FC923129

Overview
NameFC923129
Unique NameFC923129
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length699
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923129 vs. ExPASy Swiss-Prot
Match: DNAJ_MACCJ (Chaperone protein dnaJ OS=Macrococcus caseolyticus (strain JCSC5402) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.977e-12
Identity = 30/63 (47.62%), Postives = 51/63 (80.95%), Query Frame = 1
Query:  229 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAAEVFKTISCAYEVLSNEVTRTKYDR 417
            D+Y+VLG+++ A+  +IKRAY+ L++KYHPD++K++ A + FK I+ AYEVLS++  + +YD+
Sbjct:    5 DYYEVLGLSKGASKEEIKRAYKKLSKKYHPDINKEADAEDKFKEIAEAYEVLSDDQKKAQYDQ 67          
BLAST of FC923129 vs. ExPASy Swiss-Prot
Match: DNAJ_ENTFA (Chaperone protein dnaJ OS=Enterococcus faecalis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.977e-12
Identity = 32/63 (50.79%), Postives = 49/63 (77.78%), Query Frame = 1
Query:  229 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAAEVFKTISCAYEVLSNEVTRTKYDR 417
            D+Y+VLG+A+ A+  +IK+AYR L++KYHPD++K++ A E FK +S AYEVLS+   +  YD+
Sbjct:    6 DYYEVLGLAKGASDDEIKKAYRKLSKKYHPDINKEADAEEKFKEVSEAYEVLSDPQKKAAYDQ 68          
BLAST of FC923129 vs. ExPASy Swiss-Prot
Match: DNAJ_BRECH (Chaperone protein dnaJ OS=Brevibacillus choshinensis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.977e-12
Identity = 34/63 (53.97%), Postives = 45/63 (71.43%), Query Frame = 1
Query:  229 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAAEVFKTISCAYEVLSNEVTRTKYDR 417
            D+Y+VLGV + A   +IK+AYR LAR+YHPDV+K + A E FK +  AY+VLS    R +YDR
Sbjct:    4 DYYEVLGVGKGADADEIKKAYRKLARQYHPDVNKAADAEEKFKEVKEAYDVLSEPQKRAQYDR 66          
BLAST of FC923129 vs. ExPASy Swiss-Prot
Match: DNAJ_BACSU (Chaperone protein dnaJ OS=Bacillus subtilis GN=dnaJ PE=2 SV=3)

HSP 1 Score: 70.4774 bits (171), Expect = 9.977e-12
Identity = 31/63 (49.21%), Postives = 49/63 (77.78%), Query Frame = 1
Query:  229 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAAEVFKTISCAYEVLSNEVTRTKYDR 417
            D+Y+VLGV++SA+  +IK+AYR L++KYHPD++K++ + E FK +  AYE LS++  R  YD+
Sbjct:    5 DYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEAGSDEKFKEVKEAYETLSDDQKRAHYDQ 67          
BLAST of FC923129 vs. ExPASy Swiss-Prot
Match: CBPA_PSEE4 (Curved DNA-binding protein OS=Pseudomonas entomophila (strain L48) GN=cbpA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.977e-12
Identity = 36/67 (53.73%), Postives = 45/67 (67.16%), Query Frame = 1
Query:  229 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAAEVFKTISCAYEVLSNEVTRTKYDRALKF 429
            D+YK+LGV  SA    IK AYR LARKYHPDVSK+  A + FK  + AYEVL ++  R +YD   K+
Sbjct:    5 DYYKILGVEASADEKAIKAAYRKLARKYHPDVSKERDAEDKFKEANEAYEVLGDKDKRAEYDEIRKY 71          
BLAST of FC923129 vs. ExPASy Swiss-Prot
Match: DNJA3_MOUSE (DnaJ homolog subfamily A member 3, mitochondrial OS=Mus musculus GN=Dnaja3 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.303e-11
Identity = 34/63 (53.97%), Postives = 48/63 (76.19%), Query Frame = 1
Query:  229 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDS-RAAEVFKTISCAYEVLSNEVTRTKYD 414
            D+Y++LGV ++A+  DIK+AY  LA+KYHPD +KD  +A E F  ++ AYEVLS+EV R +YD
Sbjct:   93 DYYQILGVPRNASQKDIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYD 155          
BLAST of FC923129 vs. ExPASy Swiss-Prot
Match: DNAJ_PROMM (Chaperone protein dnaJ OS=Prochlorococcus marinus (strain MIT 9313) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.303e-11
Identity = 34/63 (53.97%), Postives = 46/63 (73.02%), Query Frame = 1
Query:  229 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAAEVFKTISCAYEVLSNEVTRTKYDR 417
            D+Y +LGV++ A    +KRAYR LAR+YHPD++KD  A + FK I  AYEVLS+  TR +YD+
Sbjct:    3 DYYDLLGVSKDADGDTLKRAYRRLARQYHPDINKDPGAEDRFKEIGRAYEVLSDPQTRGRYDQ 65          
BLAST of FC923129 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLTE (Chaperone protein dnaJ OS=Chlorobium tepidum GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.303e-11
Identity = 35/64 (54.69%), Postives = 49/64 (76.56%), Query Frame = 1
Query:  229 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSR-AAEVFKTISCAYEVLSNEVTRTKYDR 417
            D+Y++LGVA+SA   +IK+AYR LA KYHPD + D++ A E FK ++ AYEVLSN+  R +YD+
Sbjct:    4 DYYEILGVARSADKDEIKKAYRKLALKYHPDKNPDNKEAEEKFKEVNEAYEVLSNDDKRRRYDQ 67          
BLAST of FC923129 vs. ExPASy Swiss-Prot
Match: DNAJ_ACHLA (Chaperone protein dnaJ OS=Acholeplasma laidlawii GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.303e-11
Identity = 32/63 (50.79%), Postives = 47/63 (74.60%), Query Frame = 1
Query:  229 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAAEVFKTISCAYEVLSNEVTRTKYDR 417
            D+Y VLG+++SA+  +IK+AYR LA+KYHPDVSK+  A   FK +  AY+VL++   + +YDR
Sbjct:    5 DYYDVLGISKSASQDEIKKAYRSLAKKYHPDVSKEKDAETKFKEVQEAYDVLNDSNKKAQYDR 67          
BLAST of FC923129 vs. ExPASy Swiss-Prot
Match: DNAJ_ACAM1 (Chaperone protein dnaJ OS=Acaryochloris marina (strain MBIC 11017) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.303e-11
Identity = 33/63 (52.38%), Postives = 47/63 (74.60%), Query Frame = 1
Query:  229 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAAEVFKTISCAYEVLSNEVTRTKYDR 417
            D+Y +LGV++SA   ++KR+YR LARKYHPDV+K+  A + FK I+ AYE LS+   R +YD+
Sbjct:    4 DYYDILGVSRSADPDELKRSYRRLARKYHPDVNKEPGAEDKFKEINKAYETLSDPQMRGRYDQ 66          
The following BLAST results are available for this feature:
BLAST of FC923129 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 139
Match NameE-valueIdentityDescription
DNAJ_MACCJ9.977e-1247.62Chaperone protein dnaJ OS=Macrococcus caseolyticus... [more]
DNAJ_ENTFA9.977e-1250.79Chaperone protein dnaJ OS=Enterococcus faecalis GN... [more]
DNAJ_BRECH9.977e-1253.97Chaperone protein dnaJ OS=Brevibacillus choshinens... [more]
DNAJ_BACSU9.977e-1249.21Chaperone protein dnaJ OS=Bacillus subtilis GN=dna... [more]
CBPA_PSEE49.977e-1253.73Curved DNA-binding protein OS=Pseudomonas entomoph... [more]
DNJA3_MOUSE1.303e-1153.97DnaJ homolog subfamily A member 3, mitochondrial O... [more]
DNAJ_PROMM1.303e-1153.97Chaperone protein dnaJ OS=Prochlorococcus marinus ... [more]
DNAJ_CHLTE1.303e-1154.69Chaperone protein dnaJ OS=Chlorobium tepidum GN=dn... [more]
DNAJ_ACHLA1.303e-1150.79Chaperone protein dnaJ OS=Acholeplasma laidlawii G... [more]
DNAJ_ACAM11.303e-1152.38Chaperone protein dnaJ OS=Acaryochloris marina (st... [more]

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Properties
Property NameValue
Genbank descriptionC31701D07EF StrClemenN Citrus clementina cDNA clone C31701D07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923129 ID=FC923129; Name=FC923129; organism=Citrus clementina; type=EST; length=699bp
GGAACAAATGCATGAACGATAATGCAGGCGCAGCTACTGGTGGGACCCAT
AACTCCCACCACCGGCTCCGATGCGTTCTCCTCCATCATCAAAAACAGTT
TCCTGATCTCCTCTCCTCGCCGCAGCACCACCGGCAGTAACCGCCACAGA
AGAACCCGCCACCGCTTGGTGGTCGCGTCATCGTCTTGGTCATCATCCGC
GGCGGCGGCGGCCATAAACGGCGAGCCGGACCATTACAAAGTTCTGGGCG
TCGCTCAAAGTGCCACGCTAGCTGATATAAAGAGGGCTTATCGCCTCCTC
GCTCGTAAGTATCATCCTGATGTTAGCAAGGATTCACGAGCGGCTGAAGT
GTTCAAGACCATCAGTTGTGCTTATGAAGTATTATCTAATGAAGTAACAA
GAACTAAGTATGATCGGGCACTCAAATTTCGAAATGATAGTGACAGATCA
CGTAGAGGAAACAGGAGGTACAGCAGTGAATTTGAAGACGGGGTAAGGAT
CTCTACATGGGCTGAACTGAGGCGAAAACTGCAATATGAGAGACATTGGA
AAAATTATAACTCANAAGAAGAGTATTCTTCCTTCTATCGTAAAGCACCA
GTCCGGGAAGTTCAAGAGGAAAACCCAGGTGATAAGAGAGGCTCCTTTAC
TGCAGTGCTAAGATCAGCATTTATCTCTTTATCTTACTGAANGTCTTTG
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