FC923121
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADA_PSEPF (3-ketoacyl-CoA thiolase OS=Pseudomonas fluorescens (strain Pf0-1) GN=fadA PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.871e-16 Identity = 67/212 (31.60%), Postives = 102/212 (48.11%), Query Frame = 2 Query: 59 SIKARDVCIVGVARTPMGGFLGSLS-SVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVFSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFG---MGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPVE 676 S+ RDV IV RTPMG G + + A + + I L+R V P V++V +G V G AR A+L IP++ T++++C S M A+ AAQ+I G D+ V GG+E M GH +++ G+ + +Y MG+ AE+ H ITR++QD++ +RS A G F EI P++ Sbjct: 2 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNTKVDPAEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAGQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHM----------------GHVSMMHGVDPNPHMSLYAAKASGMMGLTAEMLGKMHGITREQQDAFGVRSHQLAHKATVEGKFKDEIIPMQ 197
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADA_PHOPR (3-ketoacyl-CoA thiolase OS=Photobacterium profundum GN=fadA PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.973e-16 Identity = 68/206 (33.01%), Postives = 103/206 (50.00%), Query Frame = 2 Query: 74 DVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVFSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDT-IVDGMLKDGLWDVYNDFG-MGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPVE 676 +V IV RTPMG G+ +V A L + ++ + R + P ++++++G V G AR A+L AGIP++V TT+N++C S M+A+ A ++I +G + + GG+E M + P + H GM K V G MG+ AE+ H I+R QD +A RS R AA G F EI P+E Sbjct: 3 NVVIVDCIRTPMGRSKAGAFRNVRAEDLSAHLMKGLISRNPQLDPNSIEDIYWGCVQQTLEQGFNVARNASLLAGIPHTVAATTVNRLCGSSMQALHDATRAIMVGDAETCIIGGVEHMGHVP-----------MNHGVDFHPGMSK----SVAKAAGMMGLTAEMLGRMHGISRQMQDEFAARSHQRAHAATIEGRFKNEILPIE 193
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADA_VIBFM (3-ketoacyl-CoA thiolase OS=Vibrio fischeri (strain MJ11) GN=fadA PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.172e-15 Identity = 63/205 (30.73%), Postives = 103/205 (50.24%), Query Frame = 2 Query: 71 RDVCIVGVARTPMGGFL-GSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVFSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPVE 676 ++V IV RTPMG G A L + ++ LKR +V P ++++++G V G AR +AL AG+P S+ TT+N++C S M+A+ A+++I +G +I + GG+E M + P + H L + MG+ AE+ H I+R++QD++A+ S + A G F EI P+E Sbjct: 2 KNVVIVDCIRTPMGRSKNGVFRYTRAEDLSAHLMKGLLKRNPSVDPNDIEDIYWGCVQQTLEQGFNIARNSALLAGLPQSIAATTVNRLCGSSMQALHDASRAIMVGDAEICIIGGVEHMGHVP-----------MNHGVDFHSGLSKSVAKASG--MMGLTAEMLGKMHGISREQQDAFALASHQKAHKATIEGYFDSEILPIE 193
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADA_SHEAM (3-ketoacyl-CoA thiolase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=fadA PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.172e-15 Identity = 64/205 (31.22%), Postives = 97/205 (47.32%), Query Frame = 2 Query: 71 RDVCIVGVARTPMGGFLGSL-SSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVFSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPVE 676 + IV RTPMG G + +V A L + ++ L R V P +++V +G V G AR A+L AG+P + T+N++C S M+A+ A+++I G+ D + GG+E M + P + GM MG+ AE+ H I+R+ QD +A+RS R AA G FA EI +E Sbjct: 2 KQAVIVDCIRTPMGRSKGGVFRNVRAETLSAELMKALLLRNPGVDPNTIEDVIWGCVQQTLEQGFNIARNASLLAGVPKTAGAVTVNRLCGSSMEALHQASRAIMTGMGDTFIIGGVEHMGHVPMNHGVDFHPGLAANVAKASGM-------------MGLTAEMLGKLHGISREMQDQFAVRSHQRAHAASIEGRFANEIYAIE 193
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADA_VIBF1 (3-ketoacyl-CoA thiolase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=fadA PE=3 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 1.531e-15 Identity = 63/205 (30.73%), Postives = 103/205 (50.24%), Query Frame = 2 Query: 71 RDVCIVGVARTPMGGFL-GSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVFSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPVE 676 ++V IV RTPMG G A L + ++ LKR +V P ++++++G V G AR +AL AG+P S+ TT+N++C S M+A+ A+++I +G +I + GG+E M + P + H L + MG+ AE+ H I+R++QD++A+ S + A G F EI P+E Sbjct: 2 KNVVIVDCIRTPMGRSKNGVFRHTRAEDLSAHLMKGLLKRNPSVDPNDIEDIYWGCVQQTLEQGFNIARNSALLAGLPQSIAATTVNRLCGSSMQALHDASRAIMVGDAEICIIGGVEHMGHVP-----------MNHGVDFHSGLSKSVAKASG--MMGLTAEMLGKMHGISREQQDAFALASHQKAHKATIEGYFDSEILPME 193
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADA_PSESM (3-ketoacyl-CoA thiolase OS=Pseudomonas syringae pv. tomato GN=fadA PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.531e-15 Identity = 66/209 (31.58%), Postives = 96/209 (45.93%), Query Frame = 2 Query: 59 SIKARDVCIVGVARTPMGGFLGSLS-SVSATKLGSIAIECALKRAN-VKPLLVQEVFFGNVFSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPVE 676 S+ RDV IV RTPMG G + + A + + I L+R N V P V++V +G V G AR A+L IP++ T++++C S M A+ AAQ+I D+ V GG+E M + H GM MG+ AE+ H ITR++QD++ +RS A G F EI P++ Sbjct: 2 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNNKVDPAEVEDVIWGCVNQTLEQGWNIARMASLLTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTNNGDVFVIGGVEHMGHVSMMHGVDPNPHMSLHAAKASGM-------------MGLTAEMLGKMHGITREQQDAFGLRSHQLAHKATLEGKFKDEIIPMQ 197
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADA_PSE14 (3-ketoacyl-CoA thiolase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=fadA PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.531e-15 Identity = 66/209 (31.58%), Postives = 96/209 (45.93%), Query Frame = 2 Query: 59 SIKARDVCIVGVARTPMGGFLGSLS-SVSATKLGSIAIECALKRAN-VKPLLVQEVFFGNVFSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPVE 676 S+ RDV IV RTPMG G + + A + + I L+R N V P V++V +G V G AR A+L IP++ T++++C S M A+ AAQ+I D+ V GG+E M + H GM MG+ AE+ H ITR++QD++ +RS A G F EI P++ Sbjct: 2 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNNKVDPAEVEDVIWGCVNQTLEQGWNIARMASLLTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTNNGDVFVIGGVEHMGHVSMMHGVDPNPHMSLHAAKASGM-------------MGLTAEMLGKMHGITREQQDAFGLRSHQLAHKATLEGKFKDEIIPMQ 197
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADA_SACD2 (3-ketoacyl-CoA thiolase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=fadA PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.999e-15 Identity = 66/205 (32.20%), Postives = 93/205 (45.37%), Query Frame = 2 Query: 59 SIKARDVCIVGVARTPMGGFL-GSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVFS-ANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEI 664 S++ RDV IV ARTPMG G +V A L + I L R A + P + ++ +G V G AR L AG+P++V T+N++C S M A+ AA +I G+ D+ + GG+E M + LGH MG+ AE + H ITR+ D + RS + A G FA EI Sbjct: 2 SLQPRDVVIVDYARTPMGRSKNGCYRNVRADDLSADLITGLLARNAALDPAQIDDMIWGCVMQRGEQGFNVARNILLRAGLPHTVPAQTVNRLCGSSMSALHTAAANIMAGLGDVYLVGGVEHMGHIDMN-QHVDPNPALGHSV------------AQAAGSMGLTAEYLSLLHGITREAMDEFGARSHRKAAEATEQGKFAREI 193
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADA_PSEU2 (3-ketoacyl-CoA thiolase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=fadA PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.999e-15 Identity = 65/209 (31.10%), Postives = 96/209 (45.93%), Query Frame = 2 Query: 59 SIKARDVCIVGVARTPMGGFLGSLS-SVSATKLGSIAIECALKRAN-VKPLLVQEVFFGNVFSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPVE 676 S+ RDV IV RTPMG G + + A + + I L+R N V P V++V +G V G AR A+L IP++ T++++C S M A+ AAQ+I D+ + GG+E M + H GM MG+ AE+ H ITR++QD++ +RS A G F EI P++ Sbjct: 2 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNNKVDPAEVEDVIWGCVNQTLEQGWNIARMASLLTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTNNGDVFIIGGVEHMGHVSMMHGVDPNPHMSLHAAKASGM-------------MGLTAEMLGKMHGITREQQDAFGLRSHQLAHKATLEGKFKDEIIPMQ 197
BLAST of FC923121 vs. ExPASy Swiss-Prot
Match: FADA_PSEPK (3-ketoacyl-CoA thiolase OS=Pseudomonas putida (strain KT2440) GN=fadA PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.999e-15 Identity = 66/209 (31.58%), Postives = 95/209 (45.45%), Query Frame = 2 Query: 59 SIKARDVCIVGVARTPMGGFLGSLS-SVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVFSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF*RGIAAQNSGLFAWEIAPVE 676 S+ RDV IV RTPMG G + + A + + I L+R V P V++V +G V G AR A+L IP++ T++++C S M A+ AAQ+I G D+ V GG+E M + H GM MG+ AE+ H ITR++QD + +RS A G F EI P++ Sbjct: 2 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNGKVDPKEVEDVIWGCVNQTLEQGWNIARMASLMTPIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGHVSMMHGVDPNPHLSLHAAKASGM-------------MGLTAEMLGKMHGITREQQDLFGLRSHQLAHKATVEGKFKDEIIPMQ 197 The following BLAST results are available for this feature:
BLAST of FC923121 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 218
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923121 ID=FC923121; Name=FC923121; organism=Citrus clementina; type=EST; length=716bpback to top |