FC923115
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923115 vs. ExPASy Swiss-Prot
Match: WDR5_RAT (WD repeat-containing protein 5 OS=Rattus norvegicus GN=Wdr5 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.162e-11 Identity = 47/177 (26.55%), Postives = 90/177 (50.85%), Query Frame = 2 Query: 128 MKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDS-PARSVDFAVGDKLAVITTDPFMELNSAIHVKRIARDPADQGGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLL 655 + GH+ ++ + ++ D +LL S + D T +W +G+ L T +GH+ V+CC+ + S +++GS D++ ++W+V+TG L T S P +V F L V +S + RI + Q ++++ P ++ + P + I++A D +++WD GK L Sbjct: 83 ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIV--------SSSYDGLCRIWDTASGQCLKTLIDDDNPP--VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL 249
BLAST of FC923115 vs. ExPASy Swiss-Prot
Match: WDR5_MOUSE (WD repeat-containing protein 5 OS=Mus musculus GN=Wdr5 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.162e-11 Identity = 47/177 (26.55%), Postives = 90/177 (50.85%), Query Frame = 2 Query: 128 MKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDS-PARSVDFAVGDKLAVITTDPFMELNSAIHVKRIARDPADQGGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLL 655 + GH+ ++ + ++ D +LL S + D T +W +G+ L T +GH+ V+CC+ + S +++GS D++ ++W+V+TG L T S P +V F L V +S + RI + Q ++++ P ++ + P + I++A D +++WD GK L Sbjct: 83 ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIV--------SSSYDGLCRIWDTASGQCLKTLIDDDNPP--VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL 249
BLAST of FC923115 vs. ExPASy Swiss-Prot
Match: WDR5_HUMAN (WD repeat-containing protein 5 OS=Homo sapiens GN=WDR5 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.162e-11 Identity = 47/177 (26.55%), Postives = 90/177 (50.85%), Query Frame = 2 Query: 128 MKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDS-PARSVDFAVGDKLAVITTDPFMELNSAIHVKRIARDPADQGGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLL 655 + GH+ ++ + ++ D +LL S + D T +W +G+ L T +GH+ V+CC+ + S +++GS D++ ++W+V+TG L T S P +V F L V +S + RI + Q ++++ P ++ + P + I++A D +++WD GK L Sbjct: 83 ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIV--------SSSYDGLCRIWDTASGQCLKTLIDDDNPP--VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL 249
BLAST of FC923115 vs. ExPASy Swiss-Prot
Match: WDR5_BOVIN (WD repeat-containing protein 5 OS=Bos taurus GN=WDR5 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.162e-11 Identity = 47/177 (26.55%), Postives = 90/177 (50.85%), Query Frame = 2 Query: 128 MKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDS-PARSVDFAVGDKLAVITTDPFMELNSAIHVKRIARDPADQGGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLL 655 + GH+ ++ + ++ D +LL S + D T +W +G+ L T +GH+ V+CC+ + S +++GS D++ ++W+V+TG L T S P +V F L V +S + RI + Q ++++ P ++ + P + I++A D +++WD GK L Sbjct: 83 ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIV--------SSSYDGLCRIWDTASGQCLKTLIDDDNPP--VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL 249
BLAST of FC923115 vs. ExPASy Swiss-Prot
Match: TAF5L_MOUSE (TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L OS=Mus musculus GN=Taf5l PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.162e-11 Identity = 51/181 (28.18%), Postives = 83/181 (45.86%), Query Frame = 2 Query: 125 LMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTF-NFDSPARSVDFAVGDK-LAVITTDPFMELNSAIHVKRIARDPADQGGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLLXE 661 +++GH P+ ++ D L SC++D + W + Y+GH VW D+S S+ +GS D+TA+LW+ + L + + V F LA +TD + L SA Q G SV + G +G + + P + + SAGED +++WD +G L E Sbjct: 337 ILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSA------------QQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKE 505
BLAST of FC923115 vs. ExPASy Swiss-Prot
Match: SEL10_CAEBR (F-box/WD repeat-containing protein sel-10 OS=Caenorhabditis briggsae GN=sel-10 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.162e-11 Identity = 52/188 (27.66%), Postives = 87/188 (46.28%), Query Frame = 2 Query: 116 RPIL----MKGHERP-LTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFM---ELNSAIHVKRIARDPADQGGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLL 655 RPI+ ++GHE +T ++ + D LL + + D+T VW D+GE T GH+G VW +S+ +++GS D+T K+W E G L T + L + D + ++ + +HV+ + QG ++ + G I ++S G D V+IWD +GK L Sbjct: 245 RPIMGSAILRGHEEHVITCMQIHND--LLVTGSDDNTLKVWSIDDGEVKHTLNGHSGGVWTSQISQCGRYIVSGSTDRTVKVWRAEDGFLLHTLQGHTSTVRCMAMANTTLVTGSRDCTLRVWDIETGLHVRTL------QGHQAAVRCVQFDGNI-----------VVSGGYDFTVKIWDAFSGKCL 413
BLAST of FC923115 vs. ExPASy Swiss-Prot
Match: WDR69_DANRE (WD repeat-containing protein 69 OS=Danio rerio GN=wdr69 PE=2 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.518e-11 Identity = 51/177 (28.81%), Postives = 82/177 (46.33%), Query Frame = 2 Query: 128 MKGHERPLTYLKYNKD-GDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIARDPADQGGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLL 655 ++GH + + +N GD + + + D T +W A+ G+ T+RGH + C + S + TGS D TAKLW+VE+G ++ T + FA L TT + S H + P+ G V +L G +G I+ + I +A D ++WD E G+ L Sbjct: 130 LEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTL-------AGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPS---GRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCL 296
BLAST of FC923115 vs. ExPASy Swiss-Prot
Match: Y2124_ANASP (Uncharacterized WD repeat-containing protein all2124 OS=Anabaena sp. (strain PCC 7120) GN=all2124 PE=4 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.982e-11 Identity = 48/178 (26.97%), Postives = 80/178 (44.94%), Query Frame = 2 Query: 128 MKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTF-NFDSPARSVDFAV-GDKLAVITTDPFMELNSAIHVKRIARDPADQGGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLL 655 ++GH+ + + ++DG + S + D T +W D G T GH AV+ S D T+ +G +D+T KLW G L T + +V F+ G LA ++D ++L G+ ++ L G + + P +TI + ED V++W + GKLL Sbjct: 1068 LEGHKDGVISISISRDGQTIASGSLDKTIKLWSRD-GRLFRTLNGHEDAVYSVSFSPDGQTIASGGSDKTIKLWQTSDGTLLKTITGHEQTVNNVYFSPDGKNLASASSDHSIKLWDT------------TSGQLLMTLTGHSAGVITVRFSPDGQTIAAGSEDKTVKLWHRQDGKLL 1232 HSP 2 Score: 67.3958 bits (163), Expect = 7.531e-11 Identity = 50/169 (29.59%), Postives = 77/169 (45.56%), Query Frame = 2 Query: 134 GHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFN-FDSPARSVDFAV-GDKLAVITTDPFMELNSAIHVKRIARDPADQGGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWD 634 GHE+ + + ++ DG L S + DH+ +W +G+ L T GH+ V S D T+ GS D+T KLW+ + G L T N S+ F+ G LA + D I + RIA G+ V LKG + + + I SA D +++W+ Sbjct: 1153 GHEQTVNNVYFSPDGKNLASASSDHSIKLWDTTSGQLLMTLTGHSAGVITVRFSPDGQTIAAGSEDKTVKLWHRQDGKLLKTLNGHQDWVNSLSFSPDGKTLASASAD------KTIKLWRIA------DGKLVKTLKGHNDSVWDVNFSSDGKAIASASRDNTIKLWN 1309
BLAST of FC923115 vs. ExPASy Swiss-Prot
Match: Y2800_ANASP (Uncharacterized WD repeat-containing protein alr2800 OS=Anabaena sp. (strain PCC 7120) GN=alr2800 PE=4 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.588e-11 Identity = 49/179 (27.37%), Postives = 80/179 (44.69%), Query Frame = 2 Query: 128 MKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTF-NFDSPARSVDFAVGDKLAVI-TTDPFMEL-NSAIHVKRIARDPADQGGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLL 655 + GH + + ++ DG+ L S A DHT +W G+ L T + H G V S D TL +GS D+T K+WN TG L T+ + S+ ++ K+ V + D ++L + H+ + L G + + P +T+ D VR+W+ TG+ L Sbjct: 764 LTGHTDWVRCVAFSPDGNTLASSAADHTIKLWDVSQGKCLRTLKSHTGWVRSVAFSADGQTLASGSGDRTIKIWNYHTGECLKTYIGHTNSVYSIAYSPDSKILVSGSGDRTIKLWDCQTHI-------------CIKTLHGHTNEVCSVAFSPDGQTLACVSLDQSVRLWNCRTGQCL 929 HSP 2 Score: 68.5514 bits (166), Expect = 3.381e-11 Identity = 46/180 (25.56%), Postives = 80/180 (44.44%), Query Frame = 2 Query: 122 ILMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSP-ARSVDFAV-GDKLAVITTDPFMELNSAIHVKRIARDPADQGGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLL 655 ++ +GH + ++ ++ DG++L SC D +W +G + T GH V+ D TL + S D+T KLW+++ G L T + R V F+ G+ LA D ++L G+ + LK G + + +T+ S D ++IW+ TG+ L Sbjct: 678 LICRGHSNWVRFVVFSPDGEILASCGADENVKLWSVRDGVCIKTLTGHEHEVFSVAFHPDGETLASASGDKTIKLWDIQDGTCLQTLTGHTDWVRCVAFSPDGNTLASSAADHTIKLWDV------------SQGKCLRTLKSHTGWVRSVAFSADGQTLASGSGDRTIKIWNYHTGECL 845 HSP 3 Score: 67.0106 bits (162), Expect = 9.836e-11 Identity = 49/174 (28.16%), Postives = 78/174 (44.83%), Query Frame = 2 Query: 128 MKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSP-ARSVDF-AVGDKLAVITTDPFMELNSAIHVKRIARDPADQGGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTET 643 + GHE + + ++ DG+ L S + D T +W +G L T GH V C S D TL + +AD T KLW+V G L T + RSV F A G LA + D +++ + GE + G + + P ++ ++S D +++WD +T Sbjct: 722 LTGHEHEVFSVAFHPDGETLASASGDKTIKLWDIQDGTCLQTLTGHTDWVRCVAFSPDGNTLASSAADHTIKLWDVSQGKCLRTLKSHTGWVRSVAFSADGQTLASGSGDRTIKIWNY------------HTGECLKTYIGHTNSVYSIAYSPDSKILVSGSGDRTIKLWDCQT 883
BLAST of FC923115 vs. ExPASy Swiss-Prot
Match: SNR40_HUMAN (U5 small nuclear ribonucleoprotein 40 kDa protein OS=Homo sapiens GN=SNRNP40 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.415e-11 Identity = 37/97 (38.14%), Postives = 51/97 (52.58%), Query Frame = 2 Query: 128 MKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLI-TGSADQTAKLWNVETGAQLFTFNFDSPARSVDF 415 +KGH + L YN DG +LFS + D T VW ++ GER+ +GH V C +R L+ TGS D T KLW++ A + TF +V F Sbjct: 105 LKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTF 201 The following BLAST results are available for this feature:
BLAST of FC923115 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 94
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923115 ID=FC923115; Name=FC923115; organism=Citrus clementina; type=EST; length=662bpback to top |