FC923121
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADI_YERPP (3-ketoacyl-CoA thiolase OS=Yersinia pestis (strain Pestoides F) GN=fadI PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.287e-11 Identity = 53/195 (27.18%), Postives = 85/195 (43.59%), Query Frame = 2 Query: 77 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVFSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP--------KYLAEARKGSRLGHDTIVDGMLK--------DGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 613 + IV RTP + V A LG I + L R+ + L+ ++ FG V AR+ LG G+ ++++ C++ +AV A+SI G DI +AGG +S S P + L +A K L + L+ + + MG AE A + I+R++QD+ A+RS Sbjct: 15 IVIVNGLRTPFAKQATAYHGVPAVDLGKIVVSELLARSGISSELIDQLVFGQVVQMPEAPNIAREIVLGTGMSVHTDAYSVSRACATSFQAVANVAESIIAGSVDIAIAGGADSSSVLPIGVSKALARTLVDANKARSLSQKLKLFSRLRLRDLLPVAPAVAEYSTGLRMGDTAEQMAKTYGISREDQDALALRS 209
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADI_YERPN (3-ketoacyl-CoA thiolase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=fadI PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.287e-11 Identity = 53/195 (27.18%), Postives = 85/195 (43.59%), Query Frame = 2 Query: 77 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVFSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP--------KYLAEARKGSRLGHDTIVDGMLK--------DGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 613 + IV RTP + V A LG I + L R+ + L+ ++ FG V AR+ LG G+ ++++ C++ +AV A+SI G DI +AGG +S S P + L +A K L + L+ + + MG AE A + I+R++QD+ A+RS Sbjct: 15 IVIVNGLRTPFAKQATAYHGVPAVDLGKIVVSELLARSGISSELIDQLVFGQVVQMPEAPNIAREIVLGTGMSVHTDAYSVSRACATSFQAVANVAESIIAGSVDIAIAGGADSSSVLPIGVSKALARTLVDANKARSLSQKLKLFSRLRLRDLLPVAPAVAEYSTGLRMGDTAEQMAKTYGISREDQDALALRS 209
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADI_YERPG (3-ketoacyl-CoA thiolase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=fadI PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.287e-11 Identity = 53/195 (27.18%), Postives = 85/195 (43.59%), Query Frame = 2 Query: 77 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVFSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP--------KYLAEARKGSRLGHDTIVDGMLK--------DGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 613 + IV RTP + V A LG I + L R+ + L+ ++ FG V AR+ LG G+ ++++ C++ +AV A+SI G DI +AGG +S S P + L +A K L + L+ + + MG AE A + I+R++QD+ A+RS Sbjct: 15 IVIVNGLRTPFAKQATAYHGVPAVDLGKIVVSELLARSGISSELIDQLVFGQVVQMPEAPNIAREIVLGTGMSVHTDAYSVSRACATSFQAVANVAESIIAGSVDIAIAGGADSSSVLPIGVSKALARTLVDANKARSLSQKLKLFSRLRLRDLLPVAPAVAEYSTGLRMGDTAEQMAKTYGISREDQDALALRS 209
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADI_YERPE (3-ketoacyl-CoA thiolase OS=Yersinia pestis GN=fadI PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.287e-11 Identity = 53/195 (27.18%), Postives = 85/195 (43.59%), Query Frame = 2 Query: 77 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVFSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP--------KYLAEARKGSRLGHDTIVDGMLK--------DGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 613 + IV RTP + V A LG I + L R+ + L+ ++ FG V AR+ LG G+ ++++ C++ +AV A+SI G DI +AGG +S S P + L +A K L + L+ + + MG AE A + I+R++QD+ A+RS Sbjct: 15 IVIVNGLRTPFAKQATAYHGVPAVDLGKIVVSELLARSGISSELIDQLVFGQVVQMPEAPNIAREIVLGTGMSVHTDAYSVSRACATSFQAVANVAESIIAGSVDIAIAGGADSSSVLPIGVSKALARTLVDANKARSLSQKLKLFSRLRLRDLLPVAPAVAEYSTGLRMGDTAEQMAKTYGISREDQDALALRS 209
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADI_YERPB (3-ketoacyl-CoA thiolase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=fadI PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.287e-11 Identity = 53/195 (27.18%), Postives = 85/195 (43.59%), Query Frame = 2 Query: 77 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVFSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP--------KYLAEARKGSRLGHDTIVDGMLK--------DGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 613 + IV RTP + V A LG I + L R+ + L+ ++ FG V AR+ LG G+ ++++ C++ +AV A+SI G DI +AGG +S S P + L +A K L + L+ + + MG AE A + I+R++QD+ A+RS Sbjct: 15 IVIVNGLRTPFAKQATAYHGVPAVDLGKIVVSELLARSGISSELIDQLVFGQVVQMPEAPNIAREIVLGTGMSVHTDAYSVSRACATSFQAVANVAESIIAGSVDIAIAGGADSSSVLPIGVSKALARTLVDANKARSLSQKLKLFSRLRLRDLLPVAPAVAEYSTGLRMGDTAEQMAKTYGISREDQDALALRS 209
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADI_YERPA (3-ketoacyl-CoA thiolase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=fadI PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.287e-11 Identity = 53/195 (27.18%), Postives = 85/195 (43.59%), Query Frame = 2 Query: 77 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVFSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP--------KYLAEARKGSRLGHDTIVDGMLK--------DGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 613 + IV RTP + V A LG I + L R+ + L+ ++ FG V AR+ LG G+ ++++ C++ +AV A+SI G DI +AGG +S S P + L +A K L + L+ + + MG AE A + I+R++QD+ A+RS Sbjct: 15 IVIVNGLRTPFAKQATAYHGVPAVDLGKIVVSELLARSGISSELIDQLVFGQVVQMPEAPNIAREIVLGTGMSVHTDAYSVSRACATSFQAVANVAESIIAGSVDIAIAGGADSSSVLPIGVSKALARTLVDANKARSLSQKLKLFSRLRLRDLLPVAPAVAEYSTGLRMGDTAEQMAKTYGISREDQDALALRS 209
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADI_YERP3 (3-ketoacyl-CoA thiolase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=fadI PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.287e-11 Identity = 53/195 (27.18%), Postives = 85/195 (43.59%), Query Frame = 2 Query: 77 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVFSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP--------KYLAEARKGSRLGHDTIVDGMLK--------DGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 613 + IV RTP + V A LG I + L R+ + L+ ++ FG V AR+ LG G+ ++++ C++ +AV A+SI G DI +AGG +S S P + L +A K L + L+ + + MG AE A + I+R++QD+ A+RS Sbjct: 15 IVIVNGLRTPFAKQATAYHGVPAVDLGKIVVSELLARSGISSELIDQLVFGQVVQMPEAPNIAREIVLGTGMSVHTDAYSVSRACATSFQAVANVAESIIAGSVDIAIAGGADSSSVLPIGVSKALARTLVDANKARSLSQKLKLFSRLRLRDLLPVAPAVAEYSTGLRMGDTAEQMAKTYGISREDQDALALRS 209
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADI_VIBCH (3-ketoacyl-CoA thiolase OS=Vibrio cholerae GN=fadI PE=3 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.287e-11 Identity = 56/195 (28.72%), Postives = 87/195 (44.62%), Query Frame = 2 Query: 77 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVFSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP----KYLAEA-----------RKGSRLGHDTIVDGM-LKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 613 V IV RTP V A LG + ++ + R + P L+++V FG V AR+ LG G+ + ++ + C++ +A + A+SI G DI +AGG +S S P K LA + +K L + + D M + + + MG AE A + I+R EQD+ A RS Sbjct: 14 VAIVAGLRTPFARQSTEFGQVPAVDLGKMVVQEMMARTAIDPKLIEQVVFGQVVQMPEAPNIAREIVLGTGMSINTDAYSVTRACATSFQAAVNVAESIMAGSIDIGIAGGADSSSVLPIGVSKKLAASLLALSKTKTVGQKLKLLSNLSFKDLMPVPPAVAEYSTGLSMGQTAEQMAKSYAISRAEQDALAHRS 208
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADI_VIBC3 (3-ketoacyl-CoA thiolase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=fadI PE=3 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.287e-11 Identity = 56/195 (28.72%), Postives = 87/195 (44.62%), Query Frame = 2 Query: 77 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVFSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP----KYLAEA-----------RKGSRLGHDTIVDGM-LKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 613 V IV RTP V A LG + ++ + R + P L+++V FG V AR+ LG G+ + ++ + C++ +A + A+SI G DI +AGG +S S P K LA + +K L + + D M + + + MG AE A + I+R EQD+ A RS Sbjct: 14 VAIVAGLRTPFARQSTEFGQVPAVDLGKMVVQEMMARTAIDPKLIEQVVFGQVVQMPEAPNIAREIVLGTGMSINTDAYSVTRACATSFQAAVNVAESIMAGSIDIGIAGGADSSSVLPIGVSKKLAASLLALSKTKTVGQKLKLLSNLSFKDLMPVPPAVAEYSTGLSMGQTAEQMAKSYAISRAEQDALAHRS 208
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADI_SHESW (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain W3-18-1) GN=fadI PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.287e-11 Identity = 57/201 (28.36%), Postives = 88/201 (43.78%), Query Frame = 2 Query: 65 KARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVFSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP----KYLAEA----RKGSRLGHDTIVDGMLKDGLWDVY----------NDFGMGVCAEICANKHTITRDEQDSYAIRS 613 K + IV RTP + VSA +G + + L R+ + P L++++ +G V AR+ LG G+ S ++ + C++ ++ + A+SI G DI +AGG +S S P K LA A K G + L GL D+ MG AE A + I+R +QD+ A RS Sbjct: 11 KGERIAIVAGLRTPFAKQATAFHGVSALDMGKMVVNELLARSELDPKLIEQLVYGQVVQMPAAPNIAREIVLGTGMNVSTDAYSVTRACATSFQSTVNVAESIMTGNIDIGIAGGADSSSVLPIGVSKKLAHALVDLNKARSFGQKLQIFRRL--GLKDLLPVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALAHRS 209 The following BLAST results are available for this feature:
BLAST of FC923121 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 218
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923121 ID=FC923121; Name=FC923121; organism=Citrus clementina; type=EST; length=716bpback to top |