FC923121
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADA_SHESA (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain ANA-3) GN=fadA PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.384e-16 Identity = 65/205 (31.71%), Postives = 98/205 (47.80%), Query Frame = 2 Query: 71 RDVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIE-CALKRANVKPLLVQEVFFGNVFSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPVE 676 + IV RTPMG G +V A L + ++ L+ + P +++V +G V G AR A+L AGIP + T+N++C S M+A+ AA++I G+ D + GG+E M + P + GM MG+ AE+ H ITR++QD++A+RS R AA G FA EI +E Sbjct: 2 KQAVIVDCIRTPMGRSKAGVFRNVRAETLSAELMKGLLLRNPQLDPNTIEDVIWGCVQQTLEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMEAIHQAARAIMTGMGDTFIIGGVEHMGHVPMNHGVDFHPGLANNVAKASGM-------------MGLTAEMLGKLHGITREQQDAFAVRSHQRAHAATVEGRFAKEIYGIE 193
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADA_SHELP (3-ketoacyl-CoA thiolase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=fadA PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.808e-16 Identity = 66/205 (32.20%), Postives = 95/205 (46.34%), Query Frame = 2 Query: 71 RDVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVFSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPVE 676 + IV RTPMG G ++ A L + ++ L R + P +++V +G V G AR AAL AGIP T+N++C S M+A+ AA++I G+ D + GG+E M + P + GM MG+ AE+ H ITR +QD +A+RS R AA G FA EI +E Sbjct: 2 KQAVIVDCIRTPMGRSKAGVFRNMRAESLSAELMKALLVRNPQLDPNTIEDVIWGCVQQTLEQGFNIARNAALLAGIPKQAGAVTVNRLCGSSMEAIHQAARAIMTGMGDTFIVGGVEHMGHVPMNHGVDFHPGLATNVAKASGM-------------MGLTAEMLGKMHGITRQQQDEFAVRSHQRAHAATVEGRFANEIHAIE 193
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADA_SHEDO (3-ketoacyl-CoA thiolase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=fadA PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.808e-16 Identity = 66/205 (32.20%), Postives = 97/205 (47.32%), Query Frame = 2 Query: 71 RDVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVFSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPVE 676 + IV RTPMG G +V A L + ++ L R + P L+++V +G V G AR A+L AGIP + T+N++C S M A+ AA++I G+ D + GG+E M + P GM MG+ AE+ H I+R++QD++A+RS R AA G FA EI +E Sbjct: 2 KQAVIVDCIRTPMGRSKAGVFRNVRAETLSAELMKALLIRNPQLDPSLIEDVIWGCVQQTLEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMDAIHQAARAIMTGMGDTFIIGGVEHMGHVPMNHGVDFHPGLANRVAKASGM-------------MGLTAEMLGKMHGISREQQDAFAVRSHQRAHAATVEGRFAKEIWAME 193
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: THL_CLODI (Acetyl-CoA acetyltransferase (Fragment) OS=Clostridium difficile GN=thi PE=3 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 2.361e-16 Identity = 46/93 (49.46%), Postives = 59/93 (63.44%), Query Frame = 2 Query: 71 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVFSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKA 349 R+V I ART +G F G+ SVSA +LG A + A+KRAN+ P ++ E G V +A LGQ ARQ ALGAGIP TIN VC SG+++ Sbjct: 2 REVVIASAARTAVGSFGGAFKSVSAVELGVTAAKEAIKRANITPDMIDESLLGGVLTAGLGQNIARQIALGAGIPVEKPAMTINIVCGSGLRS 94
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADA_PSEF5 (3-ketoacyl-CoA thiolase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=fadA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.361e-16 Identity = 68/212 (32.08%), Postives = 103/212 (48.58%), Query Frame = 2 Query: 59 SIKARDVCIVGVARTPMGGFLGSLS-SVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVFSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFG---MGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPVE 676 S+ RDV IV RTPMG G + + A + + I L+R A V P V++V +G V G AR A+L IP++ T++++C S M A+ AAQ+I G D+ V GG+E M GH +++ G+ + +Y MG+ AE+ H ITR++QD++ +RS A G F EI P++ Sbjct: 2 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNAKVDPAEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAGQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHM----------------GHVSMMHGVDPNPHMSLYAAKASGMMGLTAEMLGKMHGITREQQDAFGVRSHQLAHKATVEGKFKDEIIPMQ 197
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADA_SHESR (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain MR-7) GN=fadA PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.084e-16 Identity = 64/205 (31.22%), Postives = 98/205 (47.80%), Query Frame = 2 Query: 71 RDVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIE-CALKRANVKPLLVQEVFFGNVFSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPVE 676 + IV RTPMG G +V A L + ++ L+ + P +++V +G V G AR A+L AGIP + T+N++C S M+A+ AA++I G+ D + GG+E M + P + GM MG+ AE+ H I+R++QD++A+RS R AA G FA EI +E Sbjct: 2 KQAVIVDCIRTPMGRSKAGVFRNVRAETLSAELMKGLLLRNPQLDPNAIEDVIWGCVQQTLEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMEAIHQAARAIMTGMGDTFIIGGVEHMGHVPMNHGVDFHPGLANNVAKASGM-------------MGLTAEMLGKLHGISREQQDAFAVRSHQRAHAATVEGRFAKEIYAIE 193
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADA_PSEFR (3-ketoacyl-CoA thiolase OS=Pseudomonas fragi GN=fadA PE=1 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 4.028e-16 Identity = 67/212 (31.60%), Postives = 104/212 (49.06%), Query Frame = 2 Query: 59 SIKARDVCIVGVARTPMGGFLGSLS-SVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVFSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFG---MGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPVE 676 S+ RDV IV RTPMG G + + A + + I L+R + V P V++V +G V G AR A+L IP++ T++++C S M A+ AAQ+I G D+ V GG+E M GH +++ G+ + +Y MG+ AE+ H I+R++QD++A+RS A G F EI P++ Sbjct: 2 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHM----------------GHVSMMHGVDPNPHMSLYAAKASGMMGLTAEMLGKMHGISREQQDAFAVRSHQLAHKATVEGKFKDEIIPMQ 197
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADA_ALISL (3-ketoacyl-CoA thiolase OS=Aliivibrio salmonicida (strain LFI1238) GN=fadA PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.261e-16 Identity = 64/205 (31.22%), Postives = 101/205 (49.27%), Query Frame = 2 Query: 71 RDVCIVGVARTPMGGFL-GSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVFSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPVE 676 ++V IV RTPMG G A L + ++ L+R NV P ++++++G V G AR A+L AG+P S+ TT+N++C S M+A+ A+++I +G DI + GG+E M + P + GM MG+ AE+ H I+R++QD++A S + A G F EI P+E Sbjct: 2 KNVVIVDCIRTPMGRSKNGVFRHTRAEDLSAHLMKGLLERNPNVDPNQIEDIYWGCVQQTLEQGFNIARNASLLAGLPKSIAATTVNRLCGSSMQALHDASRAIMVGDADICIIGGVEHMGHVPMNHGVDFHSGLSKNVAKASGM-------------MGLTAEMLGKMHGISREQQDAFAFASHQKAHRATIEGHFDSEILPME 193
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADA_ALCBS (3-ketoacyl-CoA thiolase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=fadA PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.261e-16 Identity = 65/209 (31.10%), Postives = 99/209 (47.37%), Query Frame = 2 Query: 59 SIKARDVCIVGVARTPMGGFL-GSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVFSAN-LGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPVE 676 S+ +DV IV RTPMG G V A KL + I+ + R N L ++V +G V G AR ++ AG+P + T+N++C S M+A+ A+QSI G D+ V GG+E M + + H ++ + N MG+ AE+ H ITR++QD++ +RS A G + EI P+E Sbjct: 2 SLNPKDVVIVDAVRTPMGKSRNGQFRHVRAEKLSAQLIQALMARNPNWDIQLTEDVIWGCVNQTKEQGMNIARNISMLAGLPRTSAAQTVNRLCGSSMQALHSASQSIMTGNGDVFVIGGVEHMGHV-----------AMDHGIDLNPEMSKVTAKASN--MMGLTAEMLGKMHGITREQQDAFGVRSHKLAWEATQQGRWDNEIVPIE 197
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: THIK_HUMAN (3-ketoacyl-CoA thiolase, peroxisomal OS=Homo sapiens GN=ACAA1 PE=1 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 6.871e-16 Identity = 66/215 (30.70%), Postives = 102/215 (47.44%), Query Frame = 2 Query: 44 LEPSESIKARDVCIV-----GVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVFSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPV 673 L + A DV +V + R GGF + +L S + LK N++P + ++ GNV G AR A + IP +V +T+N+ CSSG++AV A I+ G DI +A G+ESMS LA+ + + +D L MG+ +E A + I+R++QD++A+ S + AQ+ G F EI PV Sbjct: 27 LSGAPQASAADVVVVHGRRTAICRAGRGGF----KDTTPDELLSAVMTAVLKDVNLRPEQLGDICVGNVLQPGAGAIMARIAQFLSDIPETVPLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMS-----LADRGNPGNITSRLMEKEKARDCL------IPMGITSENVAERFGISREKQDTFALASQQKAARAQSKGCFQAEIVPV 226 The following BLAST results are available for this feature:
BLAST of FC923121 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 218
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923121 ID=FC923121; Name=FC923121; organism=Citrus clementina; type=EST; length=716bpback to top |