FC923121
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADA_YERP3 (3-ketoacyl-CoA thiolase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=fadA PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.192e-13 Identity = 64/200 (32.00%), Postives = 95/200 (47.50%), Query Frame = 2 Query: 74 DVCIVGVARTPMGGFLG-SLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVFSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEI 664 +V I+ RTPMG G + V A L + + + R + + ++++G V G AR A+L A IP+SV T+N++C S M+A+ A++I +G I + GG+E M + P + H VD G MG+ AE+ A H I+R QD +A RS R AA +G FA EI Sbjct: 3 NVVIIDAVRTPMGRSKGGAFRHVRAEDLSAHLMRAVISRNPGLNAAEIDDIYWGCVQQTLEQGFNIARNASLLAEIPHSVPAVTVNRLCGSSMQALHDGARAIMVGDAKISLIGGVEHMGHVP-----------MNHG--VDFHPGMGRTVAKAAGMMGLTAEMLAKIHNISRQSQDEFAFRSHQRAYAATQAGHFAKEI 189
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADA_SHISS (3-ketoacyl-CoA thiolase OS=Shigella sonnei (strain Ss046) GN=fadA PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.192e-13 Identity = 65/201 (32.34%), Postives = 95/201 (47.26%), Query Frame = 2 Query: 77 VCIVGVARTPMGGFLG-SLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVFSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAP 670 V IV RTPMG G + +V A L + + L R ++ + ++++G V G AR AAL A +P+SV T+N++C S M+A+ AA+ I G + GG+E M + P + H L + MG+ AE+ A H I+R+ QD++A RS R AA SG F EI P Sbjct: 4 VVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPALEAAALDDIYWGCVQQTLEQGFNIARNAALLAEVPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQAGLVGGVEHMGHVP-----------MSHGVDFHPGLSRNVAKAAG--MMGLTAEMLARMHGISREMQDAFAARSHARAWAATQSGAFKNEIIP 191
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADA_COLP3 (3-ketoacyl-CoA thiolase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=fadA PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.192e-13 Identity = 62/204 (30.39%), Postives = 98/204 (48.04%), Query Frame = 2 Query: 74 DVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVFSAN-LGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPVE 676 +V IV RTPMG G +V A L + ++ L R + P +++V +G V G AR A+L AG+P S+ T+N++C S M+A+ A+ SI G D+ + GG+E M + P + +D D L + MG+ AE+ +H ITR+ QD++ RS + A +G + EI + Sbjct: 3 EVVIVDCIRTPMGRSKAGVFRNVRAEALSAHLMKQILVRNPALNPEDIEDVIWGCVKQTKEQGFNIARNASLLAGLPKSIGGVTVNRLCGSSMEALHQASTSIMSGQGDVFLIGGVEHMGHVP-----------MMYDVDFDPALNKNI--ALASGNMGLTAELLGKQHGITREMQDAFGARSHQKAHEAHLAGRWDNEIVATQ 193
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADA_SALCH (3-ketoacyl-CoA thiolase OS=Salmonella choleraesuis GN=fadA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.168e-13 Identity = 64/201 (31.84%), Postives = 94/201 (46.77%), Query Frame = 2 Query: 77 VCIVGVARTPMGGFLG-SLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVFSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAP 670 V IV RTPMG G + + A L + + L R ++ + ++++G V G AR AAL A IP+SV T+N++C S M+A+ AA+ I G + + GG+E M + P + H L + MG+ AE+ + H I+R+ QD +A RS R AA SG F EI P Sbjct: 4 VVIVDAIRTPMGRSKGGAFRNERAEDLSAHLMRSLLARNPSLTAATLDDIYWGCVQQTLEQGFNIARNAALLAEIPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQVCLVGGVEHMGHVP-----------MSHGVDFHPGLSRNVAKAAG--MMGLTAEMLSRLHGISREMQDQFAARSHARAWAATQSGAFKTEIIP 191
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADI_SERP5 (3-ketoacyl-CoA thiolase OS=Serratia proteamaculans (strain 568) GN=fadI PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.444e-13 Identity = 58/212 (27.36%), Postives = 88/212 (41.51%), Query Frame = 2 Query: 77 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVFSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP--------KYLAEARKGSRLGHDTIVDGMLK--------DGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEI 664 + IV RTP + + A LG A+ L R + P L++++ FG V AR+ LG G+ ++++ C++ +A+ A+SI G I +AGG +S S P + L + K L + LK + + MG AE A H ITR+EQD+ A RS A GL E+ Sbjct: 15 IAIVNGLRTPFAKQATAYHGIPAVDLGKTAVSELLARTGIDPALIEQLVFGQVVQMPEAPNIAREIVLGTGMSVHTDAYSVSRACATSFQAIANVAESIMAGSISIGIAGGADSSSVLPIGVSKALARTLVDVNKARTLSQRLKLFSRLKFRDLMPVPPAVAEYSTGLRMGDTAEQMAKSHGITREEQDALAHRSHQLAAKAWEQGLLHDEV 226
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADA_ECOUT (3-ketoacyl-CoA thiolase OS=Escherichia coli (strain UTI89 / UPEC) GN=fadA PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.444e-13 Identity = 64/201 (31.84%), Postives = 94/201 (46.77%), Query Frame = 2 Query: 77 VCIVGVARTPMGGFLG-SLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVFSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAP 670 V IV RTPMG G + +V A L + + L R ++ + ++++G V G AR AAL A +P+SV T+N++C S M+A+ AA+ I G + GG+E M + P + H L + MG+ E+ A H I+R+ QD++A RS R AA SG F EI P Sbjct: 4 VVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPALEAAALDDIYWGCVQQTLEQGFNIARNAALLAEVPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQACLVGGVEHMGHVP-----------MSHGVDFHPGLSRNVAKAAG--MMGLTTEMLARMHGISREMQDAFAARSHARAWAATQSGAFKNEIIP 191
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADA_PSYCK (3-ketoacyl-CoA thiolase OS=Psychrobacter cryohalolentis (strain K5) GN=fadA PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.110e-13 Identity = 59/207 (28.50%), Postives = 89/207 (43.00%), Query Frame = 2 Query: 62 IKARDVCIVGVARTPMGGFL-GSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVFSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPVE 676 + +DV IV R+ MG G V A + + + ++R + P V+++ +G V G R L AGIP + TIN++C S M+A+ AA I G D+ + GG+E M + H M MG+ AE+ + ITR+EQD++ + S R AA G F EI +E Sbjct: 4 LSPKDVVIVDGVRSAMGKTKNGMFRHVRADSMSAELVRALVERNDFDPRDVEDIIWGCVNQTLEQGLNIGRNIGLLAGIPKTAGGQTINRLCGSSMQALHTAAAQIMTGQGDVFIIGGVEHMGHVGMMHGVDLNPEASKHYAKASNM-------------MGLTAEMLGRMNNITREEQDAFGLESHRRAWAATTEGRFDNEIIGIE 197
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADI_VIBF1 (3-ketoacyl-CoA thiolase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=fadI PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.286e-13 Identity = 59/222 (26.58%), Postives = 95/222 (42.79%), Query Frame = 2 Query: 47 EPSESIKARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVFSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP----KYLAEA-----------RKGSRLGHDTIVD-GMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEI 664 +P + + + +V RTP + S+ A LG +A++ + + ++ P L+ +V FG V AR+ LG G+ ++ + C++ + +SI G DI +AGG +S S P K LA +K S L ++ D + + + MG AE A H ITR+EQD+ A RS A GL E+ Sbjct: 11 QPLTTRQGDRIAVVSGIRTPFAKQSTAFSTTPAVDLGKLAVKALMDKTDIDPKLIDQVVFGQVVQMPEAPNIAREIVLGTGMNIGTDAYSVTRACATSFQTTANVVESIMAGTIDIGIAGGADSSSVLPIGVSKKLASTLLALSKTKTVYQKLSLLRTLSLKDIAPVPPAVAEYSTGISMGQTAEQMAKSHGITREEQDALAHRSHTLAAKAWKDGLIQDEV 232
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADA_SHIDS (3-ketoacyl-CoA thiolase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=fadA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.286e-13 Identity = 64/201 (31.84%), Postives = 94/201 (46.77%), Query Frame = 2 Query: 77 VCIVGVARTPMGGFLG-SLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVFSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAP 670 V IV RTPMG G + +V A L + + L R ++ + ++++G V G AR AAL A +P+SV T+N++C S M+A+ AA+ I G + GG+E M + P + H L + MG+ AE+ A H I+R+ QD++A RS R AA S F EI P Sbjct: 4 VVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPALEAAALDDIYWGCVQQTLEQGFNIARNAALLAEVPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQACLVGGVEHMGHVP-----------MSHGVDFHPGLSRNVAKAAG--MMGLTAEMLARMHGISREMQDAFAARSHARAWAATQSAAFKNEIIP 191
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADA_ECOLI (3-ketoacyl-CoA thiolase OS=Escherichia coli (strain K12) GN=fadA PE=1 SV=3) HSP 1 Score: 73.9442 bits (180), Expect = 9.286e-13 Identity = 64/201 (31.84%), Postives = 94/201 (46.77%), Query Frame = 2 Query: 77 VCIVGVARTPMGGFLG-SLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVFSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAP 670 V IV RTPMG G + +V A L + + L R ++ + ++++G V G AR AAL A +P+SV T+N++C S M+A+ AA+ I G + GG+E M + P + H L + MG+ AE+ A H I+R+ QD++A RS R AA S F EI P Sbjct: 4 VVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPALEAAALDDIYWGCVQQTLEQGFNIARNAALLAEVPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQACLVGGVEHMGHVP-----------MSHGVDFHPGLSRNVAKAAG--MMGLTAEMLARMHGISREMQDAFAARSHARAWAATQSAAFKNEIIP 191 The following BLAST results are available for this feature:
BLAST of FC923121 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 218
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923121 ID=FC923121; Name=FC923121; organism=Citrus clementina; type=EST; length=716bpback to top |