FC923129

Overview
NameFC923129
Unique NameFC923129
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length699
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923129 vs. ExPASy Swiss-Prot
Match: DNAJ_LACF3 (Chaperone protein dnaJ OS=Lactobacillus fermentum (strain IFO 3956 / LMG 18251) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.903e-11
Identity = 35/65 (53.85%), Postives = 46/65 (70.77%), Query Frame = 1
Query:  223 EPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAAEVFKTISCAYEVLSNEVTRTKYDR 417
            E D Y VLGV + A+ A+IKRAYR LA KYHPDV+ +  A + FK I+ AYE LS++  R +YD+
Sbjct:    3 EEDLYDVLGVKKDASEAEIKRAYRKLAAKYHPDVNHEPGAEKKFKKINEAYETLSDDQKRAQYDQ 67          
BLAST of FC923129 vs. ExPASy Swiss-Prot
Match: DNAJ_LACBA (Chaperone protein dnaJ OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.903e-11
Identity = 33/66 (50.00%), Postives = 47/66 (71.21%), Query Frame = 1
Query:  223 EPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAAEVFKTISCAYEVLSNEVTRTKYDRA 420
            + D Y VLGVA+ A+  +IK+AYR L++KYHPD++K   AAE FK +  AY+VL +E  R  YD++
Sbjct:    3 QSDLYGVLGVAKDASQDEIKKAYRKLSKKYHPDLNKAPDAAEKFKEVQDAYDVLGDEQKRANYDQS 68          
BLAST of FC923129 vs. ExPASy Swiss-Prot
Match: DNJA3_HUMAN (DnaJ homolog subfamily A member 3, mitochondrial OS=Homo sapiens GN=DNAJA3 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.791e-11
Identity = 33/63 (52.38%), Postives = 48/63 (76.19%), Query Frame = 1
Query:  229 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDS-RAAEVFKTISCAYEVLSNEVTRTKYD 414
            D+Y++LGV ++A+  +IK+AY  LA+KYHPD +KD  +A E F  ++ AYEVLS+EV R +YD
Sbjct:   93 DYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYD 155          
BLAST of FC923129 vs. ExPASy Swiss-Prot
Match: DNAJ_RICTY (Chaperone protein dnaJ OS=Rickettsia typhi GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.791e-11
Identity = 32/63 (50.79%), Postives = 46/63 (73.02%), Query Frame = 1
Query:  229 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAAEVFKTISCAYEVLSNEVTRTKYDR 417
            D+Y+VLGV+++A+ ADIK+AY  LA++YHPD +    A + FK I+ AY+VL +E  R  YDR
Sbjct:    4 DYYQVLGVSKTASQADIKKAYLKLAKQYHPDTTNAHDAEKKFKEINAAYDVLKDEQKRAAYDR 66          
BLAST of FC923129 vs. ExPASy Swiss-Prot
Match: DNAJ_PELLD (Chaperone protein dnaJ OS=Pelodictyon luteolum (strain DSM 273) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.791e-11
Identity = 35/64 (54.69%), Postives = 49/64 (76.56%), Query Frame = 1
Query:  229 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAAE-VFKTISCAYEVLSNEVTRTKYDR 417
            D+Y+VLGV++SA   +IK+AYR LA KYHPD + D++ AE  FK ++ AYEVLSN+  R +YD+
Sbjct:    4 DYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKDAEDHFKEVNEAYEVLSNDDKRRRYDQ 67          
BLAST of FC923129 vs. ExPASy Swiss-Prot
Match: DNAJ_BORPE (Chaperone protein dnaJ OS=Bordetella pertussis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.791e-11
Identity = 36/64 (56.25%), Postives = 46/64 (71.88%), Query Frame = 1
Query:  229 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSR-AAEVFKTISCAYEVLSNEVTRTKYDR 417
            D+Y+VLGVA++A+  D+K+AYR LA KYHPD + DS+ A E FK    AYEVL +E  R  YDR
Sbjct:    5 DYYEVLGVAKNASDEDLKKAYRKLAMKYHPDRNPDSKEAEEKFKEAKEAYEVLGDEQKRAAYDR 68          
BLAST of FC923129 vs. ExPASy Swiss-Prot
Match: DNAJ_BORPA (Chaperone protein dnaJ OS=Bordetella parapertussis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.791e-11
Identity = 36/64 (56.25%), Postives = 46/64 (71.88%), Query Frame = 1
Query:  229 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSR-AAEVFKTISCAYEVLSNEVTRTKYDR 417
            D+Y+VLGVA++A+  D+K+AYR LA KYHPD + DS+ A E FK    AYEVL +E  R  YDR
Sbjct:    5 DYYEVLGVAKNASDEDLKKAYRKLAMKYHPDRNPDSKEAEEKFKEAKEAYEVLGDEQKRAAYDR 68          
BLAST of FC923129 vs. ExPASy Swiss-Prot
Match: DNAJ_BORBR (Chaperone protein dnaJ OS=Bordetella bronchiseptica GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.791e-11
Identity = 36/64 (56.25%), Postives = 46/64 (71.88%), Query Frame = 1
Query:  229 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSR-AAEVFKTISCAYEVLSNEVTRTKYDR 417
            D+Y+VLGVA++A+  D+K+AYR LA KYHPD + DS+ A E FK    AYEVL +E  R  YDR
Sbjct:    5 DYYEVLGVAKNASDEDLKKAYRKLAMKYHPDRNPDSKEAEEKFKEAKEAYEVLGDEQKRAAYDR 68          
BLAST of FC923129 vs. ExPASy Swiss-Prot
Match: DNAJ_BACSK (Chaperone protein dnaJ OS=Bacillus clausii (strain KSM-K16) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.791e-11
Identity = 30/63 (47.62%), Postives = 47/63 (74.60%), Query Frame = 1
Query:  229 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAAEVFKTISCAYEVLSNEVTRTKYDR 417
            D+Y+VLGV ++A++ ++K+AYR LARKYHPDV+K+  A   FK +  AY+ LS+   + +YD+
Sbjct:    5 DYYEVLGVDRNASVEEVKKAYRKLARKYHPDVNKEEDAEAKFKEVKEAYDTLSDPQKKARYDQ 67          
BLAST of FC923129 vs. ExPASy Swiss-Prot
Match: DNAJ2_THET8 (Chaperone protein dnaJ 2 OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=dnaJ2 PE=3 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 3.791e-11
Identity = 34/62 (54.84%), Postives = 44/62 (70.97%), Query Frame = 1
Query:  229 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAAEVFKTISCAYEVLSNEVTRTKYD 414
            D+Y +LGV ++AT  +IKRAY+ LAR+YHPDV+K   A E FK I+ AY VLS+   R  YD
Sbjct:    6 DYYAILGVPRNATQEEIKRAYKRLARQYHPDVNKSPEAEEKFKEINEAYAVLSDPEKRRIYD 67          
The following BLAST results are available for this feature:
BLAST of FC923129 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 139
Match NameE-valueIdentityDescription
DNAJ_LACF32.903e-1153.85Chaperone protein dnaJ OS=Lactobacillus fermentum ... [more]
DNAJ_LACBA2.903e-1150.00Chaperone protein dnaJ OS=Lactobacillus brevis (st... [more]
DNJA3_HUMAN3.791e-1152.38DnaJ homolog subfamily A member 3, mitochondrial O... [more]
DNAJ_RICTY3.791e-1150.79Chaperone protein dnaJ OS=Rickettsia typhi GN=dnaJ... [more]
DNAJ_PELLD3.791e-1154.69Chaperone protein dnaJ OS=Pelodictyon luteolum (st... [more]
DNAJ_BORPE3.791e-1156.25Chaperone protein dnaJ OS=Bordetella pertussis GN=... [more]
DNAJ_BORPA3.791e-1156.25Chaperone protein dnaJ OS=Bordetella parapertussis... [more]
DNAJ_BORBR3.791e-1156.25Chaperone protein dnaJ OS=Bordetella bronchiseptic... [more]
DNAJ_BACSK3.791e-1147.62Chaperone protein dnaJ OS=Bacillus clausii (strain... [more]
DNAJ2_THET83.791e-1154.84Chaperone protein dnaJ 2 OS=Thermus thermophilus (... [more]

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Properties
Property NameValue
Genbank descriptionC31701D07EF StrClemenN Citrus clementina cDNA clone C31701D07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923129 ID=FC923129; Name=FC923129; organism=Citrus clementina; type=EST; length=699bp
GGAACAAATGCATGAACGATAATGCAGGCGCAGCTACTGGTGGGACCCAT
AACTCCCACCACCGGCTCCGATGCGTTCTCCTCCATCATCAAAAACAGTT
TCCTGATCTCCTCTCCTCGCCGCAGCACCACCGGCAGTAACCGCCACAGA
AGAACCCGCCACCGCTTGGTGGTCGCGTCATCGTCTTGGTCATCATCCGC
GGCGGCGGCGGCCATAAACGGCGAGCCGGACCATTACAAAGTTCTGGGCG
TCGCTCAAAGTGCCACGCTAGCTGATATAAAGAGGGCTTATCGCCTCCTC
GCTCGTAAGTATCATCCTGATGTTAGCAAGGATTCACGAGCGGCTGAAGT
GTTCAAGACCATCAGTTGTGCTTATGAAGTATTATCTAATGAAGTAACAA
GAACTAAGTATGATCGGGCACTCAAATTTCGAAATGATAGTGACAGATCA
CGTAGAGGAAACAGGAGGTACAGCAGTGAATTTGAAGACGGGGTAAGGAT
CTCTACATGGGCTGAACTGAGGCGAAAACTGCAATATGAGAGACATTGGA
AAAATTATAACTCANAAGAAGAGTATTCTTCCTTCTATCGTAAAGCACCA
GTCCGGGAAGTTCAAGAGGAAAACCCAGGTGATAAGAGAGGCTCCTTTAC
TGCAGTGCTAAGATCAGCATTTATCTCTTTATCTTACTGAANGTCTTTG
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