FC923116

Overview
NameFC923116
Unique NameFC923116
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923116 vs. ExPASy Swiss-Prot
Match: CML35_ARATH (Probable calcium-binding protein CML35 OS=Arabidopsis thaliana GN=CML35 PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 6.621e-16
Identity = 51/147 (34.69%), Postives = 81/147 (55.10%), Query Frame = 2
Query:   77 QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSE-EELKEAFRVFDKDQNGFISAAELRHVMTNLG-EKLTDEEVDEMIREADVDGDGQINYEEFVKVMM 508
            Q + D  +E  +AF L D+D DG ++  +L  ++  L   P ++ E+  M+ EVD    G I   +  + +A    +   E EEL+E F +FD D+NG ISA EL  V   +G E+ T EE   MI   D +GDG + +++F ++M+
Sbjct:   62 QNSGDFYTELVQAFKLIDRDDDGVVSRGDLAALISRLSHEPPSQEEVSLMLREVDGGDGGCISLEDLASRVAGTSGEGSVETEELREVFEIFDVDRNGKISAEELHRVFGVIGDERCTLEECMRMIATVDGNGDGFVCFDDFCRMMV 208          
BLAST of FC923116 vs. ExPASy Swiss-Prot
Match: CANB_NEUCR (Calcineurin subunit B OS=Neurospora crassa GN=cnb-1 PE=2 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 6.621e-16
Identity = 50/144 (34.72%), Postives = 82/144 (56.94%), Query Frame = 2
Query:   89 DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM-----TNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 505
            +++   ++ F   DKD  G I  +E      SL Q  T      MI   D DG G +DF EF++ ++      + E++L+ AF+V+D D++G+IS  EL  V+     +NL ++   + VD+ I EAD+D DG+I++EEF K++
Sbjct:   21 EEVDRLRKRFMKLDKDNSGTIEREEF----LSLPQISTNPLATRMIAIFDEDGGGDVDFQEFVSGLSAFSSKGNKEQKLRFAFKVYDIDRDGYISNGELFIVLKMMVGSNLKDQQLQQIVDKTIMEADLDKDGKISFEEFTKMV 160          
BLAST of FC923116 vs. ExPASy Swiss-Prot
Match: CML33_ARATH (Probable calcium-binding protein CML33 OS=Arabidopsis thaliana GN=CML33 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.648e-16
Identity = 47/127 (37.01%), Postives = 75/127 (59.06%), Query Frame = 2
Query:  110 EAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDT--DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINY 484
            + F  FD   DG I+ +E    + +L  +    +L +M  ++D +G+G +D  +F + M +  + +  D E+ELK+AF+++D + +G ISA EL  VMT LGEK T E    M++  DVDGDG I +
Sbjct:    8 DIFERFDTSKDGKISWEEFRDAIHALSPSIPSEKLVEMFIQLDTNGDGQVDAAKFASCMDQTAQSSGGDVEKELKDAFKLYDINCDGKISANELHVVMTRLGEKCTVESCVGMVQAIDVDGDGYIRF 134          
BLAST of FC923116 vs. ExPASy Swiss-Prot
Match: CANB_SCHPO (Calcineurin subunit B OS=Schizosaccharomyces pombe GN=cnb1 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.475e-15
Identity = 51/152 (33.55%), Postives = 83/152 (54.61%), Query Frame = 2
Query:   65 IMADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM-----TNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 505
            I     ++++I   ++ F   D +  G I   E  ++  S+  NP  + L    + VD DG G +DF EF+N ++      + EE+LK AF+++D D++G+IS  EL  V+     TNL E    + VD+ I E D D DG+I++EEF  ++
Sbjct:   13 ISNSSFSNEEIERIRKRFIKIDANQSGSIDRNEFLSIP-SVASNPLASRL---FSVVDEDGGGDVDFQEFINSLSVFSVHGNKEEKLKFAFKIYDIDRDGYISNGELYLVLKMMVGTNLREDQLQQIVDKTIMEVDKDRDGKISFEEFKDIV 160          
BLAST of FC923116 vs. ExPASy Swiss-Prot
Match: CANB1_NAEGR (Calcineurin subunit B OS=Naegleria gruberi GN=CNB1 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.475e-15
Identity = 50/146 (34.25%), Postives = 84/146 (57.53%), Query Frame = 2
Query:   83 TDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM-----TNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 505
            T  +I +  + F   DKDG+G I+  E   ++  L  NP    ++ +I+  D +G+G+++F EF+  ++      D + +L+ AF+V+D D +G+IS  EL  V+      NL +    + VD+ I EAD DGDG+I++EEF K +
Sbjct:   23 TQKEIKKLYKRFKKLDKDGNGTISKDEF-LMIPELAVNPL---VKRVISIFDENGDGSVNFKEFIAALSVFNAQGDKQRKLEFAFKVYDIDGDGYISNGELFTVLKMMVGNNLSDVQLQQIVDKTILEADEDGDGKISFEEFAKTL 164          
BLAST of FC923116 vs. ExPASy Swiss-Prot
Match: MLRA_HUMAN (Myosin regulatory light chain 2, atrial isoform OS=Homo sapiens GN=MYL7 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.927e-15
Identity = 48/139 (34.53%), Postives = 72/139 (51.80%), Query Frame = 2
Query:   92 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQ-NPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 505
            QI EFKEAFS  D++ DG I   +L      LG+ +  E EL  M+ E    G G I+F  FL L   K+  TD EE +  AFR+FD    G ++  E + ++    +K +  EV++M     +D  G I+Y+    ++
Sbjct:   33 QIQEFKEAFSCIDQNRDGIICKADLRETYSQLGKVSVPEEELDAMLQE----GKGPINFTVFLTLFGEKLNGTDPEEAILSAFRMFDPSGKGVVNKDEFKQLLLTQADKFSPAEVEQMFALTPMDLAGNIDYKSLCYII 167          
BLAST of FC923116 vs. ExPASy Swiss-Prot
Match: LPS1B_LYTPI (Calcium-binding protein LPS1-beta (Fragment) OS=Lytechinus pictus PE=2 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.927e-15
Identity = 54/150 (36.00%), Postives = 81/150 (54.00%), Query Frame = 2
Query:   68 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDT-DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 514
            M  ++ D    EFK+ +   D + DG ++  EL  +M     +  E E Q +I  VD + +G + F EFL  M    K+   S +E+K+ F   DKD NG IS  EL   +  +  KL +   +++I+EAD DGDG +N EEFV  ++AK
Sbjct:   12 MPKEVIDAMKQEFKDNY---DTNKDGTVSCAELAKLM-----DCPEEEAQRIITGVDVNCDGRMQFDEFLLYMEGYTKERLYSSDEIKQMFDDLDKDGNGRISPDELSKGVGEISTKLVEGMANKLIQEADKDGDGHVNMEEFVDTLVAK 153          

HSP 2 Score: 70.8626 bits (172), Expect = 7.576e-12
Identity = 41/134 (30.60%), Postives = 73/134 (54.48%), Query Frame = 2
Query:  101 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV-FDKDQNGFISAAELRHVMT-NLGEKLTDEEVDEMIREADVDGDGQINYEEFV 496
            E K+ F   DKDG+G I+  EL   +  +     E     +I E D DG+G ++  EF++ +  K+         K+ F   FDK+ +G ++ AE+  ++  NL  + ++E ++EMI   D++GDG++ + EF+
Sbjct:   89 EIKQMFDDLDKDGNGRISPDELSKGVGEISTKLVEGMANKLIQEADKDGDGHVNMEEFVDTLVAKLPLC-----FKKCFHEDFDKNGDGSLTNAEMSQLLNRNLPGQYSEELINEMISRVDLNGDGRVQFGEFL 217          
BLAST of FC923116 vs. ExPASy Swiss-Prot
Match: CANB_CANGA (Calcineurin subunit B OS=Candida glabrata GN=CNB1 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.927e-15
Identity = 50/150 (33.33%), Postives = 82/150 (54.67%), Query Frame = 2
Query:   62 TIMADQLTD-DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM-----TNLGEKLTDEEVDEMIREADVDGDGQINYEEF 493
            T++ D   D D+I   ++ F   D+D  G I   E  ++   +  NP    + ++    DAD +G +DF EF+  ++        +E+LK AF+++D D++G IS  EL  V+     +NL +K   + VD  I E D+DGDGQ+++EEF
Sbjct:   11 TLLEDTNFDRDEIERLRKRFMKLDRDSSGSIDKNEFMSIP-GVSANPLAGRIMEVF---DADNSGDVDFQEFITGLSIFSGRGSKDEKLKFAFKIYDIDKDGLISNGELFIVLKIMVGSNLDDKQLQQIVDRTIMENDLDGDGQLSFEEF 156          
BLAST of FC923116 vs. ExPASy Swiss-Prot
Match: MLR_DROME (Myosin regulatory light chain 2 OS=Drosophila melanogaster GN=Mlc2 PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 2.516e-15
Identity = 50/146 (34.25%), Postives = 77/146 (52.74%), Query Frame = 2
Query:   92 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDT---DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK*E 520
            QI+EFKEAF L D D DG I   +L     S+G+   + EL  M+ E     +G I+F + L L A +M  +   D +E +  AF+ FD D  G I   + R ++ N G+K T +EVD+   +  +D   QI+    ++++  K E
Sbjct:   76 QIAEFKEAFQLMDADKDGIIGKNDLRAAFDSVGKIANDKELDAMLGE----ASGPINFTQLLTLFANRMATSGANDEDEVVIAAFKTFDND--GLIDGDKFREMLMNFGDKFTMKEVDDAYDQMVIDDKNQIDTAALIEMLTGKGE 215          
BLAST of FC923116 vs. ExPASy Swiss-Prot
Match: MLRA_MOUSE (Myosin regulatory light chain 2, atrial isoform OS=Mus musculus GN=Myl7 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.516e-15
Identity = 47/139 (33.81%), Postives = 72/139 (51.80%), Query Frame = 2
Query:   92 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQ-NPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 505
            QI EFKEAFS  D++ DG I   +L      LG+ +  E EL  M+ E    G G I+F  FL L   K+  TD EE +  AFR+FD    G ++  E + ++    +K +  EV+++     +D  G I+Y+    ++
Sbjct:   33 QIQEFKEAFSCIDQNRDGIICKSDLKETYSQLGRVSVPEEELDAMLQE----GKGPINFTVFLTLFGEKLNGTDPEEAILSAFRMFDPSGQGVVNKEEFKQLLMTQADKFSPAEVEQLFALTPMDLAGNIDYKSLCYII 167          
The following BLAST results are available for this feature:
BLAST of FC923116 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 482
Match NameE-valueIdentityDescription
CML35_ARATH6.621e-1634.69Probable calcium-binding protein CML35 OS=Arabidop... [more]
CANB_NEUCR6.621e-1634.72Calcineurin subunit B OS=Neurospora crassa GN=cnb-... [more]
CML33_ARATH8.648e-1637.01Probable calcium-binding protein CML33 OS=Arabidop... [more]
CANB_SCHPO1.475e-1533.55Calcineurin subunit B OS=Schizosaccharomyces pombe... [more]
CANB1_NAEGR1.475e-1534.25Calcineurin subunit B OS=Naegleria gruberi GN=CNB1... [more]
MLRA_HUMAN1.927e-1534.53Myosin regulatory light chain 2, atrial isoform OS... [more]
LPS1B_LYTPI1.927e-1536.00Calcium-binding protein LPS1-beta (Fragment) OS=Ly... [more]
CANB_CANGA1.927e-1533.33Calcineurin subunit B OS=Candida glabrata GN=CNB1 ... [more]
MLR_DROME2.516e-1534.25Myosin regulatory light chain 2 OS=Drosophila mela... [more]
MLRA_MOUSE2.516e-1533.81Myosin regulatory light chain 2, atrial isoform OS... [more]

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Properties
Property NameValue
Genbank descriptionC31701C05EF StrClemenN Citrus clementina cDNA clone C31701C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923116 ID=FC923116; Name=FC923116; organism=Citrus clementina; type=EST; length=698bp
GACAACCAAAAACGAGAGAAGTAAACACGGGAGCAGCTCTGTTTCTGTAT
AAGTTTTCTCAACGATAATGGCTGATCAACTCACCGATGATCAGATCTCT
GAATTTAAGGAAGCCTTCAGCCTCTTTGACAAGGATGGAGACGGGTGTAT
TACTACTAAGGAGCTTGGAACTGTTATGAGGTCACTCGGGCAGAACCCTA
CCGAAGCAGAACTCCAGGATATGATTAATGAAGTCGATGCTGACGGGAAT
GGTACCATTGACTTCCCGGAGTTCCTTAACTTGATGGCGCGCAAGATGAA
GGACACTGATTCAGAGGAGGAGTTAAAGGAGGCTTTTCGGGTTTTTGATA
AGGATCAGAATGGGTTCATTTCTGCTGCTGAACTCCGCCATGTGATGACA
AATCTTGGTGAGAAGTTGACTGATGAGGAAGTTGATGAGATGATTCGTGA
AGCTGATGTGGATGGTGATGGCCAGATCAATTATGAAGAGTTTGTTAAAG
TCATGATGGCCAAGTGAGAACCTCTCAACTATCACTTAAAAAAAAAATAA
TAAATAAATATCAAAATCAAAAGACTAAAAAATCAAAGTGAAGAGTGCAG
TTGTGACATCCTACATCGATCTAAAGAGGTCTTGGCTTGTTTAATATCCT
GTGAGCTCCTTGACTTGTGGTTGTGTTTAGGGTTGCAAGTCATCAAAT
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