FC923129

Overview
NameFC923129
Unique NameFC923129
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length699
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC923129 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAM (Chaperone protein dnaJ OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=dnaJ PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.010e-12
Identity = 33/63 (52.38%), Postives = 49/63 (77.78%), Query Frame = 1 
Query:  229 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAAEVFKTISCAYEVLSNEVTRTKYDR 417
            D+Y+VLG+++ A+  +IK+AYR L++KYHPD++K+  A E FK IS AYEVLS++  R  YD+
Sbjct:    5 DYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQ 67
[Close]
BLAST of FC923129 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAE (Chaperone protein dnaJ OS=Staphylococcus aureus (strain Newman) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.010e-12
Identity = 33/63 (52.38%), Postives = 49/63 (77.78%), Query Frame = 1 
Query:  229 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAAEVFKTISCAYEVLSNEVTRTKYDR 417
            D+Y+VLG+++ A+  +IK+AYR L++KYHPD++K+  A E FK IS AYEVLS++  R  YD+
Sbjct:    5 DYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQ 67
[Close]
BLAST of FC923129 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAC (Chaperone protein dnaJ OS=Staphylococcus aureus (strain COL) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.010e-12
Identity = 33/63 (52.38%), Postives = 49/63 (77.78%), Query Frame = 1 
Query:  229 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAAEVFKTISCAYEVLSNEVTRTKYDR 417
            D+Y+VLG+++ A+  +IK+AYR L++KYHPD++K+  A E FK IS AYEVLS++  R  YD+
Sbjct:    5 DYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQ 67
[Close]
BLAST of FC923129 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAB (Chaperone protein dnaJ OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.010e-12
Identity = 33/63 (52.38%), Postives = 49/63 (77.78%), Query Frame = 1 
Query:  229 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAAEVFKTISCAYEVLSNEVTRTKYDR 417
            D+Y+VLG+++ A+  +IK+AYR L++KYHPD++K+  A E FK IS AYEVLS++  R  YD+
Sbjct:    5 DYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQ 67
[Close]
BLAST of FC923129 vs. ExPASy Swiss-Prot
Match: DNAJ_STAA9 (Chaperone protein dnaJ OS=Staphylococcus aureus (strain JH9) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.010e-12
Identity = 33/63 (52.38%), Postives = 49/63 (77.78%), Query Frame = 1 
Query:  229 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAAEVFKTISCAYEVLSNEVTRTKYDR 417
            D+Y+VLG+++ A+  +IK+AYR L++KYHPD++K+  A E FK IS AYEVLS++  R  YD+
Sbjct:    5 DYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQ 67
[Close]
BLAST of FC923129 vs. ExPASy Swiss-Prot
Match: DNAJ_STAA8 (Chaperone protein dnaJ OS=Staphylococcus aureus (strain NCTC 8325) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.010e-12
Identity = 33/63 (52.38%), Postives = 49/63 (77.78%), Query Frame = 1 
Query:  229 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAAEVFKTISCAYEVLSNEVTRTKYDR 417
            D+Y+VLG+++ A+  +IK+AYR L++KYHPD++K+  A E FK IS AYEVLS++  R  YD+
Sbjct:    5 DYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQ 67
[Close]
BLAST of FC923129 vs. ExPASy Swiss-Prot
Match: DNAJ_STAA3 (Chaperone protein dnaJ OS=Staphylococcus aureus (strain USA300) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.010e-12
Identity = 33/63 (52.38%), Postives = 49/63 (77.78%), Query Frame = 1 
Query:  229 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAAEVFKTISCAYEVLSNEVTRTKYDR 417
            D+Y+VLG+++ A+  +IK+AYR L++KYHPD++K+  A E FK IS AYEVLS++  R  YD+
Sbjct:    5 DYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQ 67
[Close]
BLAST of FC923129 vs. ExPASy Swiss-Prot
Match: DNAJ_STAA2 (Chaperone protein dnaJ OS=Staphylococcus aureus (strain JH1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.010e-12
Identity = 33/63 (52.38%), Postives = 49/63 (77.78%), Query Frame = 1 
Query:  229 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAAEVFKTISCAYEVLSNEVTRTKYDR 417
            D+Y+VLG+++ A+  +IK+AYR L++KYHPD++K+  A E FK IS AYEVLS++  R  YD+
Sbjct:    5 DYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQ 67
[Close]
BLAST of FC923129 vs. ExPASy Swiss-Prot
Match: DNAJ_STAA1 (Chaperone protein dnaJ OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.010e-12
Identity = 33/63 (52.38%), Postives = 49/63 (77.78%), Query Frame = 1 
Query:  229 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAAEVFKTISCAYEVLSNEVTRTKYDR 417
            D+Y+VLG+++ A+  +IK+AYR L++KYHPD++K+  A E FK IS AYEVLS++  R  YD+
Sbjct:    5 DYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQ 67
[Close]
BLAST of FC923129 vs. ExPASy Swiss-Prot
Match: DNAJ1_SYNY3 (Chaperone protein dnaJ 1 OS=Synechocystis sp. (strain PCC 6803) GN=dnaJ1 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.010e-12
Identity = 36/63 (57.14%), Postives = 45/63 (71.43%), Query Frame = 1 
Query:  229 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAAEVFKTISCAYEVLSNEVTRTKYDR 417
            D+Y+ LGV + A   +IKRAYR LARKYHPDV+K+  A E FK I+ AYEVLS    R +YD+
Sbjct:    4 DYYQTLGVTRDADKDEIKRAYRRLARKYHPDVNKEPGAEEKFKEINRAYEVLSEPEIRQRYDQ 66
The following BLAST results are available for this feature:
BLAST of FC923129 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 139
Match NameE-valueIdentityDescription
DNAJ_STAAM2.010e-1252.38Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAAE2.010e-1252.38Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAAC2.010e-1252.38Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAAB2.010e-1252.38Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAA92.010e-1252.38Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAA82.010e-1252.38Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAA32.010e-1252.38Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAA22.010e-1252.38Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAA12.010e-1252.38Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ1_SYNY32.010e-1257.14Chaperone protein dnaJ 1 OS=Synechocystis sp. (str... [more]

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Properties
Property NameValue
Genbank descriptionC31701D07EF StrClemenN Citrus clementina cDNA clone C31701D07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923129 ID=FC923129; Name=FC923129; organism=Citrus clementina; type=EST; length=699bp
GGAACAAATGCATGAACGATAATGCAGGCGCAGCTACTGGTGGGACCCAT
AACTCCCACCACCGGCTCCGATGCGTTCTCCTCCATCATCAAAAACAGTT
TCCTGATCTCCTCTCCTCGCCGCAGCACCACCGGCAGTAACCGCCACAGA
AGAACCCGCCACCGCTTGGTGGTCGCGTCATCGTCTTGGTCATCATCCGC
GGCGGCGGCGGCCATAAACGGCGAGCCGGACCATTACAAAGTTCTGGGCG
TCGCTCAAAGTGCCACGCTAGCTGATATAAAGAGGGCTTATCGCCTCCTC
GCTCGTAAGTATCATCCTGATGTTAGCAAGGATTCACGAGCGGCTGAAGT
GTTCAAGACCATCAGTTGTGCTTATGAAGTATTATCTAATGAAGTAACAA
GAACTAAGTATGATCGGGCACTCAAATTTCGAAATGATAGTGACAGATCA
CGTAGAGGAAACAGGAGGTACAGCAGTGAATTTGAAGACGGGGTAAGGAT
CTCTACATGGGCTGAACTGAGGCGAAAACTGCAATATGAGAGACATTGGA
AAAATTATAACTCANAAGAAGAGTATTCTTCCTTCTATCGTAAAGCACCA
GTCCGGGAAGTTCAAGAGGAAAACCCAGGTGATAAGAGAGGCTCCTTTAC
TGCAGTGCTAAGATCAGCATTTATCTCTTTATCTTACTGAANGTCTTTG
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