FC923129

Overview
NameFC923129
Unique NameFC923129
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length699
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC923129 vs. ExPASy Swiss-Prot
Match: DNAJ_GLOVI (Chaperone protein dnaJ OS=Gloeobacter violaceus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.102e-13
Identity = 36/63 (57.14%), Postives = 48/63 (76.19%), Query Frame = 1 
Query:  229 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAAEVFKTISCAYEVLSNEVTRTKYDR 417
            D Y+ L V++ A+  DIKRAYR LAR+YHPDV+KD+ A + FK +S AYEVLS++  R +YDR
Sbjct:    4 DLYETLNVSRDASKEDIKRAYRKLARQYHPDVNKDAGAEDTFKELSRAYEVLSDDDQRARYDR 66
[Close]
BLAST of FC923129 vs. ExPASy Swiss-Prot
Match: DNAJ_GEOSW (Chaperone protein dnaJ OS=Geobacillus sp. (strain WCH70) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.102e-13
Identity = 34/63 (53.97%), Postives = 50/63 (79.37%), Query Frame = 1 
Query:  229 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAAEVFKTISCAYEVLSNEVTRTKYDR 417
            D+Y++LGV+++AT  +IK+AYR L++KYHPD++K+  AAE FK I  AYEVLS++  R  YD+
Sbjct:    5 DYYEILGVSKNATKEEIKKAYRKLSKKYHPDINKEPDAAEKFKEIKEAYEVLSDDQKRAHYDQ 67
[Close]
BLAST of FC923129 vs. ExPASy Swiss-Prot
Match: DNAJ_BACTR (Chaperone protein dnaJ OS=Bacillus thermoglucosidasius GN=dnaJ PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.102e-13
Identity = 34/63 (53.97%), Postives = 50/63 (79.37%), Query Frame = 1 
Query:  229 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAAEVFKTISCAYEVLSNEVTRTKYDR 417
            D+Y++LGV+++AT  +IK+AYR L++KYHPD++K+  AAE FK I  AYEVLS++  R  YD+
Sbjct:    5 DYYEILGVSKNATKEEIKKAYRKLSKKYHPDINKEPDAAEKFKEIKEAYEVLSDDQKRAHYDQ 67
[Close]
BLAST of FC923129 vs. ExPASy Swiss-Prot
Match: DNAJ_GEOTN (Chaperone protein dnaJ OS=Geobacillus thermodenitrificans (strain NG80-2) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.051e-13
Identity = 35/63 (55.56%), Postives = 50/63 (79.37%), Query Frame = 1 
Query:  229 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAAEVFKTISCAYEVLSNEVTRTKYDR 417
            D+Y+VLGV+++AT  +IK+AYR L+++YHPD++K   AAE FK I  AYEVLS++  R +YDR
Sbjct:    5 DYYEVLGVSKNATKDEIKKAYRKLSKQYHPDINKAPDAAEKFKEIKEAYEVLSDDEKRARYDR 67
[Close]
BLAST of FC923129 vs. ExPASy Swiss-Prot
Match: DNAJ_GEOKA (Chaperone protein dnaJ OS=Geobacillus kaustophilus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.051e-13
Identity = 35/63 (55.56%), Postives = 50/63 (79.37%), Query Frame = 1 
Query:  229 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAAEVFKTISCAYEVLSNEVTRTKYDR 417
            D+Y++LGV+++AT  +IK+AYR L+++YHPDV+K   AAE FK I  AYEVLS++  R +YDR
Sbjct:    5 DYYEILGVSKNATKDEIKKAYRKLSKQYHPDVNKAPDAAEKFKEIKEAYEVLSDDEKRARYDR 67
[Close]
BLAST of FC923129 vs. ExPASy Swiss-Prot
Match: DNAJ_BACCR (Chaperone protein dnaJ OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.051e-13
Identity = 34/63 (53.97%), Postives = 49/63 (77.78%), Query Frame = 1 
Query:  229 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAAEVFKTISCAYEVLSNEVTRTKYDR 417
            D+Y+VLG+++ A+  +IK+AYR LA+KYHPDVSK+  A E FK +  AYEVLS++  R +YD+
Sbjct:    5 DYYEVLGLSKGASTDEIKKAYRRLAKKYHPDVSKEENAIEKFKEVQEAYEVLSDDQKRAQYDQ 67
[Close]
BLAST of FC923129 vs. ExPASy Swiss-Prot
Match: DNAJ_BACC4 (Chaperone protein dnaJ OS=Bacillus cereus (strain B4264) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.051e-13
Identity = 34/63 (53.97%), Postives = 49/63 (77.78%), Query Frame = 1 
Query:  229 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAAEVFKTISCAYEVLSNEVTRTKYDR 417
            D+Y+VLG+++ A+  +IK+AYR LA+KYHPDVSK+  A E FK +  AYEVLS++  R +YD+
Sbjct:    5 DYYEVLGLSKGASTDEIKKAYRRLAKKYHPDVSKEENAIEKFKEVQEAYEVLSDDQKRAQYDQ 67
[Close]
BLAST of FC923129 vs. ExPASy Swiss-Prot
Match: DNAJ_BACC2 (Chaperone protein dnaJ OS=Bacillus cereus (strain G9842) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.051e-13
Identity = 34/63 (53.97%), Postives = 49/63 (77.78%), Query Frame = 1 
Query:  229 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAAEVFKTISCAYEVLSNEVTRTKYDR 417
            D+Y+VLG+++ A+  +IK+AYR LA+KYHPDVSK+  A E FK +  AYEVLS++  R +YD+
Sbjct:    5 DYYEVLGLSKGASTDEIKKAYRRLAKKYHPDVSKEENAIEKFKEVQEAYEVLSDDQKRAQYDQ 67
[Close]
BLAST of FC923129 vs. ExPASy Swiss-Prot
Match: DNAJ_SYNP2 (Chaperone protein dnaJ OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.290e-13
Identity = 36/63 (57.14%), Postives = 46/63 (73.02%), Query Frame = 1 
Query:  229 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAAEVFKTISCAYEVLSNEVTRTKYDR 417
            D Y++LGV++     ++KRAYR LAR+YHPDV+KD  A E FK I+ AYEVLS   TR +YDR
Sbjct:    4 DFYEILGVSRDCGKDELKRAYRRLARQYHPDVNKDPGAEEKFKEINRAYEVLSEPETRARYDR 66
[Close]
BLAST of FC923129 vs. ExPASy Swiss-Prot
Match: DNAJ_STAES (Chaperone protein dnaJ OS=Staphylococcus epidermidis (strain ATCC 12228) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.290e-13
Identity = 36/63 (57.14%), Postives = 49/63 (77.78%), Query Frame = 1 
Query:  229 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAAEVFKTISCAYEVLSNEVTRTKYDR 417
            D+Y+VLGV +SA+  +IK+AYR L++KYHPD++K+  A E FK IS AYEVLS+E  R  YD+
Sbjct:    5 DYYEVLGVNKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDENKRANYDQ 67
The following BLAST results are available for this feature:
BLAST of FC923129 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 139
Match NameE-valueIdentityDescription
DNAJ_GLOVI3.102e-1357.14Chaperone protein dnaJ OS=Gloeobacter violaceus GN... [more]
DNAJ_GEOSW3.102e-1353.97Chaperone protein dnaJ OS=Geobacillus sp. (strain ... [more]
DNAJ_BACTR3.102e-1353.97Chaperone protein dnaJ OS=Bacillus thermoglucosida... [more]
DNAJ_GEOTN4.051e-1355.56Chaperone protein dnaJ OS=Geobacillus thermodenitr... [more]
DNAJ_GEOKA4.051e-1355.56Chaperone protein dnaJ OS=Geobacillus kaustophilus... [more]
DNAJ_BACCR4.051e-1353.97Chaperone protein dnaJ OS=Bacillus cereus (strain ... [more]
DNAJ_BACC44.051e-1353.97Chaperone protein dnaJ OS=Bacillus cereus (strain ... [more]
DNAJ_BACC24.051e-1353.97Chaperone protein dnaJ OS=Bacillus cereus (strain ... [more]
DNAJ_SYNP25.290e-1357.14Chaperone protein dnaJ OS=Synechococcus sp. (strai... [more]
DNAJ_STAES5.290e-1357.14Chaperone protein dnaJ OS=Staphylococcus epidermid... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31701D07EF StrClemenN Citrus clementina cDNA clone C31701D07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923129 ID=FC923129; Name=FC923129; organism=Citrus clementina; type=EST; length=699bp
GGAACAAATGCATGAACGATAATGCAGGCGCAGCTACTGGTGGGACCCAT
AACTCCCACCACCGGCTCCGATGCGTTCTCCTCCATCATCAAAAACAGTT
TCCTGATCTCCTCTCCTCGCCGCAGCACCACCGGCAGTAACCGCCACAGA
AGAACCCGCCACCGCTTGGTGGTCGCGTCATCGTCTTGGTCATCATCCGC
GGCGGCGGCGGCCATAAACGGCGAGCCGGACCATTACAAAGTTCTGGGCG
TCGCTCAAAGTGCCACGCTAGCTGATATAAAGAGGGCTTATCGCCTCCTC
GCTCGTAAGTATCATCCTGATGTTAGCAAGGATTCACGAGCGGCTGAAGT
GTTCAAGACCATCAGTTGTGCTTATGAAGTATTATCTAATGAAGTAACAA
GAACTAAGTATGATCGGGCACTCAAATTTCGAAATGATAGTGACAGATCA
CGTAGAGGAAACAGGAGGTACAGCAGTGAATTTGAAGACGGGGTAAGGAT
CTCTACATGGGCTGAACTGAGGCGAAAACTGCAATATGAGAGACATTGGA
AAAATTATAACTCANAAGAAGAGTATTCTTCCTTCTATCGTAAAGCACCA
GTCCGGGAAGTTCAAGAGGAAAACCCAGGTGATAAGAGAGGCTCCTTTAC
TGCAGTGCTAAGATCAGCATTTATCTCTTTATCTTACTGAANGTCTTTG
back to top