FC923121

Overview
NameFC923121
Unique NameFC923121
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length716
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: CATF_ACIAD (Beta-ketoadipyl-CoA thiolase OS=Acinetobacter sp. (strain ADP1) GN=catF PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.094e-21
Identity = 71/212 (33.49%), Postives = 112/212 (52.83%), Query Frame = 2
Query:   83 IVGVARTPMGGFLGSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVFSANL-GQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEAR----KGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPVEMSSGRRKP 700
            IV   RTP G + G L++V A  LG+I I   ++R  +V    V +V +G    A    +   R +AL AG+P  V  TT+N++C S + A+ +AA++I+ G   +++AGG+ESMS AP  + ++     +  ++   T+    +   L  +Y    M   AE  A +  I R++QD +A  S  R  AAQ  G FA EI PV +   + +P
Sbjct:    6 IVDAIRTPFGRYAGGLAAVRADDLGAIPIAALIERNPSVNWAQVDDVIYGCANQAGEDNRNVGRMSALLAGLPVEVPATTVNRLCGSSLDAIAMAARAIKAGEAHLIIAGGVESMSRAPYVMGKSEGAFGRTQKIEDTTMGWRFINPKLKAMYGVDTMPQTAENVAEQFGIQREDQDQFAYTSQQRTAAAQAKGYFAKEIVPVTIPQRKGEP 217          
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADA_BACSU (3-ketoacyl-CoA thiolase OS=Bacillus subtilis GN=fadA PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.429e-21
Identity = 72/206 (34.95%), Postives = 107/206 (51.94%), Query Frame = 2
Query:   71 RDVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVF-SANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPVEMS 682
            ++  IV  ARTP+G    GSL++V    LG+I ++  LKRA      + ++  G     A  G   AR     AG+P +V   T+N+ CSSG++++  AA+ I LG  D  +AGG ESMS  P           +GH T  +  L +   + Y    MG  AE  A K+ ++R++QD++A+RS      A   G F  EI PVE++
Sbjct:    2 KEAVIVSGARTPVGKAKKGSLATVRPDDLGAICVKETLKRAGGYEGNIDDLIIGCATPEAEQGLNMARNIGALAGLPYTVPAITVNRYCSSGLQSIAYAAEKIMLGAYDTAIAGGAESMSQVP----------MMGHVTRPNLALAEKAPEYY--MSMGHTAEQVAKKYGVSREDQDAFAVRSHQNAAKALAEGKFKDEIVPVEVT 195          
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: THIK_ENCCU (3-ketoacyl-CoA thiolase, peroxisomal OS=Encephalitozoon cuniculi GN=FOX3 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.264e-21
Identity = 69/209 (33.01%), Postives = 105/209 (50.24%), Query Frame = 2
Query:   62 IKARDVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVFSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSN--APKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPVEM 679
            I   DV +VG  RTP+G    G L S+   +L + AI   +++  + P L++EV  G+  S+  G   AR   L AG+P       IN++C SG+++V L A+ I+ G  +I +AGG ESM++   PK    +R G+    +   D ML            +G  +E+    H +TR E D YA+ S  R + A   G F  EI P+ +
Sbjct:    2 ISHEDVVVVGALRTPIGRATRGKLRSLRNDELVTAAIRGIIEKTGIDPRLIEEVILGHCLSSMEGNVAARMGVLRAGVPVETPVMIINRLCGSGLESVGLIAEKIRSGRIEIGLAGGFESMTSYGLPKEYTLSRGGA---CEDAEDCMLT-----------LGEVSEMLGKTHGVTRSEADEYAVTSQKRALEATKKGHFLAEIIPMRV 196          
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: THIKB_CANTR (3-ketoacyl-CoA thiolase B, peroxisomal OS=Candida tropicalis PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.005e-20
Identity = 66/201 (32.84%), Postives = 102/201 (50.75%), Query Frame = 2
Query:   74 DVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVFSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPV 673
            DV IV   RT +G GF GS  +V +  + +  ++  +K+ N+ P L+++V  GNV +   G    R A L AGIP +     +N+ CSSG+ A+   A  I+ G  +  +AGG ESMS   +   + R   R+      D  ++  L        MG+  E  AN+  I+R+ QD +A +S+ +   A  SG F  EI P+
Sbjct:   26 DVVIVAAYRTAIGKGFKGSFRNVHSEFILTEFLKEFIKKTNIDPSLIEDVAIGNVLNQAAGATEHRGACLAAGIPYTAAFIAVNRFCSSGLMAISDIANKIKTGEIECGLAGGAESMSTNYR---DPRVAPRIDPHLADDAQMEKCL------IPMGITNENVANQFNISRERQDEFAAKSYNKAAKAVASGAFKSEILPI 217          
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: THIKA_CANTR (3-ketoacyl-CoA thiolase A, peroxisomal OS=Candida tropicalis PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.005e-20
Identity = 66/201 (32.84%), Postives = 102/201 (50.75%), Query Frame = 2
Query:   74 DVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVFSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPV 673
            DV IV   RT +G GF GS  SV +  + +  ++  +K+ N+ P L+++V  GNV +   G    R A L AGIP +     +N+ CSSG+ A+   A  I+ G  +  +AGG ESMS   +   + R   R+      D  ++  L        MG+  E  AN+  I+R+ QD +A +S+ +   A  +G F  EI P+
Sbjct:   26 DVVIVAAYRTAIGKGFKGSFRSVRSEFILTEFLKEFIKKTNIDPSLIEDVAIGNVLNQAAGATEHRGACLAAGIPYTAAFIAVNRFCSSGLMAISDIANKIKTGEIECGLAGGAESMSTNYR---DPRVAPRIDPHLADDAQMEKCL------IPMGITNENVANQFNISRERQDEFAAKSYNKAAKAVAAGAFKSEILPI 217          
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADA_MARAV (3-ketoacyl-CoA thiolase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=fadA PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.932e-18
Identity = 68/209 (32.54%), Postives = 96/209 (45.93%), Query Frame = 2
Query:   59 SIKARDVCIVGVARTPMGGFL-GSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVFSAN-LGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPVE 676
            S+  RDV +V   RTPMG    G   +V A  L +  IE   +R   + P  V++V +G V      G   ARQ +L   IP+     T+N++C S M A+  AAQ+IQ G  D+ + GG+E M + P         +   +      M             MG+ AE+ A  H ITR++QD +  RS      A   G F  EI P+E
Sbjct:    2 SLNPRDVVVVDCVRTPMGRAKNGCFRNVRAETLSAALIEALFERNPKLDPKEVEDVIWGCVNQTKEQGFNVARQISLLTRIPHESAAQTVNRLCGSAMSAIHTAAQAIQTGNGDVFLVGGVEHMGHVPMTEGFDHNPAASKYSAKASNM-------------MGLTAEMLAKMHGITREQQDEFGARSHRLAHEATQEGRFKNEIVPIE 197          
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADA_AERS4 (3-ketoacyl-CoA thiolase OS=Aeromonas salmonicida (strain A449) GN=fadA PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.932e-18
Identity = 73/207 (35.27%), Postives = 105/207 (50.72%), Query Frame = 2
Query:   71 RDVCIVGVARTPMGGFLG-SLSSVSATKLGS-IAIECALKRANVKPLLVQEVFFGNVFSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDT-IVDGMLKDGLWDVYNDFG-MGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPVE 676
            +DV IV   RTPMG   G +  +V A  L + +     L+  N+ P  ++++++G V      G   AR AAL AGIP  V   T+N++C S M+A+  A+++IQ+G  DI + GG+E M + P           + H      GM K     V    G MG+ AE+    H I+R +QD +A RS  R  AA   G FA EI  +E
Sbjct:    2 KDVVIVDCIRTPMGRSKGGAFRNVRAEDLSAHLMSSILLRNPNLDPNEIEDIYWGCVQQTLEQGFNIARNAALLAGIPKQVGAVTVNRLCGSSMQALHDASRAIQVGDGDIFIIGGVEHMGHVP-----------MSHGVDFHPGMAK----SVAKASGMMGLTAEMLGKLHGISRQQQDEFAARSHRRAYAATVEGRFAREIVGLE 193          
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADA_AERHH (3-ketoacyl-CoA thiolase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=fadA PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.295e-18
Identity = 74/207 (35.75%), Postives = 106/207 (51.21%), Query Frame = 2
Query:   71 RDVCIVGVARTPMGGFLG-SLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVFSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDT-IVDGMLKDGLWDVYNDFG-MGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPVE 676
            +DV IV   RTPMG   G +  +V A  L +  ++  L R  N+ P  ++++++G V      G   AR AAL AGIP  V   T+N++C S M+A+  A+++IQ+G  DI + GG+E M + P           + H      GM K     V    G MG+ AE+    H I+R +QD +A RS  R  AA   G FA EI  +E
Sbjct:    2 KDVVIVDCIRTPMGRSKGGAFRNVRAEDLSAHLMKSILLRNPNLDPNEIEDIYWGCVQQTLEQGFNIARNAALLAGIPKQVGAVTVNRLCGSSMQALHDASRAIQVGDGDIFIIGGVEHMGHVP-----------MSHGVDFHPGMAK----SVAKASGMMGLTAEMLGKLHGISRQQQDEFAARSHRRAHAATVEGRFAKEIVGLE 193          
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: THIK_YARLI (3-ketoacyl-CoA thiolase, peroxisomal OS=Yarrowia lipolytica GN=POT1 PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.621e-18
Identity = 69/229 (30.13%), Postives = 110/229 (48.03%), Query Frame = 2
Query:   11 DSLKILFSMVPLEPSESIKA------RDVCIVGVARTP-MGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVFSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPVE 676
            D L  L + +   P++ + A       DV I    RT    G  G     S+++L +  +E  +K + + P L+ +V  GNV +A  G    R A L AGIP +V    +N+ CSSG+ AV   A  I+ G  DI +  G+ESMSN     +     ++  ++      L            MG+ +E  A K+ ++R  QD++A +S+ +  AAQ +G F  EI P++
Sbjct:    2 DRLNNLATQLEQNPAKGLDAITSKNPDDVVITAAYRTAHTKGGKGLFKDTSSSELLASLLEGLVKESKIDPKLIGDVVCGNVLAAGAGATEHRAACLVAGIPETVPFVALNRQCSSGLMAVNDVANKIRAGQIDIGIGCGVESMSNQYGPNSVTPFSNKFQNNEEAKKCL----------IPMGITSENVAAKYNVSRKAQDAFAAKSYEKAAAAQAAGKFDQEILPIK 220          
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: THIKB_RAT (3-ketoacyl-CoA thiolase B, peroxisomal OS=Rattus norvegicus GN=Acaa1b PE=2 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 7.341e-18
Identity = 65/203 (32.02%), Postives = 102/203 (50.25%), Query Frame = 2
Query:   68 ARDVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVFSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPV 673
            A DV +V   RTP+G    G     +  +L S  +   L+   +KP  + ++  GNV     G A AR A   +GIP +V  + +N+ CSSG++AV   A  I+ G  DI +A G+ESM+     L+E      +    + +   +D L        MG+ +E  A +  I+R +QD++A+ S  +  +AQ+ G F  EI PV
Sbjct:   35 ASDVVVVHGRRTPIGRAGRGGFKDTTPDELLSAVLTAVLQDVKLKPECLGDISVGNVLQPGAGAAMARIAQFLSGIPETVPLSAVNRQCSSGLQAVANIAGGIRNGSYDIGMACGVESMT-----LSERGNPGNISSRLLENEKARDCL------IPMGITSENVAERFGISRQKQDAFALASQQKAASAQSKGCFRAEIVPV 226          
The following BLAST results are available for this feature:
BLAST of FC923121 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 218
Match NameE-valueIdentityDescription
CATF_ACIAD1.094e-2133.49Beta-ketoadipyl-CoA thiolase OS=Acinetobacter sp. ... [more]
FADA_BACSU1.429e-2134.953-ketoacyl-CoA thiolase OS=Bacillus subtilis GN=fa... [more]
THIK_ENCCU9.264e-2133.013-ketoacyl-CoA thiolase, peroxisomal OS=Encephalit... [more]
THIKB_CANTR6.005e-2032.843-ketoacyl-CoA thiolase B, peroxisomal OS=Candida ... [more]
THIKA_CANTR6.005e-2032.843-ketoacyl-CoA thiolase A, peroxisomal OS=Candida ... [more]
FADA_MARAV1.932e-1832.543-ketoacyl-CoA thiolase OS=Marinobacter aquaeolei ... [more]
FADA_AERS41.932e-1835.273-ketoacyl-CoA thiolase OS=Aeromonas salmonicida (... [more]
FADA_AERHH3.295e-1835.753-ketoacyl-CoA thiolase OS=Aeromonas hydrophila su... [more]
THIK_YARLI5.621e-1830.133-ketoacyl-CoA thiolase, peroxisomal OS=Yarrowia l... [more]
THIKB_RAT7.341e-1832.023-ketoacyl-CoA thiolase B, peroxisomal OS=Rattus n... [more]

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Properties
Property NameValue
Genbank descriptionC31701C11EF StrClemenN Citrus clementina cDNA clone C31701C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923121 ID=FC923121; Name=FC923121; organism=Citrus clementina; type=EST; length=716bp
GAAAGTTAAAGATTCTTTGAAGATACTATTTAGCATGGTGCCTTTAGAAC
CTTCAGAATCTATCAAAGCACGAGATGTTTGTATTGTGGGTGTTGCACGT
ACACCAATGGGAGGCTTTCTTGGCTCGCTCTCGTCTGTTTCAGCTACAAA
GCTGGGTTCCATTGCTATCGAATGTGCTCTTAAGAGGGCCAACGTGAAAC
CACTCCTTGTGCAAGAAGTCTTCTTTGGGAACGTTTTTAGCGCCAATTTA
GGACAGGCTCCCGCTAGACAGGCCGCCTTAGGTGCTGGGATTCCTAATTC
TGTCGTATGCACCACTATTAACAAAGTCTGTTCATCTGGGATGAAAGCTG
TAATGCTTGCTGCACAGAGTATTCAATTGGGTATCAATGATATTGTTGTT
GCGGGTGGCATGGAAAGCATGTCCAATGCGCCCAAGTATCTAGCAGAAGC
AAGAAAGGGATCTCGACTGGGACATGATACTATTGTTGATGGCATGCTCA
AAGATGGCCTGTGGGATGTCTATAATGACTTTGGGATGGGAGTATGTGCA
GAAATATGTGCTAATAAACATACCATAACAAGGGATGAGCAGGATTCATA
TGCTATTAGAAGCTTTTAGCGTGGGATTGCTGCACAAAATTCTGGTCTCT
TTGCTTGGGAAATCGCTCCGGTTGAAATGTCTAGTGGAAGAAGGAAACCA
TCATAATGTTGATAGG
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