FC923115

Overview
NameFC923115
Unique NameFC923115
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length662
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923115 vs. ExPASy Swiss-Prot
Match: EIF3I_NEMVE (Eukaryotic translation initiation factor 3 subunit I OS=Nematostella vectensis GN=v1g239264 PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.411e-33
Identity = 70/181 (38.67%), Postives = 104/181 (57.46%), Query Frame = 2
Query:  113 MRPILMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIARDPADQGGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLL 655
            M+P+ + GHER +T +KYN+ GDLLFS AKD  PTVW++ NGERLGTY GH GAVWC DV+ D+   I+G AD   +LW+ E G  L      S  R+  F+ G    +++TD  M  +  I    +  D  D     +L +     ++   +WGPL++ +++  E+  +  WD ++G  L
Sbjct:    1 MKPLALHGHERNITQIKYNRMGDLLFSAAKDTRPTVWYSLNGERLGTYNGHGGAVWCIDVNYDTTQFISGGADNCLRLWDCEKGVTLSKIETKSAVRTCGFSYGGNEIMLSTDRQMGQSCRI----LIFDVRDNMESPILTIPVDNSKVTAGLWGPLDQFLVTGHENGELCQWDVKSGNKL 177          
BLAST of FC923115 vs. ExPASy Swiss-Prot
Match: EIF3I_ANOGA (Eukaryotic translation initiation factor 3 subunit I OS=Anopheles gambiae GN=AGAP006607 PE=3 SV=4)

HSP 1 Score: 142.895 bits (359), Expect = 1.411e-33
Identity = 75/185 (40.54%), Postives = 108/185 (58.38%), Query Frame = 2
Query:  113 MRPILMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFM----ELNSAIHVKRIARDPADQGGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLL 655
            M+P++++GH+R +T +KYN++GDL+FS AKD  P+VW++ NGERLGT+ GH GAVWC DV   +  LITG+ D    LW+VETG  L     +S  R+ +F+     A  +TD  M    EL   I V+ I    +       L +   Q +I   +WG L+ T+I+  E+  +RIWD    K L
Sbjct:    1 MKPLMLQGHQRAITQIKYNREGDLIFSSAKDSKPSVWYSLNGERLGTFNGHIGAVWCVDVDWTTTRLITGAGDMNTFLWDVETGTALGKIPCNSSVRTCNFSFSGNQASYSTDRAMNHPCEL-FVIDVRNIDASISSADPVLKLTMNEQQSKITSMLWGALDETVITGHENGSLRIWDLRAVKEL 184          
BLAST of FC923115 vs. ExPASy Swiss-Prot
Match: EIF3I_PICGU (Eukaryotic translation initiation factor 3 subunit I OS=Pichia guilliermondii GN=TIF34 PE=3 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 2.406e-33
Identity = 75/184 (40.76%), Postives = 107/184 (58.15%), Query Frame = 2
Query:  113 MRPILMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRI-ARDPADQGGESVLILKGPQG--RINRAVWGPLNRTIISAGEDAIVRIWDTETGKLL 655
            MRP  + GHER LT +KYN++GDLLFS AKD + +VWFA NGERLGT+ GH G +W  DV  ++   +TGSAD T KLW VETG  ++T+   +P R V F+  +   +  TD  M     I V  +   +P +Q  +  L++    G  ++  A W    + II+  ED +V  +D  TG+ +
Sbjct:    1 MRPFKLMGHERSLTQVKYNQEGDLLFSVAKDSSASVWFASNGERLGTFEGHMGTIWSIDVDSNTHYAVTGSADLTIKLWLVETGECVYTYEMPTPVRRVVFSPDNSKLLSVTDQVMGQVGTISVFDVNNEEPKNQSSKPSLVIPTRDGAKKVTIAGWSAGGKYIIAGHEDGLVSKYDGATGEFI 184          
BLAST of FC923115 vs. ExPASy Swiss-Prot
Match: EIF3I_SCLS1 (Eukaryotic translation initiation factor 3 subunit I OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=tif34 PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 7.000e-33
Identity = 73/182 (40.11%), Postives = 108/182 (59.34%), Query Frame = 2
Query:  113 MRPILMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIARD-PADQGGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLL 655
            MRPIL++GHER LT ++YNKDGD++FS AKD     W+A NGERLGTY GH GA+W  DV   +  + +G+AD T +LW+V+TG  L T++F++  + V+F       +  T+  M     I V  I  D    Q  +  L +   + +   A W  +++ II+  ED  V  +D++TG+LL
Sbjct:    1 MRPILLQGHERALTQIRYNKDGDIIFSTAKDQHICAWYAHNGERLGTYHGHQGAIWTVDVDPTTTIIASGAADNTVRLWDVKTGKCLKTWDFNTAVKRVEFNEDATQLLAVTEQRMGFLGTIVVLDINLDVNGPQSDDRALTITCAESKATVAGWSYMSKYIIAGHEDGSVSQYDSKTGELL 182          
BLAST of FC923115 vs. ExPASy Swiss-Prot
Match: EIF3I_LODEL (Eukaryotic translation initiation factor 3 subunit I OS=Lodderomyces elongisporus GN=TIF34 PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 7.000e-33
Identity = 75/186 (40.32%), Postives = 105/186 (56.45%), Query Frame = 2
Query:  113 MRPILMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIARDPA---DQGGESVLILKGPQ--GRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLL 655
            MRPI + GHER LT +KYN++GDLLFS AKD+  ++W++ NGERLGT  GH G +W  DV  +++   TG  D   KLW VE G  ++T+N  SP R V F+   K  ++  D  M     I V  I RD A   +Q   + L+++  Q   +   A W    R II+  ++  V  +D  TG+LL
Sbjct:    1 MRPIKLMGHERSLTQVKYNREGDLLFSVAKDNAASIWYSSNGERLGTLEGHQGVIWSIDVDPETLLCATGGGDLAVKLWTVENGQCVYTWNSPSPVRRVSFSPDGKKLLVIADQVMGHIGTISVYDINRDTASLTNQAETASLVIETEQNGSKATVAGWSEDGRFIIAGHDNGYVSKYDAHTGELL 186          
BLAST of FC923115 vs. ExPASy Swiss-Prot
Match: EIF3I_VANPO (Eukaryotic translation initiation factor 3 subunit I OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=TIF34 PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.194e-32
Identity = 69/188 (36.70%), Postives = 110/188 (58.51%), Query Frame = 2
Query:  113 MRPILMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIARDPADQG-----GESVLILKGPQGR--INRAVWGPLNRTIISAGEDAIVRIWDTETGKLL 655
            MRPI++ GHERPLT +KYNK+GDL+FSC+KD   +VW++ NGERLGT  GH G +W  DV   + + +TGSAD + K+W V+TG  + T+    P + V+F+      +   D  M    +I+V +++RDP  +       E +L++   +    +  A W    + II+  +D  V  ++ +TG+ +
Sbjct:    1 MRPIMLVGHERPLTQVKYNKEGDLVFSCSKDSVASVWYSINGERLGTLEGHTGTIWSIDVDPFTESCVTGSADYSIKVWKVQTGTVIHTWTAPVPIKRVEFSPCGDYILAVLDDVMRYPGSINVYKVSRDPVTKEIKEFVEEPILVINTQENHKGVTVAGWSAEGKYIIACHKDGKVSKYNAKTGEFI 188          
BLAST of FC923115 vs. ExPASy Swiss-Prot
Match: EIF3I_ASPOR (Eukaryotic translation initiation factor 3 subunit I OS=Aspergillus oryzae GN=tif34 PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.560e-32
Identity = 76/182 (41.76%), Postives = 105/182 (57.69%), Query Frame = 2
Query:  113 MRPILMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRI-ARDPADQGGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLL 655
            MRPIL+ GHER L  +K+N+DGDLLFS AKD     W++ NGERLGTY GH GA+W  DVS +++ L TGSAD T +LWNV+TG  +  ++F +  + V+F       +  T+  M     I V  I   D   Q  E  L +   + +   A W  L + II+  ED  V  +D++TG+ L
Sbjct:    1 MRPILLSGHERSLNQIKFNRDGDLLFSVAKDKIVCAWWSANGERLGTYNGHQGAIWTVDVSPNTVLLATGSADNTVRLWNVKTGECIKVWDFPTAVKRVEFTPDGSRLLAVTEKRMGFLGTIAVLDINYEDLEAQAEEPSLRITCTESKATVAGWSYLAKYIIAGHEDGSVSQYDSKTGEQL 182          
BLAST of FC923115 vs. ExPASy Swiss-Prot
Match: EIF3I_MAGGR (Eukaryotic translation initiation factor 3 subunit I OS=Magnaporthe grisea GN=TIF34 PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.037e-32
Identity = 75/182 (41.21%), Postives = 102/182 (56.04%), Query Frame = 2
Query:  113 MRPILMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAV-GDKLAVITTDPFMELNSAIHVKRIARDPADQGGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLL 655
            MRPIL+ GHER LT +K+N DGDL+FS AKD    VWFA NGERLGTY GH GA+W  D    S  + TGSAD T KLW ++TG  L T+ F +  + V+F+  G +L  +T      L + + +       A+Q  E  + +   + +   A W  L + II+  ED  V  +D + G  L
Sbjct:    1 MRPILLSGHERALTQVKFNPDGDLIFSVAKDQHICVWFAHNGERLGTYHGHQGAIWTVDCDPTSTIIATGSADNTIKLWEIKTGRCLHTWEFPTAVKRVEFSPDGTRLLGVTEKRMGHLGTIVVLDVKLDVDAEQNPERAMTIVCDESKATVAGWSYLAKYIIAGHEDGSVSQYDAKNGDQL 182          
BLAST of FC923115 vs. ExPASy Swiss-Prot
Match: EIF3I_BOTFB (Eukaryotic translation initiation factor 3 subunit I OS=Botryotinia fuckeliana (strain B05.10) GN=tif34 PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.037e-32
Identity = 72/182 (39.56%), Postives = 107/182 (58.79%), Query Frame = 2
Query:  113 MRPILMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIARD-PADQGGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLL 655
            MRPIL++GHER LT ++YN+DGD++FS AKD     W+A NGERLGTY GH GA+W  DV   +  + +G+AD T +LW+V+TG  L T++F++  + V+F       +  T+  M     I V  I  D    Q  +  L +   + +   A W  +++ II+  ED  V  +D +TG+LL
Sbjct:    1 MRPILLQGHERALTQIRYNRDGDIIFSTAKDQHICAWYAHNGERLGTYHGHQGAIWTVDVDPTTTIIASGAADNTVRLWDVKTGKCLKTWDFNTAVKRVEFNEDATQLLAVTEQRMGFLGTIVVLDINLDVNGPQSDDRALTITCAESKATVAGWSYMSKYIIAGHEDGSVSQYDAKTGELL 182          
BLAST of FC923115 vs. ExPASy Swiss-Prot
Match: EIF3I_ASPTN (Eukaryotic translation initiation factor 3 subunit I OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=tif34 PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.037e-32
Identity = 76/183 (41.53%), Postives = 106/183 (57.92%), Query Frame = 2
Query:  113 MRPILMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIARDP--ADQGGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLL 655
            MRPIL+ GHER LT +K+N+DGDLLFS +KD     W+  NGERLGTY GH GAVW  DVS +++ L TGSAD + +LWNV+TG  +  + F +  + V+F+      +  T+  M    AI V  I+ +    +Q  E  L +   + +   A W  L + II+  ED  V  +D +TG  L
Sbjct:    1 MRPILLSGHERSLTQIKFNRDGDLLFSVSKDKIVCAWWTANGERLGTYNGHLGAVWTVDVSPNTVLLATGSADNSVRLWNVKTGECVKVWEFPTAVKRVEFSPDGSQLLAVTEKRMGFLGAISVLDISYEDNFQNQADEPSLRITCNESKATVAGWSYLGKYIIAGHEDGSVSQYDAKTGDQL 183          
The following BLAST results are available for this feature:
BLAST of FC923115 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 94
Match NameE-valueIdentityDescription
EIF3I_NEMVE1.411e-3338.67Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_ANOGA1.411e-3340.54Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_PICGU2.406e-3340.76Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_SCLS17.000e-3340.11Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_LODEL7.000e-3340.32Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_VANPO1.194e-3236.70Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_ASPOR1.560e-3241.76Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_MAGGR2.037e-3241.21Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_BOTFB2.037e-3239.56Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_ASPTN2.037e-3241.53Eukaryotic translation initiation factor 3 subunit... [more]

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Properties
Property NameValue
Genbank descriptionC31701C04EF StrClemenN Citrus clementina cDNA clone C31701C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923115 ID=FC923115; Name=FC923115; organism=Citrus clementina; type=EST; length=662bp
GATCTCTCCCACTAGCTTTGCTTTGCGATCTCAAGGCTTTCCAACGCTCC
ACCGGAAACTCCATTCGTCGCGGAATTCAGGAAAACAGAGAAAGAAGAAG
AAAAAAGCAAGCATGAGACCAATTTTGATGAAAGGCCATGAGAGGCCTTT
AACATATCTTAAATACAACAAAGACGGAGATCTGCTCTTTTCATGTGCTA
AGGATCACACACCCACCGTTTGGTTCGCTGACAACGGCGAGCGTCTTGGC
ACATACCGTGGCCACAACGGCGCCGTTTGGTGCTGCGATGTTTCAAGAGA
TTCGATGACGCTAATAACCGGGAGTGCTGACCAGACGGCGAAGCTATGGA
ATGTTGAAACAGGGGCTCAGTTGTTCACATTCAATTTTGATTCTCCAGCT
AGGTCTGTCGACTTTGCTGTTGGTGATAAGCTTGCTGTGATTACTACTGA
TCCTTTCATGGAATTAAACTCAGCCATTCATGTCAAACGCATTGCAAGAG
ATCCTGCTGATCAGGGTGGTGAATCTGTGCTTATTCTAAAAGGCCCTCAG
GGAAGAATAAACAGAGCAGTTTGGGGACCGCTAAACAGGACTATCATTAG
TGCTGGAGAAGATGCTATAGTTCGTATTTGGGATACTGAGACAGGGAAAC
TGCTTNAAGAGT
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