FC923121
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADA_ECOHS (3-ketoacyl-CoA thiolase OS=Escherichia coli O9:H4 (strain HS) GN=fadA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.286e-13 Identity = 64/201 (31.84%), Postives = 94/201 (46.77%), Query Frame = 2 Query: 77 VCIVGVARTPMGGFLG-SLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVFSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAP 670 V IV RTPMG G + +V A L + + L R ++ + ++++G V G AR AAL A +P+SV T+N++C S M+A+ AA+ I G + GG+E M + P + H L + MG+ AE+ A H I+R+ QD++A RS R AA S F EI P Sbjct: 4 VVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPALEAAALDDIYWGCVQQTLEQGFNIARNAALLAEVPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQACLVGGVEHMGHVP-----------MSHGVDFHPGLSRNVAKAAG--MMGLTAEMLARMHGISREMQDAFAARSHARAWAATQSAAFKNEIIP 191
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADA_YERE8 (3-ketoacyl-CoA thiolase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=fadA PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.213e-12 Identity = 63/200 (31.50%), Postives = 95/200 (47.50%), Query Frame = 2 Query: 74 DVCIVGVARTPMGGFLG-SLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVFSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEI 664 +V I+ RTPMG G + V A L + + L R + + ++++G V G AR A+L A IP+SV T+N++C S M+A+ A++I +G + + GG+E M + P + H VD G MG+ AE+ A H I+R QD +A+RS R AA + FA EI Sbjct: 3 NVVIIDAVRTPMGRSKGGAFRQVRAEDLSAHLMREVLSRNPELNAAEIDDIYWGCVQQTLEQGFNIARNASLLAEIPHSVPAVTVNRLCGSSMQALHDGARAIMVGDAQVSLIGGVEHMGHVP-----------MNHG--VDFHPGMGRTVAKAAGMMGLTAEMLAKIHNISRQSQDEFAVRSHQRAYAATQADHFAKEI 189
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADA_PSYA2 (3-ketoacyl-CoA thiolase OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=fadA PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.213e-12 Identity = 58/207 (28.02%), Postives = 89/207 (43.00%), Query Frame = 2 Query: 62 IKARDVCIVGVARTPMGGFL-GSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVFSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPVE 676 + +DV IV R+ MG G V A + + + ++R + P V+++ +G V G R L AGIP + T+N++C S M+A+ AA I G D+ + GG+E M + H M MG+ AE+ + ITR+EQD++ + S R AA G F EI +E Sbjct: 4 LSPKDVVIVDGVRSAMGKTKNGMFRHVRADSMSAELVRALVERNDFDPRDVEDIIWGCVNQTLEQGLNIGRNIGLLAGIPKTAGGQTVNRLCGSSMQALHTAAAQIMTGQGDVFIIGGVEHMGHVGMMHGIDLNPEASKHYAKASNM-------------MGLTAEMLGRMNNITREEQDAFGLESHRRAWAATTEGRFDNEIIGIE 197
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADA_ECO24 (3-ketoacyl-CoA thiolase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=fadA PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.213e-12 Identity = 64/201 (31.84%), Postives = 94/201 (46.77%), Query Frame = 2 Query: 77 VCIVGVARTPMGGFLG-SLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVFSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAP 670 V IV RTPM G + +V A L + + L R ++ + ++++G V G AR AAL A +P+SV T+N++C S M+A+ AA+ I G + GG+E M + P + H L + MG+ AE+ A H I+R+ QD++A RS R AA SG F EI P Sbjct: 4 VVIVDAIRTPMSRSKGGAFRNVRAEDLSAHLMRSLLARNPALEAAALDDIYWGCVQQTLEQGFNIARNAALLAEVPHSVPAVTVNRLCGSSMQALHDAARMIMSGDAQACLVGGVEHMGHVP-----------MSHGVDFHPGLSRNVAKAAG--MMGLTAEMLARMHGISREMQDAFAARSHARAWAATQSGAFKNEIIP 191
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADI_AERHH (3-ketoacyl-CoA thiolase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=fadI PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.584e-12 Identity = 60/234 (25.64%), Postives = 96/234 (41.03%), Query Frame = 2 Query: 77 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVFSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP--------KYLAEARKGSRLGHDTIVDGMLK--------DGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEI---------APVEMSSGRRKPS 703 + +V RTP + V A LG + + L R ++ P L+ ++ FG V AR+ LG G+ S ++++ C++ +AV +SI G DI +AGG +S S P + L + K L + L+ + + MG AE A H I+R+ QD+ A RS A G + E+ AP+E + R+ S Sbjct: 15 IAVVAGLRTPFAKQATAFHGVPAVDLGKLVVSEMLARTDLDPKLIDQLVFGQVVQMPEAPNIAREIVLGTGMSVSTDAYSVSRACATSFQAVANVTESIMAGTVDIAIAGGADSSSVLPIGVSKKLARALVDLNKARNLQQRFNILRQLRVKDLLPVPPAVAEYSTGLSMGQTAEQMAKSHQISREAQDALAHRSHTLAAQAWADGKLSGEVFTAHVPPYKAPLERDNNIRESS 248
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADA_ACIBT (3-ketoacyl-CoA thiolase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=fadA PE=3 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.584e-12 Identity = 60/208 (28.85%), Postives = 88/208 (42.31%), Query Frame = 2 Query: 59 SIKARDVCIVGVARTPMGGFL-GSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVFSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPVE 676 ++ RDV IV R+ MG G +V A L + + + R V+++ +G V G R L AG+P +V T+N++C S M+A+ AA I DI + GG+E M + H M MG+ AE+ + ITR+EQD++ + S R AA G F EI VE Sbjct: 3 TLNPRDVVIVDGVRSAMGKSKNGMFRNVRADSLSAELVRALIARNQFDVNEVEDLIWGCVNQTLEQGMNIGRNIGLLAGLPKTVAGQTVNRLCGSSMQAIHTAAAQIATNQGDIFIIGGVEHMGHVGMMHGIDLNPEASKHYAKASNM-------------MGLTAEMLGRMNGITREEQDTFGVESHRRAWAATQEGRFKNEIIGVE 197
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADI_PHOPR (3-ketoacyl-CoA thiolase OS=Photobacterium profundum GN=fadI PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.069e-12 Identity = 61/226 (26.99%), Postives = 97/226 (42.92%), Query Frame = 2 Query: 35 MVPLEPSESIKARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVFSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP-----------KYLAEARKGSR----LGHDTIVDGM-LKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEI 664 M L+ + + + +V RTP + + V A +G + + L+ + P L+++V FG V AR+ LG G+ ++ + C++ +A A+SI G DI +AGG +S S P L++AR S+ L ++ D M + + + MG AE A H ITR EQD+ A RS A GL E+ Sbjct: 1 MTRLQNLTTRQGERIAVVSGLRTPFARQATAFNGVPALDMGKMVVNEMLQELDFDPKLIEQVVFGQVVQMPEAPNIAREIVLGTGMHIGTDAYSVTRACATSFQAAANVAESIISGTIDIGIAGGADSSSVLPIGVSKKLAATLLALSKARTMSKRLKLLSTLSVKDLMPVPPAVAEYSTGISMGQTAEQMAKSHGITRQEQDALAYRSHTLAAKAWKDGLIRGEV 226
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADA_ACIBY (3-ketoacyl-CoA thiolase OS=Acinetobacter baumannii (strain AYE) GN=fadA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.069e-12 Identity = 60/208 (28.85%), Postives = 88/208 (42.31%), Query Frame = 2 Query: 59 SIKARDVCIVGVARTPMGGFL-GSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVFSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPVE 676 ++ RDV IV R+ MG G +V A L + + + R V+++ +G V G R L AG+P +V T+N++C S M+A+ AA I DI + GG+E M + H M MG+ AE+ + ITR+EQD++ + S R AA G F EI VE Sbjct: 3 TLNPRDVVIVDGVRSAMGKSKNGMFRNVRADSLSAELVRALVARNQFDVNEVEDLIWGCVNQTLEQGMNIGRNIGLLAGLPKTVAGQTVNRLCGSSMQAIHTAAAQIATNQGDIFIIGGVEHMGHVGMMHGIDLNPEASKHYAKASNM-------------MGLTAEMLGRMNGITREEQDAFGVESHRRAWAATQEGRFKNEIIGVE 197
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADA_ACIBS (3-ketoacyl-CoA thiolase OS=Acinetobacter baumannii (strain SDF) GN=fadA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.069e-12 Identity = 60/208 (28.85%), Postives = 88/208 (42.31%), Query Frame = 2 Query: 59 SIKARDVCIVGVARTPMGGFL-GSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVFSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPVE 676 ++ RDV IV R+ MG G +V A L + + + R V+++ +G V G R L AG+P +V T+N++C S M+A+ AA I DI + GG+E M + H M MG+ AE+ + ITR+EQD++ + S R AA G F EI VE Sbjct: 3 TLNPRDVVIVDGVRSAMGKSKNGMFRNVRADSLSAELVRALVARNQFDVNEVEDLIWGCVNQTLEQGMNIGRNIGLLAGLPKTVAGQTVNRLCGSSMQAIHTAAAQIATNQGDIFIIGGVEHMGHVGMMHGIDLNPEASKHYAKASNM-------------MGLTAEMLGRMNGITREEQDAFGVESHRRAWAATQEGRFKNEIIGVE 197
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADA_ACIBC (3-ketoacyl-CoA thiolase OS=Acinetobacter baumannii (strain ACICU) GN=fadA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.069e-12 Identity = 60/208 (28.85%), Postives = 88/208 (42.31%), Query Frame = 2 Query: 59 SIKARDVCIVGVARTPMGGFL-GSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVFSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPVE 676 ++ RDV IV R+ MG G +V A L + + + R V+++ +G V G R L AG+P +V T+N++C S M+A+ AA I DI + GG+E M + H M MG+ AE+ + ITR+EQD++ + S R AA G F EI VE Sbjct: 3 TLNPRDVVIVDGVRSAMGKSKNGMFRNVRADSLSAELVRALVARNQFDVNEVEDLIWGCVNQTLEQGMNIGRNIGLLAGLPKTVAGQTVNRLCGSSMQAIHTAAAQIATNQGDIFIIGGVEHMGHVGMMHGIDLNPEASKHYAKASNM-------------MGLTAEMLGRMNGITREEQDAFGVESHRRAWAATQEGRFKNEIIGVE 197 The following BLAST results are available for this feature:
BLAST of FC923121 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 218
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923121 ID=FC923121; Name=FC923121; organism=Citrus clementina; type=EST; length=716bpback to top |