FC923121
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADA_ACIAD (3-ketoacyl-CoA thiolase OS=Acinetobacter sp. (strain ADP1) GN=fadA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.655e-11 Identity = 58/208 (27.88%), Postives = 86/208 (41.35%), Query Frame = 2 Query: 59 SIKARDVCIVGVARTPMGGFL-GSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVFSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPVE 676 ++ RDV IV R+ MG G +V A L + + + R V+++ +G V G R L A +P +V T+N++C S M+A+ AA I DI + GG+E M + H M MG+ AE+ + I R+EQD++ + S R AA G F EI VE Sbjct: 3 NLNPRDVVIVDGVRSAMGKSKNGMFRNVRADSLSAELVRALVARNQFDVNEVEDLIWGCVNQTLEQGMNIGRNIVLLADLPKTVAGQTVNRLCGSSMQAIHTAAAQIATNQGDIFIIGGVEHMGHVGMMHGIDLNPEASKHYAKASNM-------------MGLTAEMLGRMNGIGREEQDAFGVESHRRAWAATQEGRFKNEIVGVE 197
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: ECHB_MACFA (Trifunctional enzyme subunit beta, mitochondrial OS=Macaca fascicularis GN=HADHB PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.655e-11 Identity = 58/211 (27.49%), Postives = 87/211 (41.23%), Query Frame = 2 Query: 71 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVFSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP--------KYLAEARKGSRLGHDTIVDGMLK--------DGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFA 655 R+V +V RTP S + L A+ L R +V +V + FG V AR+AALGAG + T+ C S +A+ I G D++VAGG+E MS+ P K + + K +G + + + + MG A+ A ++R EQD YA+RS AQ+ GL + Sbjct: 53 RNVVVVDGVRTPFLLSGTSYKDLMPHDLARAALTGLLHRTSVPKEVVDYIIFGTVIQEVKTSNVAREAALGAGFSDKTPAHTVTMACISANQAMTTGVGLIASGQCDVIVAGGVELMSDIPIRHSRKMRKLMLDLNKAKSMGQRLSLISKFRLNFLAPELPAVAEFSTSETMGHSADRLAAAFAVSRLEQDEYALRSHSLAKKAQDEGLLS 263
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADI_SHEFN (3-ketoacyl-CoA thiolase OS=Shewanella frigidimarina (strain NCIMB 400) GN=fadI PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.691e-11 Identity = 55/208 (26.44%), Postives = 90/208 (43.27%), Query Frame = 2 Query: 77 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVFSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP----KYLAEA--------------RKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSG 646 + IV RTP + VSA +G + + L R+ + P L++++ +G V AR+ LG G+ S ++ + C++ ++ + A+SI G +I +AGG +S S P K LA A RLG ++ + + + MG AE A + I+R +QD+ A RS NSG Sbjct: 15 IAIVAGLRTPFAKQATAFHGVSALDMGKMVVNELLSRSEIDPQLIEQLVYGQVVQMPAAPNIAREIVLGTGMNVSTDAYSVTRACATSFQSAVNVAESIMTGNIEIGLAGGSDSSSVLPIGVSKKLAHALVDLNKARTFKQKFAIARRLGLKDLMP--VPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALAHRSHTLATETWNSG 220
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADI_SHEB9 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS195) GN=fadI PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.691e-11 Identity = 55/199 (27.64%), Postives = 88/199 (44.22%), Query Frame = 2 Query: 65 KARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVFSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP----KYLAEA----RKGSRLGHDTIVDGML--KD------GLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 613 K + IV RTP + VSA +G + + L R+ + P L++++ +G V AR+ LG G+ S ++ + C++ ++ + A+SI G +I +AGG +S S P K LA A K G + L KD + + MG AE A + I+R +QD+ A RS Sbjct: 11 KGERIAIVAGLRTPFAKQATAFHGVSALDMGKMVVNELLARSELDPKLIEQLVYGQVVQMPAAPNIAREIVLGTGMNVSTDAYSVTRACATSFQSAVNVAESIMTGNIEIGIAGGADSSSVLPIGVSKKLAHALVDLNKARSFGQKLQIFRRLGIKDLLPVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALAHRS 209
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADI_SHEB8 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS185) GN=fadI PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.691e-11 Identity = 55/199 (27.64%), Postives = 88/199 (44.22%), Query Frame = 2 Query: 65 KARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVFSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP----KYLAEA----RKGSRLGHDTIVDGML--KD------GLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 613 K + IV RTP + VSA +G + + L R+ + P L++++ +G V AR+ LG G+ S ++ + C++ ++ + A+SI G +I +AGG +S S P K LA A K G + L KD + + MG AE A + I+R +QD+ A RS Sbjct: 11 KGERIAIVAGLRTPFAKQATAFHGVSALDMGKMVVNELLARSELDPKLIEQLVYGQVVQMPAAPNIAREIVLGTGMNVSTDAYSVTRACATSFQSAVNVAESIMTGNIEIGIAGGADSSSVLPIGVSKKLAHALVDLNKARSFGQKLQIFRRLGIKDLLPVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALAHRS 209
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADI_SHEB5 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=fadI PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.691e-11 Identity = 55/199 (27.64%), Postives = 88/199 (44.22%), Query Frame = 2 Query: 65 KARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVFSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP----KYLAEA----RKGSRLGHDTIVDGML--KD------GLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 613 K + IV RTP + VSA +G + + L R+ + P L++++ +G V AR+ LG G+ S ++ + C++ ++ + A+SI G +I +AGG +S S P K LA A K G + L KD + + MG AE A + I+R +QD+ A RS Sbjct: 11 KGERIAIVAGLRTPFAKQATAFHGVSALDMGKMVVNELLARSELDPKLIEQLVYGQVVQMPAAPNIAREIVLGTGMNVSTDAYSVTRACATSFQSAVNVAESIMTGNIEIGIAGGADSSSVLPIGVSKKLAHALVDLNKARSFGQKLQIFRRLGIKDLLPVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALAHRS 209
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADI_SHEB2 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS223) GN=fadI PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.691e-11 Identity = 55/199 (27.64%), Postives = 88/199 (44.22%), Query Frame = 2 Query: 65 KARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVFSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP----KYLAEA----RKGSRLGHDTIVDGML--KD------GLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 613 K + IV RTP + VSA +G + + L R+ + P L++++ +G V AR+ LG G+ S ++ + C++ ++ + A+SI G +I +AGG +S S P K LA A K G + L KD + + MG AE A + I+R +QD+ A RS Sbjct: 11 KGERIAIVAGLRTPFAKQATAFHGVSALDMGKMVVNELLARSELDPKLIEQLVYGQVVQMPAAPNIAREIVLGTGMNVSTDAYSVTRACATSFQSAVNVAESIMTGNIEIGIAGGADSSSVLPIGVSKKLAHALVDLNKARSFGQKLQIFRRLGIKDLLPVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALAHRS 209
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADA_PSEA6 (3-ketoacyl-CoA thiolase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=fadA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.691e-11 Identity = 57/198 (28.79%), Postives = 92/198 (46.46%), Query Frame = 2 Query: 71 RDVCIVGVARTPMGGFLGSL-SSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVFSAN-LGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVD---GMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSG 646 ++V +V RTPMG G + +V A L + + ++R N+ P ++++ +G V G AR A L IP SV T+N++C S M+A+ A I G D+ + GG+E M + P D +D G+ K MG+ AE+ ++ I+R+ QD++ RS + AA G Sbjct: 2 KEVVVVDCIRTPMGRSKGGIFRNVRAETLSAHLMSKLIERNPNLDPNEIEDIIWGCVQQTKEQGFNIARNAQLLTDIPRSVAAVTVNRLCGSSMQALHDATSGIMSGRGDVYMIGGVEHMGHVPM-------------DFNIDFHPGIAKTA---ARASGSMGMTAELLGRQNGISREMQDAFGARSHQKAHAAAVEG 183 The following BLAST results are available for this feature:
BLAST of FC923121 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 218
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923121 ID=FC923121; Name=FC923121; organism=Citrus clementina; type=EST; length=716bpback to top |