FC923121
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADA_PSEP1 (3-ketoacyl-CoA thiolase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=fadA PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.999e-15 Identity = 66/209 (31.58%), Postives = 95/209 (45.45%), Query Frame = 2 Query: 59 SIKARDVCIVGVARTPMGGFLGSLS-SVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVFSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPVE 676 S+ RDV IV RTPMG G + + A + + I L+R V P V++V +G V G AR A+L IP++ T++++C S M A+ AAQ+I G D+ V GG+E M + H GM MG+ AE+ H ITR++QD + +RS A G F EI P++ Sbjct: 2 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNGKVDPKEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGHVSMMHGVDPNPHLSLHAAKASGM-------------MGLTAEMLGKMHGITREQQDLFGLRSHQLAHKATVEGKFKDEIIPMQ 197
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADA_PSEAE (3-ketoacyl-CoA thiolase OS=Pseudomonas aeruginosa GN=fadA PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.999e-15 Identity = 68/212 (32.08%), Postives = 99/212 (46.70%), Query Frame = 2 Query: 59 SIKARDVCIVGVARTPMGGFLGSLS-SVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVFSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKD---GLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPVE 676 S+ RDV IV RTPMG G + + A + + I L+R V P V++V +G V G AR A+L IP++ T++++C S M A+ AAQ+IQ G D+ V GG+E M GH ++ G+ + L+ MG+ AE+ H I+R+ QD + RS A G F EI P+E Sbjct: 2 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAETMSAHLISKLLERNPKVDPAEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIQTGNGDVFVIGGVEHM----------------GHVGMMHGVDPNPHLSLYAAKASGMMGLTAEMLGKMHGISREAQDKFGARSHQLAWKATQEGKFKDEIIPME 197
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADA_PSEAB (3-ketoacyl-CoA thiolase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=fadA PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.999e-15 Identity = 68/212 (32.08%), Postives = 99/212 (46.70%), Query Frame = 2 Query: 59 SIKARDVCIVGVARTPMGGFLGSLS-SVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVFSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKD---GLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPVE 676 S+ RDV IV RTPMG G + + A + + I L+R V P V++V +G V G AR A+L IP++ T++++C S M A+ AAQ+IQ G D+ V GG+E M GH ++ G+ + L+ MG+ AE+ H I+R+ QD + RS A G F EI P+E Sbjct: 2 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAETMSAHLISKLLERNPKVDPAEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIQTGNGDVFVIGGVEHM----------------GHVGMMHGVDPNPHLSLYAAKASGMMGLTAEMLGKMHGISREAQDKFGARSHQLAWKATQEGKFKDEIIPME 197
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADA_PSEA7 (3-ketoacyl-CoA thiolase OS=Pseudomonas aeruginosa (strain PA7) GN=fadA PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.999e-15 Identity = 68/212 (32.08%), Postives = 99/212 (46.70%), Query Frame = 2 Query: 59 SIKARDVCIVGVARTPMGGFLGSLS-SVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVFSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKD---GLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPVE 676 S+ RDV IV RTPMG G + + A + + I L+R V P V++V +G V G AR A+L IP++ T++++C S M A+ AAQ+IQ G D+ V GG+E M GH ++ G+ + L+ MG+ AE+ H I+R+ QD + RS A G F EI P+E Sbjct: 2 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAETMSAHLISKLLERNPKVDPAEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIQTGNGDVFVIGGVEHM----------------GHVGMMHGVDPNPHLSLYAAKASGMMGLTAEMLGKMHGISREAQDKFGARSHQLAWKATQEGKFKDEIIPME 197
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADA_PSEPU (3-ketoacyl-CoA thiolase OS=Pseudomonas putida GN=fadA PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.611e-15 Identity = 66/209 (31.58%), Postives = 96/209 (45.93%), Query Frame = 2 Query: 59 SIKARDVCIVGVARTPMGGFLGSLS-SVSATKLGSIAIECALKRAN-VKPLLVQEVFFGNVFSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPVE 676 S+ RDV IV RTPMG G + + A + + I L+R + V P V++V +G V G AR A+L IP++ T++++C S M A+ AAQ+I G D+ V GG+E M + H GM MG+ AE+ H ITR++QD + +RS A G F EI P++ Sbjct: 2 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNDKVDPKEVEDVIWGCVNQTLEQGWNIARMASLMTPIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVIGGVEHMGHVSMMHGVDPNPHLSLHAAKASGM-------------MGLTAEMLGKMHGITREQQDLFGVRSHQLAHKATVEGKFKDEIIPMQ 197
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADA_PSEOL (3-ketoacyl-CoA thiolase OS=Pseudomonas oleovorans GN=fadA PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.611e-15 Identity = 66/209 (31.58%), Postives = 96/209 (45.93%), Query Frame = 2 Query: 59 SIKARDVCIVGVARTPMGGFLGSLS-SVSATKLGSIAIECALKRAN-VKPLLVQEVFFGNVFSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPVE 676 S+ RDV IV RTPMG G + + A + + I L+R + V P V++V +G V G AR A+L IP++ T++++C S M A+ AAQ+I G D+ V GG+E M + H GM MG+ AE+ H ITR++QD + +RS A G F EI P++ Sbjct: 2 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNDKVDPKEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGHVSMMHGVDPNPHLSLHAAKASGM-------------MGLTAEMLGKMHGITREQQDLFGLRSHQLAHKATVEGKFKDEIIPMQ 197
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADA_ERWT9 (3-ketoacyl-CoA thiolase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=fadA PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.611e-15 Identity = 69/202 (34.16%), Postives = 98/202 (48.51%), Query Frame = 2 Query: 77 VCIVGVARTPMGGFLG-SLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVFSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPV 673 V IV RTPMG G + V A L + + L R +V P + ++++G V G AR AAL A IP+SV TT+N++C S M+A+ AA++I +G + GG+E M + P + H L + MG+ AE+ A H I+R+ QD +A RS R AA +G FA EI V Sbjct: 4 VVIVDAIRTPMGRSKGGAFRHVRAEDLSAHLMRSLLSRNPSVDPATLDDIYWGCVQQTLEQGFNIARNAALLAEIPHSVPATTVNRLCGSSMQALHDAARAIMVGDARTCLIGGVEHMGHVP-----------MSHGVDFHPGLSRNVAKAAG--MMGLTAEMLARMHGISREMQDRFAARSHQRAAAATQAGHFAAEIVAV 192
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: THIK1_ARATH (3-ketoacyl-CoA thiolase 1, peroxisomal OS=Arabidopsis thaliana GN=KAT1 PE=1 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 3.410e-15 Identity = 64/203 (31.53%), Postives = 98/203 (48.28%), Query Frame = 2 Query: 74 DVCIVGVARTPM-GGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVFSANLGQAP-ARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPVE 676 DV IV RT + GS +L + + +++ NV P V ++ G V +A R AA AG P +V T+N+ CSSG++AV A +I+ G DI + G+ESM+ P+ KGS V+ +K MG+ +E A++ ++R+EQD A+ S + +A SG F EI PV+ Sbjct: 43 DVVIVAAQRTALCKAKRGSFKDTFPDELLASVLRALIEKTNVNPSEVGDIVVGTVLGPGSQRASECRMAAFYAGFPETVPIRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPR----GWKGS-------VNPNVKKFEQAHNCLLPMGITSENVAHRFNVSREEQDQAAVDSHRKAASATASGKFKDEITPVK 234
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADA_SHEFN (3-ketoacyl-CoA thiolase OS=Shewanella frigidimarina (strain NCIMB 400) GN=fadA PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.410e-15 Identity = 65/205 (31.71%), Postives = 95/205 (46.34%), Query Frame = 2 Query: 71 RDVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVFSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPVE 676 + IV RTPMG G +V A L + ++ + R + P +++V +G V G AR A+L AGIP + T+N++C S M A+ AA++I G D + GG+E M + P GM MG+ AE+ H ITR++QD++A+RS R AA G FA EI +E Sbjct: 2 KQAVIVDCIRTPMGRSKAGVFRNVRAETLSAELMKALMVRNPQLDPNDIEDVIWGCVQQTLEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMDALHQAARAIMTGQGDTFIIGGVEHMGHVPMNHGVDFHPGLANRVAKASGM-------------MGLTAEMLGKMHGITREQQDAFAVRSHQRAHAATIEGRFAKEIWGIE 193
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADA_PSEHT (3-ketoacyl-CoA thiolase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=fadA PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.410e-15 Identity = 67/201 (33.33%), Postives = 96/201 (47.76%), Query Frame = 2 Query: 83 IVGVARTPMGGFLGSL-SSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVFSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPVE 676 IV RTPMG G + + A L + ++ L R V P + ++++G V G AR AAL AGIP+SV T+N++C S M+A+ AA++I G D + GG+E M + P + H L + MG+ AE A H I+R++QD +A RS R AA G F EI +E Sbjct: 6 IVDCIRTPMGRSKGGVFKNKRAEDLSAHLMKGLLDRNPAVDPASIDDIYWGCVQQTLEQGFNVARNAALLAGIPHSVPAVTVNRLCGSSMQALHDAARAIMTGAGDTYLIGGVEHMGHVP-----------MTHGNDFHPGLATSIAQAAG--SMGLTAEYLATLHGISREQQDEFAYRSHQRAQAATVEGRFRREILAME 193 The following BLAST results are available for this feature:
BLAST of FC923121 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 218
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923121 ID=FC923121; Name=FC923121; organism=Citrus clementina; type=EST; length=716bpback to top |