGKTFLEKRYNED--LELEDAIHTAILTLK 196
BLAST of FC923109 vs. ExPASy Swiss-Prot
Match: PSA7L_HUMAN (Proteasome subunit alpha type-7-like OS=Homo sapiens GN=PSMA8 PE=1 SV=3) HSP 1 Score: 124.02 bits (310), Expect = 7.161e-28 Identity = 72/204 (35.29%), Postives = 116/204 (56.86%), Query Frame = 1 Query: 85 YDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCVTHLFPITKYLGL------LATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPTFSYEETVQTAVSALQSVL 678 YDR IT+FSP+G LFQVEYA +AVK + T++G+RG + V + +KK KL D+ V + + ++ + + G TADAR ++++AR E ++ + V+ ++R+IA Q YTQ RP G+ A+++G D++ +LY+ DP+G + KA + G + FLEK D S E ++ A+ AL V+ Sbjct: 5 YDRAITVFSPDGHLFQVEYAQEAVKKGS-TAVGIRGTNIVVLGVEKKSVAKLQDERTVRKICALDDHVCMAFAVLTIFIGLTADARVVINRARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDGISRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAIASDSEAIKLAIKALLEVV 207
BLAST of FC923109 vs. ExPASy Swiss-Prot
Match: PSA5B_ARATH (Proteasome subunit alpha type-5-B OS=Arabidopsis thaliana GN=PAE2 PE=1 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 7.161e-28 Identity = 74/201 (36.82%), Postives = 115/201 (57.21%), Query Frame = 1 Query: 85 YDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVY---TQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPTFSYEETVQTAVSALQSVL 678 YDR + FSPEGRLFQVEYA +A+K + T+IGV+ K+ V + +K++ LL+ + V + I ++G +G ADAR+LV AR E +RF +G M V+ ++ + D + + + + RP GV ++ G D E GP LY DP+G F+ A + G + A + L+++ D T ET+ AVS L+ V+ Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGS-TAIGVKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGEEESMSRPFGVSLLIAGHD-ENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFNKDITLQEAETI--AVSILKQVM 204
BLAST of FC923109 vs. ExPASy Swiss-Prot
Match: PSA7_TRYBB (Proteasome subunit alpha type-7 OS=Trypanosoma brucei brucei GN=PSA4 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 9.352e-28 Identity = 69/194 (35.57%), Postives = 112/194 (57.73%), Query Frame = 1 Query: 85 YDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPTFSYEETVQTAVSAL 666 YDR IT+FSP+G LFQVEYA +AV+ + ++GV+GKDS+ +KK KL D ++ + +++ L + G +ADAR +V+ A+ E +R + + VD+L R++A Q TQ + RP GV ++ G +E PQL+K +P+G A + G ++ + F+EK ++ T + V A+ AL Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVRK-GLCAVGVKGKDSIIFAVEKKSVQKLQDSRTTRKIYKLDEHIYLASAGLSADARVVVNHAQLECQRFRLSYEDAIDVDLLVRYVARVQQRSTQSSGSRPYGVSTIIGGFNENGQPQLWKTEPSGTSSAWNAAAIGRNDKVVLEFMEKNYQDGMT--RDRCVHFAIKAL 193
BLAST of FC923109 vs. ExPASy Swiss-Prot
Match: PSA3_DICDI (Proteasome subunit alpha type-3 OS=Dictyostelium discoideum GN=psmA3 PE=2 SV=2) HSP 1 Score: 123.635 bits (309), Expect = 9.352e-28 Identity = 67/176 (38.07%), Postives = 107/176 (60.80%), Query Frame = 1 Query: 76 GAGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEK 603 G+GYD +++ +SP+G+LFQV+YA KAV+ + T + ++ KD V + +K VP K+L + I ++G+ G ADAR L+ +AR+EA Y+ +G +P+ VLS+ IA + ++T + +RP G + GID + GPQL+ +P+G G+ S G +Q A N LEK Sbjct: 5 GSGYDLYVSTYSPDGKLFQVDYANKAVENSG-TLVAIKAKDGVVLGVEKLVPSKMLCSGSNRRVHHIDTHVGVAIAGFLADARQLITRARSEAKNYKSTYGQPIPIKVLSQRIASYNHMHTLYGSVRPFGCSIAITGID-QYGPQLFLVEPSGSCVGYFGASLGKGKQAAKNELEK 178 The following BLAST results are available for this feature:
BLAST of FC923109 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 174
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923109 ID=FC923109; Name=FC923109; organism=Citrus clementina; type=EST; length=678bpback to top |