FC923121

Overview
NameFC923121
Unique NameFC923121
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length716
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig2973 contig Ccv1_Contig2973:92..807. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: THLA_STAEQ (Probable acetyl-CoA acyltransferase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=SERP0032 PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 7.290e-42
Identity = 89/201 (44.28%), Postives = 124/201 (61.69%), Query Frame = 2
Query:   98 RTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVFSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPVEMSSGRRKP 700
            RTP+G F G    + A +LG+  I   L+ + + P  + EV  GNV  A  GQ PAR AA+  G+P +V   T+NKVC SG+KA+ LA QSI  G N+IV+AGGMESMS +P  L  +R G ++G+ T+ D M+ DGL D +ND+ MG+ AE    ++ I+R EQD +A  S  +   AQ +G+F  EI PVE+   +  P
Sbjct:   11 RTPIGVFGGVFKDIPAYELGATVIRQILEHSQIDPNEINEVILGNVLQAGQGQNPARIAAIHGGVPEAVPSFTVNKVCGSGLKAIQLAYQSIVAGDNEIVIAGGMESMSQSPMLLKNSRFGFKMGNQTLEDSMIADGLTDKFNDYHMGITAENLVEQYQISRKEQDQFAFDSQQKASRAQQAGVFDAEIVPVEVPQRKGDP 211          
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: THIC_MOUSE (Acetyl-CoA acetyltransferase, cytosolic OS=Mus musculus GN=Acat2 PE=1 SV=2)

HSP 1 Score: 169.859 bits (429), Expect = 1.243e-41
Identity = 97/203 (47.78%), Postives = 130/203 (64.04%), Query Frame = 2
Query:   77 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVFSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPVEMSS 685
            V IV  ART +G F G+LS+V   ++G+  I+  L+RA V P  V EV FG+V +A  GQ P RQA++GAGIP SV   +   +C SG+KAV LAAQSI +G + IVVAGGME+MS AP +L   R G R+G   + D +L DGL D ++++ MG+ AE  A K  ++R+ QD  A+ S  R   AQ +G F  EI PV +SS
Sbjct:    8 VVIVSAARTAIGSFNGALSTVPVHEMGTTVIKEVLQRAKVAPEEVSEVIFGHVLTAGCGQNPTRQASVGAGIPYSVPAWSCQMICGSGLKAVCLAAQSIAMGDSTIVVAGGMENMSKAP-HLTHLRTGVRMGEVPLADSILCDGLTDAFHNYHMGITAENVAKKWQVSREAQDKVAVLSQNRAEHAQKAGHFDKEIVPVLVSS 209          
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: ATOB_ECOLI (Acetyl-CoA acetyltransferase OS=Escherichia coli (strain K12) GN=atoB PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.375e-40
Identity = 96/209 (45.93%), Postives = 130/209 (62.20%), Query Frame = 2
Query:   71 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVFSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYL-AEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPVEMSSGRR 694
            ++  IV   RT +G F GSL+S SA  LG+  I+ A++RA +    V EV  GNV  A LGQ PARQA L +G+  +V   T+NKVC SG+K+V LAAQ+IQ G    +VAGGME+MS AP  L A+AR G RLG   + D +L+DGL    + + MG+ AE  A ++ ITR+ QD  A+ S  +  AA  SG F  EI PV + + ++
Sbjct:    2 KNCVIVSAVRTAIGSFNGSLASTSAIDLGATVIKAAIERAKIDSQHVDEVIMGNVLQAGLGQNPARQALLKSGLAETVCGFTVNKVCGSGLKSVALAAQAIQAGQAQSIVAGGMENMSLAPYLLDAKARSGYRLGDGQVYDVILRDGLMCATHGYHMGITAENVAKEYGITREMQDELALHSQRKAAAAIESGAFTAEIVPVNVVTRKK 210          
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: THIC_HUMAN (Acetyl-CoA acetyltransferase, cytosolic OS=Homo sapiens GN=ACAT2 PE=1 SV=2)

HSP 1 Score: 166.007 bits (419), Expect = 1.796e-40
Identity = 97/203 (47.78%), Postives = 129/203 (63.55%), Query Frame = 2
Query:   77 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVFSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPVEMSS 685
            V IV  ART +G F G+L++V    LGS  I+  LKRA V P  V EV FG+V +A  GQ P RQA++GAGIP SV   +   +C SG+KAV LA QSI +G + IVVAGGME+MS AP +LA  R G ++G   + D +L DGL D +++  MG+ AE  A K  ++R++QD  A+ S  R   AQ +G F  EI PV +S+
Sbjct:    8 VVIVSAARTIIGSFNGALAAVPVQDLGSTVIKEVLKRATVAPEDVSEVIFGHVLAAGCGQNPVRQASVGAGIPYSVPAWSCQMICGSGLKAVCLAVQSIGIGDSSIVVAGGMENMSKAP-HLAYLRTGVKIGEMPLTDSILCDGLTDAFHNCHMGITAENVAKKWQVSREDQDKVAVLSQNRTENAQKAGHFDKEIVPVLVST 209          
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: THIL_MYCTU (Probable acetyl-CoA acetyltransferase OS=Mycobacterium tuberculosis GN=fadA4 PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.224e-40
Identity = 95/199 (47.74%), Postives = 122/199 (61.31%), Query Frame = 2
Query:   83 IVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVFSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPVEM 679
            IV  ARTP+G  +GSL   SA++LG+IAI+ AL++ANV   LV+ V  G V +A  GQ PARQAA+ AGI   V   TINK+C SG+ A+ LA Q I+    D+VVAGG ESM+ AP  L  +R G + G  T++D M  DGL DV+ D  MG   E   +    TR EQD YA  S  +  AA   G+FA E+ PV +
Sbjct:    2 IVAGARTPIGKLMGSLKDFSASELGAIAIKGALEKANVPASLVEYVIMGQVLTAGAGQMPARQAAVAAGIGWDVPALTINKMCLSGIDAIALADQLIRAREFDVVVAGGQESMTKAPHLLMNSRSGYKYGDVTVLDHMAYDGLHDVFTDQPMGALTEQRNDVDMFTRSEQDEYAAASHQKAAAAWKDGVFADEVIPVNI 200          
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: THIL_MYCBO (Probable acetyl-CoA acetyltransferase OS=Mycobacterium bovis GN=fadA4 PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.224e-40
Identity = 95/199 (47.74%), Postives = 122/199 (61.31%), Query Frame = 2
Query:   83 IVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVFSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPVEM 679
            IV  ARTP+G  +GSL   SA++LG+IAI+ AL++ANV   LV+ V  G V +A  GQ PARQAA+ AGI   V   TINK+C SG+ A+ LA Q I+    D+VVAGG ESM+ AP  L  +R G + G  T++D M  DGL DV+ D  MG   E   +    TR EQD YA  S  +  AA   G+FA E+ PV +
Sbjct:    2 IVAGARTPIGKLMGSLKDFSASELGAIAIKGALEKANVPASLVEYVIMGQVLTAGAGQMPARQAAVAAGIGWDVPALTINKMCLSGIDAIALADQLIRAREFDVVVAGGQESMTKAPHLLMNSRSGYKYGDVTVLDHMAYDGLHDVFTDQPMGALTEQRNDVDMFTRSEQDEYAAASHQKAAAAWKDGVFADEVIPVNI 200          
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: THIL_RHIME (Acetyl-CoA acetyltransferase OS=Rhizobium meliloti GN=phbA PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.427e-37
Identity = 87/198 (43.94%), Postives = 120/198 (60.61%), Query Frame = 2
Query:   77 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVFSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAP 670
            + I   ART +G F G+  +  A +LG+ AI+  L+RA V+   V EV  G V  A  GQ PARQAA+ AG+P       +N++C SG++AV L  Q I  G   ++VAGGMESMS AP + A  R G ++G   ++D M+KDGL D +  + MG+ AE  A K  +TR+EQD +A+ S  +  AAQ +G FA EI P
Sbjct:    6 IVIASAARTAVGSFNGAFGNTLAHELGAAAIKAVLERAGVEAGEVDEVILGQVLPAGEGQNPARQAAMKAGLPQEKTAWGMNQLCGSGLRAVALGMQQIATGDAKVIVAGGMESMSMAP-HCAHLRGGVKMGDYKMIDTMIKDGLTDAFYGYHMGITAENVARKWQLTREEQDEFALASQNKAEAAQKAGRFADEIVP 202          
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: THL_BACSU (Acetyl-CoA acetyltransferase OS=Bacillus subtilis GN=mmgA PE=2 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 2.271e-35
Identity = 91/211 (43.13%), Postives = 121/211 (57.35%), Query Frame = 2
Query:   71 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVFSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPVEMSSGRRKPS 703
            R   IV  ARTP G F G L  V A +LG I ++ AL++A V    V+    G V  A  GQ P+RQAA  AG+P SV   T+NKVC+SG++AV L  Q I+    DI+VAGGMESMSN P  +   R G+R+G   + D M+ DGL   +++  M V     A ++ I+R EQD +A+RS  R   A + G F  EI PV     + KP+
Sbjct:    2 RKTVIVSAARTPFGKFGGVLKEVKAAELGGIVMKEALQQAGVSGDDVEGNVMGMVVQAGSGQIPSRQAARLAGMPWSVPSETLNKVCASGLRAVTLCDQMIRAQDADILVAGGMESMSNIPYAVPAGRWGARMGDGELRDLMVYDGLTCAFDEVHMAVHGNTAAKEYAISRREQDEWALRSHARAAKAADEGKFQDEIVPVNWIGRKGKPN 212          
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: THIL_ZOORA (Acetyl-CoA acetyltransferase OS=Zoogloea ramigera GN=phbA PE=1 SV=4)

HSP 1 Score: 148.288 bits (373), Expect = 3.874e-35
Identity = 83/196 (42.35%), Postives = 115/196 (58.67%), Query Frame = 2
Query:   83 IVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVFSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAP 670
            ++  ART +G F G+ ++  A +LG+  I   L+RA V    V EV  G V  A  GQ PARQAA+ AG+P       +N++C SG++AV L  Q I  G   I+VAGGMESMS AP + A    G ++G   ++D M+KDGL D +  + MG  AE  A +  ++RDEQD++A+ S  +  AAQ  G F  EI P
Sbjct:    7 VIASARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMKAGVPQEATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMAP-HCAHLAGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVP 201          
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: THIM_HUMAN (3-ketoacyl-CoA thiolase, mitochondrial OS=Homo sapiens GN=ACAA2 PE=1 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 4.587e-28
Identity = 76/210 (36.19%), Postives = 110/210 (52.38%), Query Frame = 2
Query:   71 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVFSANLGQAP-ARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPVEMSSGRRK 697
            R V +V   RTP G + G L   +AT L   A + AL    V P  V  V  GNV  ++      AR   L  GIP      TIN++C SG ++++   Q I +   ++V+ GG ESMS AP  +   R G++LG D  ++  L   L D +    M + AE  A KH I+R+E D YA++S  R  AA ++G F  E+AP+E+ + + K
Sbjct:    5 RGVFVVAAKRTPFGAYGGLLKDFTATDLSEFAAKAALSAGKVSPETVDSVIMGNVLQSSSDAIYLARHVGLRVGIPKETPALTINRLCGSGFQSIVNGCQEICVKEAEVVLCGGTESMSQAPYCVRNVRFGTKLGSDIKLEDSLWVSLTDQHVQLPMAMTAENLAVKHKISREECDKYALQSQQRWKAANDAGYFNDEMAPIEVKTKKGK 214          
The following BLAST results are available for this feature:
BLAST of FC923121 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 218
Match NameE-valueIdentityDescription
THLA_STAEQ7.290e-4244.28Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]
THIC_MOUSE1.243e-4147.78Acetyl-CoA acetyltransferase, cytosolic OS=Mus mus... [more]
ATOB_ECOLI1.375e-4045.93Acetyl-CoA acetyltransferase OS=Escherichia coli (... [more]
THIC_HUMAN1.796e-4047.78Acetyl-CoA acetyltransferase, cytosolic OS=Homo sa... [more]
THIL_MYCTU5.224e-4047.74Probable acetyl-CoA acetyltransferase OS=Mycobacte... [more]
THIL_MYCBO5.224e-4047.74Probable acetyl-CoA acetyltransferase OS=Mycobacte... [more]
THIL_RHIME2.427e-3743.94Acetyl-CoA acetyltransferase OS=Rhizobium meliloti... [more]
THL_BACSU2.271e-3543.13Acetyl-CoA acetyltransferase OS=Bacillus subtilis ... [more]
THIL_ZOORA3.874e-3542.35Acetyl-CoA acetyltransferase OS=Zoogloea ramigera ... [more]
THIM_HUMAN4.587e-2836.193-ketoacyl-CoA thiolase, mitochondrial OS=Homo sap... [more]

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Properties
Property NameValue
Genbank descriptionC31701C11EF StrClemenN Citrus clementina cDNA clone C31701C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923121 ID=FC923121; Name=FC923121; organism=Citrus clementina; type=EST; length=716bp
GAAAGTTAAAGATTCTTTGAAGATACTATTTAGCATGGTGCCTTTAGAAC
CTTCAGAATCTATCAAAGCACGAGATGTTTGTATTGTGGGTGTTGCACGT
ACACCAATGGGAGGCTTTCTTGGCTCGCTCTCGTCTGTTTCAGCTACAAA
GCTGGGTTCCATTGCTATCGAATGTGCTCTTAAGAGGGCCAACGTGAAAC
CACTCCTTGTGCAAGAAGTCTTCTTTGGGAACGTTTTTAGCGCCAATTTA
GGACAGGCTCCCGCTAGACAGGCCGCCTTAGGTGCTGGGATTCCTAATTC
TGTCGTATGCACCACTATTAACAAAGTCTGTTCATCTGGGATGAAAGCTG
TAATGCTTGCTGCACAGAGTATTCAATTGGGTATCAATGATATTGTTGTT
GCGGGTGGCATGGAAAGCATGTCCAATGCGCCCAAGTATCTAGCAGAAGC
AAGAAAGGGATCTCGACTGGGACATGATACTATTGTTGATGGCATGCTCA
AAGATGGCCTGTGGGATGTCTATAATGACTTTGGGATGGGAGTATGTGCA
GAAATATGTGCTAATAAACATACCATAACAAGGGATGAGCAGGATTCATA
TGCTATTAGAAGCTTTTAGCGTGGGATTGCTGCACAAAATTCTGGTCTCT
TTGCTTGGGAAATCGCTCCGGTTGAAATGTCTAGTGGAAGAAGGAAACCA
TCATAATGTTGATAGG
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