FC923121
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADA_CHRSD (3-ketoacyl-CoA thiolase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=fadA PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.252e-17 Identity = 67/210 (31.90%), Postives = 103/210 (49.05%), Query Frame = 2 Query: 59 SIKARDVCIVGVARTPMGGFL-GSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVFSANLGQAP--ARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPVE 676 S+ RD+ +V RT M G+ +V A L + ++ R AN+ P V +V +G V + L Q+ AR AA+ GIP +V T+N++C S M A+ +A +I+ G+ D + GG+E M + P + H VD + MG+ AE+ H + R+EQD++ +RS R AA +G F EI VE Sbjct: 2 SLNPRDIVVVDAVRTAMAKAKHGAFRNVRAENLSAAVMQALFDRNANLVPAEVDDVIWGCV-NQTLEQSMNIARNAAIMTGIPRTVPAQTVNRLCGSSMSALHIATANIKAGMGDFYIIGGVEHMEHVP-----------MTHG--VDVNPAASKYAAKAAMMMGLTAELLGKMHGVGREEQDAFGVRSHQRAQAANENGYFDNEIVGVE 197
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: THIKA_RAT (3-ketoacyl-CoA thiolase A, peroxisomal OS=Rattus norvegicus GN=Acaa1a PE=2 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 3.643e-17 Identity = 64/203 (31.53%), Postives = 99/203 (48.77%), Query Frame = 2 Query: 68 ARDVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVFSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPV 673 A DV +V RTP+G G + +L S + L+ +KP + ++ GNV G AR A +GIP +V + +N+ CSSG++AV A I+ G DI +A G+ESMS L+ + + +D L MG+ +E A + I+R +QD++A+ S + +AQ+ G F EI PV Sbjct: 35 ASDVVVVHGRRTPIGRAGRGGFKDTTPDELLSAVLTAVLQDVKLKPECLGDISVGNVLEPGAGAVMARIAQFLSGIPETVPLSAVNRQCSSGLQAVANIAGGIRNGSYDIGMACGVESMS-----LSNRGNPGNISSRLLESDKARDCL------IPMGITSENVAERFGISRQKQDAFALASQQKAASAQSKGCFRAEIVPV 226
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADA_SHESW (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain W3-18-1) GN=fadA PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.643e-17 Identity = 66/205 (32.20%), Postives = 98/205 (47.80%), Query Frame = 2 Query: 71 RDVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIE-CALKRANVKPLLVQEVFFGNVFSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPVE 676 + IV RTPMG G +V A L + ++ L+ + P L+++V +G V G AR A+L AGIP + T+N++C S M A+ AA++I G+ D + GG+E M + P + GM MG+ AE+ H ITR++QD++A+RS R AA G FA EI +E Sbjct: 2 KQAVIVDCIRTPMGRSKAGVFRNVRAETLSAELMKGLLLRNPQLDPNLIEDVIWGCVQQTLEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMDAIHQAARAIMTGMGDTFIIGGVEHMGHVPMSHGVDFHPGLANNVAKASGM-------------MGLTAEMLGKLHGITREQQDAFAVRSHQRAYAATIEGRFAKEIYGIE 193
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADA_SHEPC (3-ketoacyl-CoA thiolase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=fadA PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.643e-17 Identity = 66/205 (32.20%), Postives = 98/205 (47.80%), Query Frame = 2 Query: 71 RDVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIE-CALKRANVKPLLVQEVFFGNVFSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPVE 676 + IV RTPMG G +V A L + ++ L+ + P L+++V +G V G AR A+L AGIP + T+N++C S M A+ AA++I G+ D + GG+E M + P + GM MG+ AE+ H ITR++QD++A+RS R AA G FA EI +E Sbjct: 2 KQAVIVDCIRTPMGRSKAGVFRNVRAETLSAELMKGLLLRNPQLDPNLIEDVIWGCVQQTLEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMDAIHQAARAIMTGMGDTFIIGGVEHMGHVPMSHGVDFHPGLANNVAKASGM-------------MGLTAEMLGKLHGITREQQDAFAVRSHQRAYAATVEGRFAKEIYGIE 193
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADA_SHEB8 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS185) GN=fadA PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.643e-17 Identity = 66/205 (32.20%), Postives = 98/205 (47.80%), Query Frame = 2 Query: 71 RDVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIE-CALKRANVKPLLVQEVFFGNVFSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPVE 676 + IV RTPMG G +V A L + ++ L+ + P L+++V +G V G AR A+L AGIP + T+N++C S M A+ AA++I G+ D + GG+E M + P + GM MG+ AE+ H ITR++QD++A+RS R AA G FA EI +E Sbjct: 2 KQAVIVDCIRTPMGRSKAGVFRNVRAETLSAELMKGLLLRNPQLDPNLIEDVIWGCVQQTLEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMDAIHQAARAIMTGMGDTFIIGGVEHMGHVPMSHGVDFHPGLANNVAKASGM-------------MGLTAEMLGKLHGITREQQDAFAVRSHQRAYAATVEGRFAKEIYGIE 193
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: THIKB_MOUSE (3-ketoacyl-CoA thiolase B, peroxisomal OS=Mus musculus GN=Acaa1b PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.758e-17 Identity = 63/203 (31.03%), Postives = 102/203 (50.25%), Query Frame = 2 Query: 68 ARDVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVFSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPV 673 A DV +V RTP+G G + +L S + L+ +KP + ++ GNV G AR A +GIP +V +T+N+ CSSG++AV A I+ G DI +A G+ESM+ L++ + + + +D L MG+ +E A + ++R +QD++A+ S + +AQ+ G F EI PV Sbjct: 35 ASDVVVVHGRRTPIGRASRGCFKDTTPDELLSAVLTAVLQDVKLKPEQLGDISVGNVLQPGAGAIMARIAQFLSGIPETVPLSTVNRQCSSGLQAVANIAGGIRNGSYDIGMACGVESMT-----LSQRGNHGNISSRLLENEKARDCL------IPMGITSENVAERFGVSRQKQDAFALASQQKAASAQSRGCFHAEIVPV 226
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: THIKA_MOUSE (3-ketoacyl-CoA thiolase A, peroxisomal OS=Mus musculus GN=Acaa1a PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.214e-17 Identity = 65/203 (32.02%), Postives = 100/203 (49.26%), Query Frame = 2 Query: 68 ARDVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVFSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPV 673 A DV +V RTP+G G + + +L S + L+ +KP + ++ GNV G AR A +GIP +V +T+N+ CSSG++AV A I+ G DI +A G+ESMS L+ + + +D L MG+ +E A + I+R +QD +A+ S + +AQ+ G F EI PV Sbjct: 35 ASDVVVVHGRRTPIGRASRGGFKNTTPDELLSAVLTAVLQDVRLKPEQLGDISVGNVLEPGAGAVMARIAQFLSGIPETVPLSTVNRQCSSGLQAVANIAGGIRNGSYDIGMACGVESMS-----LSGMGNPGNISSRLLESEKARDCLTP------MGMTSENVAERFGISRQKQDDFALASQQKAASAQSRGCFRAEIVPV 226
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADA_SHEB5 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=fadA PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.214e-17 Identity = 66/205 (32.20%), Postives = 97/205 (47.32%), Query Frame = 2 Query: 71 RDVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIE-CALKRANVKPLLVQEVFFGNVFSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPVE 676 + IV RTPMG G +V A L + ++ L+ + P L+++V +G V G AR A+L AGIP + T+N++C S M A+ AA++I G+ D + GG+E M + P GM MG+ AE+ H ITR++QD++A+RS R AA G FA EI +E Sbjct: 2 KQAVIVDCIRTPMGRSKAGVFRNVRAETLSAELMKGLLLRNPQLDPNLIEDVIWGCVQQTLEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMDAIHQAARAIMTGMGDTFIIGGVEHMGHVPMSHGVDFHPGLANKVAKASGM-------------MGLTAEMLGKLHGITREQQDAFAVRSHQRAYAATVEGRFAKEIYGIE 193
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADA_SHEON (3-ketoacyl-CoA thiolase OS=Shewanella oneidensis GN=fadA PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.116e-17 Identity = 65/205 (31.71%), Postives = 98/205 (47.80%), Query Frame = 2 Query: 71 RDVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIE-CALKRANVKPLLVQEVFFGNVFSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPVE 676 + IV RTPMG G +V A L + ++ L+ + P +++V +G V G AR A+L AGIP + T+N++C S M+A+ AA++I G+ D + GG+E M + P + GM MG+ AE+ H ITR++QD++A+RS R AA G FA EI +E Sbjct: 2 KQAVIVDCIRTPMGRSKAGVFRNVRAETLSAELMKGLLLRNPQLDPNTIEDVIWGCVQQTLEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMEAIHQAARAIMTGMGDTFIIGGVEHMGHVPMNHGVDFHPGLANNVAKASGM-------------MGLTAEMLGKLHGITREQQDAFAVRSHQRAYAATIEGRFAKEIYGIE 193
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADA_SHESM (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain MR-4) GN=fadA PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.384e-16 Identity = 65/205 (31.71%), Postives = 98/205 (47.80%), Query Frame = 2 Query: 71 RDVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIE-CALKRANVKPLLVQEVFFGNVFSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPVE 676 + IV RTPMG G +V A L + ++ L+ + P +++V +G V G AR A+L AGIP + T+N++C S M+A+ AA++I G+ D + GG+E M + P + GM MG+ AE+ H ITR++QD++A+RS R AA G FA EI +E Sbjct: 2 KQAVIVDCIRTPMGRSKAGVFRNVRAETLSAELMKGLLLRNPQLDPNTIEDVIWGCVQQTLEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMEAIHQAARAIMTGMGDTFIIGGVEHMGHVPMNHGVDFHPGLANNVAKASGM-------------MGLTAEMLGKLHGITREQQDAFAVRSHQRAHAATVEGRFAKEIYGIE 193 The following BLAST results are available for this feature:
BLAST of FC923121 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 218
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923121 ID=FC923121; Name=FC923121; organism=Citrus clementina; type=EST; length=716bpback to top |