FC923116

Overview
NameFC923116
Unique NameFC923116
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923116 vs. ExPASy Swiss-Prot
Match: MLR_HALRO (Myosin regulatory light chain, smooth muscle OS=Halocynthia roretzi PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.742e-16
Identity = 44/138 (31.88%), Postives = 76/138 (55.07%), Query Frame = 2
Query:   92 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 505
            QI EFKEAF++ D + DG I  ++L     SLG+   +  ++DM+    A+ +G ++F  FL L   K+  TD EE + EAF++ D D  G I+   L  +M    ++ +  EV++M   + +D  G ++Y+    ++
Sbjct:   13 QIQEFKEAFTMIDANRDGFIDQEDLKDTYASLGRGIKDERIRDML----AESSGPVNFQIFLGLFGDKLSGTDPEETILEAFKILDADNKGVINKNYLAEIMMTQADRFSQSEVNQMFDISPIDVAGNLDYKSLCYII 146          
BLAST of FC923116 vs. ExPASy Swiss-Prot
Match: CML34_ARATH (Probable calcium-binding protein CML34 OS=Arabidopsis thaliana GN=CML34 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.742e-16
Identity = 48/134 (35.82%), Postives = 74/134 (55.22%), Query Frame = 2
Query:  107 KEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMM 508
            K  F  FDK+ DG ++  E   V  +     T+ ++     E+D DGNG ++  EF + +         E+ LKE F   D D +G I A+E    MT+LG+K T+E   E +R ADVDGDG +N++EF+ +++
Sbjct:    4 KRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCI---------EKMLKEVFVFCDVDGDGKIPASESYVTMTSLGKKFTEETSAEKVRAADVDGDGYLNFDEFMALVI 128          
BLAST of FC923116 vs. ExPASy Swiss-Prot
Match: MLR1_SCHPO (Myosin regulatory light chain 1 OS=Schizosaccharomyces pombe GN=rlc1 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.276e-16
Identity = 50/140 (35.71%), Postives = 77/140 (55.00%), Query Frame = 2
Query:   77 QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 496
            QLT  QI E KEAF+L DKDGDG I  +++ T++ SL Q+ +E    D IN +    N  I+   FL  M   +       +L EAF  FD  Q+G I  + +R  ++++G+++  +EV+ ++R       G   YE+FV
Sbjct:   41 QLTSSQIQELKEAFALLDKDGDGNIGREDVKTMLTSLNQDASE----DSINHMFESINPPINLAAFLTAMGSMLCRISPRNDLLEAFSTFDDTQSGKIPISTMRDALSSMGDRMDPQEVESILR--SYTSHGVFYYEKFV 174          
BLAST of FC923116 vs. ExPASy Swiss-Prot
Match: CANB_CRYNE (Calcineurin subunit B OS=Cryptococcus neoformans GN=CNB1 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.276e-16
Identity = 51/143 (35.66%), Postives = 82/143 (57.34%), Query Frame = 2
Query:   92 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL-GEKLTDEE----VDEMIREADVDGDGQINYEEFVKVM 505
            ++   K+ F   DKDG G I   E   + + +  NP       MI   D DG+GT+DF EF+  ++        +E+L+ AF+V+D D++G+IS  EL  V+  + G  L D++    VD+ I EAD DGDG++++EEF +++
Sbjct:   22 ELMRLKKRFMKLDKDGSGSIDKDEFLQIPQ-IANNPLAHR---MIAIFDEDGSGTVDFQEFVGGLSAFSSKGGRDEKLRFAFKVYDMDRDGYISNGELYLVLKQMVGNNLKDQQLQQIVDKTIMEADKDGDGKLSFEEFTQMV 160          
BLAST of FC923116 vs. ExPASy Swiss-Prot
Match: MLRB_PATYE (Myosin regulatory light chain B, smooth adductor muscle OS=Patinopecten yessoensis PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.972e-16
Identity = 46/143 (32.17%), Postives = 82/143 (57.34%), Query Frame = 2
Query:   77 QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 505
            +L   QI E KEAF++ D++ DG I   +L  +  SLG+ P + EL  M+ E      G ++F  FL++ + K+  TD+EE L+ AF +FD+     ++   ++ ++ N+G+  T +E+    +EA V G G+ +Y +F  ++
Sbjct:   11 KLPQKQIQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEAP----GPLNFTMFLSIFSDKLSGTDTEETLRNAFAMFDELDTKKLNIEYIKDLLENMGDNFTKDEMRMTFKEAPVTG-GKFDYVKFTAMI 148          
BLAST of FC923116 vs. ExPASy Swiss-Prot
Match: CML21_ORYSJ (Probable calcium-binding protein CML21 OS=Oryza sativa subsp. japonica GN=CML21 PE=2 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 2.972e-16
Identity = 57/153 (37.25%), Postives = 81/153 (52.94%), Query Frame = 2
Query:  107 KEAFSLFDKDGDGCITTKELGTVMRSLGQN----PTEAELQDMINEVDADGNGTIDFPEFLNL------------MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLG--EKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 511
            +  F +FD+DGDG IT  EL   +  LG      P  A L  ++    A G   + F EF  L            +A    + + E +++EAF VFD+D +G+ISAAEL+ V++ +G  E      V +MI  AD D DG+++YEEF K MMA
Sbjct:   43 RRVFEMFDRDGDGVITPAELSGALCRLGARGEAPPAAAALDAVVAAYIAPGMAGLRFAEFEALHAELAGLGGRQAVAAAEAEEEKEADMREAFGVFDEDGDGYISAAELQAVLSRMGLPEAACMARVRDMIAAADRDSDGRVDYEEF-KAMMA 194          
BLAST of FC923116 vs. ExPASy Swiss-Prot
Match: CDPKO_ARATH (Calcium-dependent protein kinase 24 OS=Arabidopsis thaliana GN=CPK24 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.882e-16
Identity = 47/152 (30.92%), Postives = 89/152 (58.55%), Query Frame = 2
Query:   65 IMADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKL-----TDEEVDEMIREADVDGDGQINYEEFVKVM 505
            I+AD L +++I+   + F   D D +G +T +EL   ++ +GQ   + +++ +++  D DGNG +   EF+ L    +K    +E L+EAF+ FDK+ NGFI   EL+  + +  +KL      D+ + ++  + D++ DG+I+++EF  +M
Sbjct:  359 IVADNLPNEEIAAIVQMFQTMDTDKNGHLTFEELRDGLKKIGQVVPDGDVKMLMDAADTDGNGMLSCDEFVTLSIH-LKRMGCDEHLQEAFKYFDKNGNGFIELDELKVALCD--DKLGHANGNDQWIKDIFFDVDLNKDGRISFDEFKAMM 507          
BLAST of FC923116 vs. ExPASy Swiss-Prot
Match: CANB_ASHGO (Calcineurin subunit B OS=Ashbya gossypii GN=CNB1 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.070e-16
Identity = 52/153 (33.99%), Postives = 86/153 (56.21%), Query Frame = 2
Query:   65 IMADQLTD-----DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM-TNLGEKLTDEE----VDEMIREADVDGDGQINYEEF 493
            I+ D L D     ++I   ++ F   D+D  G I   E  ++   +  NP    + ++    DAD +G +DF EF++ ++     +D EE+L+ AF+++D D++G+IS  EL  V+   +G  L DE+    VD  I E DVDGDG++++EEF
Sbjct:    8 ILEDLLDDTNFDREEIERLRKRFMKLDRDSSGSIDKNEFMSIP-GVSSNPLAGRIMEVF---DADNSGDVDFQEFISGLSVFSGRSDKEEKLRFAFKIYDIDKDGYISNGELFIVLKIMVGNNLEDEQLQQVVDRTIMENDVDGDGKLSFEEF 156          
BLAST of FC923116 vs. ExPASy Swiss-Prot
Match: MYL10_MOUSE (Myosin regulatory light chain 10 OS=Mus musculus GN=Myl10 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.621e-16
Identity = 47/139 (33.81%), Postives = 75/139 (53.96%), Query Frame = 2
Query:   92 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQ-NPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 505
            QI EFKEAF++ D++ DG I  ++L     +LG+ N    EL+ M+ E      G I+F  FL +   K+K TD EE +  AF+VFD +  GF+ A  ++  +    ++ ++EEV +M      D  G ++Y     V+
Sbjct:   61 QIQEFKEAFTIMDQNRDGFIDKEDLRDTFAALGRINVKNEELEAMVKEAP----GPINFTVFLTMFGEKLKGTDPEETILHAFKVFDTEGKGFVKADFIKEKLMTQADRFSEEEVKQMFAAFPPDVCGNLDYRNLCYVI 195          
BLAST of FC923116 vs. ExPASy Swiss-Prot
Match: MLRB_CHICK (Myosin regulatory light chain 2B, cardiac muscle isoform OS=Gallus gallus PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 6.621e-16
Identity = 46/139 (33.09%), Postives = 75/139 (53.96%), Query Frame = 2
Query:   92 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQ-NPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 505
            QI EFKEAF++ D++ DG I   +L     +LG+ N    EL+DM+ E      G I+F  FL +   K+K TD EE +  AF++FD +  G I A  ++ ++     + + EE+++M      D  G ++Y+    V+
Sbjct:   24 QIQEFKEAFTIMDQNRDGFIDKADLRDTFAALGRLNVKNEELEDMVKEAP----GPINFTVFLTMFGEKLKGTDPEETILNAFKIFDPEGKGHIKADYIKEMLMTQEGRFSQEEINQMFAAFPPDVSGNLDYKNLCYVI 158          
The following BLAST results are available for this feature:
BLAST of FC923116 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 482
Match NameE-valueIdentityDescription
MLR_HALRO1.742e-1631.88Myosin regulatory light chain, smooth muscle OS=Ha... [more]
CML34_ARATH1.742e-1635.82Probable calcium-binding protein CML34 OS=Arabidop... [more]
MLR1_SCHPO2.276e-1635.71Myosin regulatory light chain 1 OS=Schizosaccharom... [more]
CANB_CRYNE2.276e-1635.66Calcineurin subunit B OS=Cryptococcus neoformans G... [more]
MLRB_PATYE2.972e-1632.17Myosin regulatory light chain B, smooth adductor m... [more]
CML21_ORYSJ2.972e-1637.25Probable calcium-binding protein CML21 OS=Oryza sa... [more]
CDPKO_ARATH3.882e-1630.92Calcium-dependent protein kinase 24 OS=Arabidopsis... [more]
CANB_ASHGO5.070e-1633.99Calcineurin subunit B OS=Ashbya gossypii GN=CNB1 P... [more]
MYL10_MOUSE6.621e-1633.81Myosin regulatory light chain 10 OS=Mus musculus G... [more]
MLRB_CHICK6.621e-1633.09Myosin regulatory light chain 2B, cardiac muscle i... [more]

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Properties
Property NameValue
Genbank descriptionC31701C05EF StrClemenN Citrus clementina cDNA clone C31701C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923116 ID=FC923116; Name=FC923116; organism=Citrus clementina; type=EST; length=698bp
GACAACCAAAAACGAGAGAAGTAAACACGGGAGCAGCTCTGTTTCTGTAT
AAGTTTTCTCAACGATAATGGCTGATCAACTCACCGATGATCAGATCTCT
GAATTTAAGGAAGCCTTCAGCCTCTTTGACAAGGATGGAGACGGGTGTAT
TACTACTAAGGAGCTTGGAACTGTTATGAGGTCACTCGGGCAGAACCCTA
CCGAAGCAGAACTCCAGGATATGATTAATGAAGTCGATGCTGACGGGAAT
GGTACCATTGACTTCCCGGAGTTCCTTAACTTGATGGCGCGCAAGATGAA
GGACACTGATTCAGAGGAGGAGTTAAAGGAGGCTTTTCGGGTTTTTGATA
AGGATCAGAATGGGTTCATTTCTGCTGCTGAACTCCGCCATGTGATGACA
AATCTTGGTGAGAAGTTGACTGATGAGGAAGTTGATGAGATGATTCGTGA
AGCTGATGTGGATGGTGATGGCCAGATCAATTATGAAGAGTTTGTTAAAG
TCATGATGGCCAAGTGAGAACCTCTCAACTATCACTTAAAAAAAAAATAA
TAAATAAATATCAAAATCAAAAGACTAAAAAATCAAAGTGAAGAGTGCAG
TTGTGACATCCTACATCGATCTAAAGAGGTCTTGGCTTGTTTAATATCCT
GTGAGCTCCTTGACTTGTGGTTGTGTTTAGGGTTGCAAGTCATCAAAT
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