FC923112
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA7A_ORYSI (Proteasome subunit alpha type-7-A OS=Oryza sativa subsp. indica GN=OsI_029135 PE=2 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 3.308e-35 Identity = 80/179 (44.69%), Postives = 109/179 (60.89%), Query Frame = 3 Query: 87 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSD--ENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYK 617 YDR + FSP+G LFQVEYA+EA++ G+ A+G++ + VVL VEK+ T L + S+ KI +D HI A +GL ADAR L+ ARVE Q+HR + +P+TVE T+ + L ++ + RPFG+S LI G D P+LY TDPSGTF A A G S L++ YK Sbjct: 4 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLGVEKKSTPKLQDSRSMRKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQKY---TQSGGVRPFGLSTLIVGFDPYTEKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYK 179
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA7B_ORYSJ (Proteasome subunit alpha type-7-B OS=Oryza sativa subsp. japonica GN=PAD1 PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 4.321e-35 Identity = 80/180 (44.44%), Postives = 110/180 (61.11%), Query Frame = 3 Query: 87 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSD--ENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQ 620 YDR + FSP+G LFQVEYA+EA++ G+ A+G++ + VVL VEK+ T L + SV KI +D HI A +GL ADAR L+ ARVE Q+HR + + +TVE T+ + L ++ + RPFG+S LI G D + P+LY TDPSGTF A A G S L++ YK+ Sbjct: 4 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGSDTVVLGVEKKSTPKLQDSRSVRKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDAVTVEYITRYIAGLQQKY---TQSGGVRPFGLSTLIVGFDPYTDKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE 180
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA7B_ORYSI (Proteasome subunit alpha type-7-B OS=Oryza sativa subsp. indica GN=PAD1 PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 4.321e-35 Identity = 80/180 (44.44%), Postives = 110/180 (61.11%), Query Frame = 3 Query: 87 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSD--ENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQ 620 YDR + FSP+G LFQVEYA+EA++ G+ A+G++ + VVL VEK+ T L + SV KI +D HI A +GL ADAR L+ ARVE Q+HR + + +TVE T+ + L ++ + RPFG+S LI G D + P+LY TDPSGTF A A G S L++ YK+ Sbjct: 4 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGSDTVVLGVEKKSTPKLQDSRSVRKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDAVTVEYITRYIAGLQQKY---TQSGGVRPFGLSTLIVGFDPYTDKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE 180
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA4_DICDI (Proteasome subunit alpha type-4 OS=Dictyostelium discoideum GN=psmA4 PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 9.626e-35 Identity = 82/193 (42.49%), Postives = 119/193 (61.66%), Query Frame = 3 Query: 87 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSS--VEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDEN-GPSLYYTDPSGTFWQCNAKAI-GSGSEGADSSLQEQYKQDLTLQEAETIA 653 YD+ FSPEGR++QVEYA+ AI+ +G+ K+G+VLA EK+ T+ LL+ S+ EK+ +IDEH+ CA++G+ +DA L+ +AR+ +Q + Y EPM VE +CD + + RPFGVS L AG D + G LY +DPSG F A +I G S+ A S L+ YK D++L+EA +A Sbjct: 5 YDQRTTIFSPEGRVYQVEYAMTAIRHAGATVGILAKDGIVLAAEKKTTAKLLDSSTSISEKMFKIDEHVVCAVAGITSDANILINYARLSSQRFFYQYQEPMPVEQLVSQICDTKQGY---TQYGGLRPFGVSFLYAGWDRHYGFQLYQSDPSGNFAGWKATSIGGENSQVAQSVLRSNYKPDISLKEALQLA 194
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA1B_ARATH (Proteasome subunit alpha type-1-B OS=Arabidopsis thaliana GN=PAF2 PE=1 SV=2) HSP 1 Score: 146.747 bits (369), Expect = 9.626e-35 Identity = 86/190 (45.26%), Postives = 113/190 (59.47%), Query Frame = 3 Query: 78 RTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADS-------SLQEQYKQDL 626 R +YD V T+SP GRLFQVEYA+EA+K GS AIGL+++ VVLA + S L S KI ++D+HIG A++GL AD R L + R E+ NH F+Y P+ V L D A + S RP+GV LL+ G DE+G LYY PSG +++ A AIGS S+ A + S QE K+DL Sbjct: 3 RNQYDTDVTTWSPTGRLFQVEYAMEAVKQGSAAIGLRSRSHVVLACVNKAQSEL--SSHQRKIFKVDDHIGVAIAGLTADGRVLSRYMRSESINHSFTYESPLPVGRLVVHLADKA---QVCTQRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERKFESFQESSKEDL 187
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA73_DROME (Proteasome subunit alpha type-7-1B OS=Drosophila melanogaster GN=Pros28.1B PE=2 SV=2) HSP 1 Score: 145.976 bits (367), Expect = 1.642e-34 Identity = 76/185 (41.08%), Postives = 111/185 (60.00%), Query Frame = 3 Query: 87 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENG-PSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQE 638 YDR V +SP+G L QVEYA EA++ GST +GL+T +V+ VEKR L E V KI +D+H+ SGL ADAR LV A++E Q+HR ++ +P TVE T+ + L + + + RPFG+S L+ G DE+G P L+ TDPSG F++ A G S+ +++ + LT+ + Sbjct: 5 YDRAVTIYSPDGHLLQVEYAQEAVRRGSTVMGLRTNNAIVIGVEKRSVGDLQEERMVRKICMLDDHVVMTFSGLTADARILVSRAQMEAQSHRLNFEKPTTVEYITRYIAQLKQNYTQSNGR---RPFGLSCLVGGFDEDGTPHLFQTDPSGIFYEWRANTTGRSSQPVRDYMEKHADEILTIAD 186
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA1A_ARATH (Proteasome subunit alpha type-1-A OS=Arabidopsis thaliana GN=PAF1 PE=1 SV=3) HSP 1 Score: 145.976 bits (367), Expect = 1.642e-34 Identity = 81/180 (45.00%), Postives = 111/180 (61.67%), Query Frame = 3 Query: 78 RTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYK 617 R +YD V T+SP GRLFQVEYA+EA+K GS AIGL+++ VVLA + S L S KI ++D+HIG A++GL AD R L + R E+ NH F+Y P+ V L D A + S RP+GV LL+ G DE+G LYY PSG +++ A AIGS S+ A + L+ +++ Sbjct: 3 RNQYDTDVTTWSPTGRLFQVEYAMEAVKQGSAAIGLRSRSHVVLACVNKAQSEL--SSHQRKIFKVDDHIGVAIAGLTADGRVLSRYMRSESINHSFTYESPLPVGRLVVHLADKA---QVCTQRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFE 177
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA4_SCHPO (Probable proteasome subunit alpha type-4 OS=Schizosaccharomyces pombe GN=SPAC13C5.01c PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.815e-33 Identity = 79/191 (41.36%), Postives = 113/191 (59.16%), Query Frame = 3 Query: 87 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLE-PSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDE-NGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEAETIA 653 YD FSPEGRL+QVEYA+EAI A+G+ K+G+VLA EK++TS LLE S EK+ I +++ CA++GL ADA L+ +AR Q + ++ E M E + +CDL + + RPFGVS L AG D G L+ ++PSG + A +IG S S ++++YK D+ L EA +A Sbjct: 5 YDSRTTIFSPEGRLYQVEYALEAINHAGVALGIVAKDGIVLAAEKKVTSKLLEQEESAEKLYHIGDNMLCAVAGLTADANILINYARRVGQQYLQTFNEEMPCEQLVRRVCDLKQGY---TQYGGLRPFGVSFLYAGWDHIRGYQLFQSNPSGNYGSWQANSIGGNSTSVQSLMRQEYKDDINLDEASAMA 192
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA3_ACACA (Proteasome subunit alpha type-3 (Fragment) OS=Acanthamoeba castellanii PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.815e-33 Identity = 75/187 (40.11%), Postives = 110/187 (58.82%), Query Frame = 3 Query: 81 TEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEA 641 T YD TFSP+GR+FQVEYA +A+ TA+GL+ K+GVVLAVEK + S +L P++ +I +D H G AMSGL+AD R LV R E ++R YG ++ + + L + + RPFG S+++ D+NGP LY +PSG W AIG G+ A + +++ ++T +EA Sbjct: 4 TGYDLSSTTFSPDGRVFQVEYAAKAVDNSGTALGLRVKDGVVLAVEKLLVSKMLVPNTNRRIHTVDRHCGLAMSGLVADGRQLVSRGRAEATSYREFYGTDISGKVLNERLSNFVQLY---SLYGSVRPFGTSVILGCVDKNGPQLYMIEPSGISWGYFGVAIGKGARAAKTEIEKLKLSEMTAREA 187
BLAST of FC923112 vs. ExPASy Swiss-Prot
Match: PSA7_SCHPO (Probable proteasome subunit alpha type-7 OS=Schizosaccharomyces pombe GN=SPBC106.16 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.371e-33 Identity = 76/191 (39.79%), Postives = 118/191 (61.78%), Query Frame = 3 Query: 87 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSD--ENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYKQDLTLQEAETIA 653 YDR ++ FSP+GRL QVEY EA++ G+TAI L+ E +V+ VE++ L S+ +KI +D H+ A +GL ADAR L++ ARVE QNH+ + +P+++E T+ + + ++ + RPFGVS LIAG D +N P +Y T+P+G + A AIG S+ A L++ +K+ L+ E +A Sbjct: 4 YDRALSVFSPDGRLLQVEYGQEAVRRGTTAIALRGNECIVIGVERKNVPKLQNVSNFQKIAMVDNHVCLAFAGLNADARILIDKARVEAQNHKLNLADPVSIEYLTRYVAGVQQKY---TQSGGVRPFGVSTLIAGFDVGDNTPRVYQTEPAGIYNAWKATAIGRASKAAREYLEKNWKEGLSRDETIHLA 191 The following BLAST results are available for this feature:
BLAST of FC923112 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 197
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923112 ID=FC923112; Name=FC923112; organism=Citrus clementina; type=EST; length=654bpback to top |