FC923133

Overview
NameFC923133
Unique NameFC923133
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9232 contig Ccv1_Contig9232:610..1319. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923133 vs. ExPASy Swiss-Prot
Match: RL11_PETMO (50S ribosomal protein L11 OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=rplK PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.257e-43
Identity = 84/133 (63.16%), Postives = 111/133 (83.46%), Query Frame = 1
Query:  253 LIKLALEAGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQQVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDID 651
            ++KL LEAGKATPAPPVGPALG  GVN+M FCK +NA TAD+AG ++PVEI+V++DRSFTFI+KTPPAS L+ KAAG++ G+K+P ++ VGKI  +QLR IA  K+ DLN   +++AM+IIAGTA +MGI+I+
Sbjct:    8 VVKLQLEAGKATPAPPVGPALGQYGVNLMEFCKKFNAATADQAGTLLPVEISVFEDRSFTFIVKTPPASFLVKKAAGLKSGAKEPSKEVVGKIKRKQLREIAETKMQDLNAKDLDAAMKIIAGTARSMGIEIE 140          
BLAST of FC923133 vs. ExPASy Swiss-Prot
Match: RL11_THEM4 (50S ribosomal protein L11 OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=rplK PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.948e-43
Identity = 86/131 (65.65%), Postives = 106/131 (80.92%), Query Frame = 1
Query:  256 IKLALEAGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQQVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 648
            ++L LEAGKATPAPPVGPALG +GVN+M FCK +NA TADKAG +IPV ITVY+DRSFTFI KTPPAS LL KAA +  GS++PK++ VGK+T EQ++ IA  K  DLN   IE+AM+II GTA +MGI++
Sbjct:    9 VRLQLEAGKATPAPPVGPALGQRGVNLMEFCKKFNAATADKAGMIIPVIITVYEDRSFTFITKTPPASFLLKKAAKLNSGSQEPKRKIVGKVTREQIKEIAEIKKEDLNANDIEAAMKIIEGTAKSMGIEV 139          
BLAST of FC923133 vs. ExPASy Swiss-Prot
Match: RL11_CARHZ (50S ribosomal protein L11 OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=rplK PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.948e-43
Identity = 85/132 (64.39%), Postives = 106/132 (80.30%), Query Frame = 1
Query:  253 LIKLALEAGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQQVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 648
            ++KL + AGKATPAPPVGPALG  GVNIMAF K+YN RTA +AG +IPVEITVY+DRSFTF+ KTPPAS LL KAAG+E GS  P +++VGK+T  ++R IA  KL DLN   +E+AMR+I GTA +MGI++
Sbjct:    8 VVKLQIPAGKATPAPPVGPALGQHGVNIMAFVKEYNERTAQQAGMIIPVEITVYEDRSFTFVTKTPPASDLLKKAAGIESGSGQPNKKKVGKVTRAKIREIAELKLKDLNANDVEAAMRMIEGTARSMGIEV 139          
BLAST of FC923133 vs. ExPASy Swiss-Prot
Match: RL11_BACWK (50S ribosomal protein L11 OS=Bacillus weihenstephanensis (strain KBAB4) GN=rplK PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.948e-43
Identity = 82/133 (61.65%), Postives = 107/133 (80.45%), Query Frame = 1
Query:  253 LIKLALEAGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQQVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDID 651
            ++KL + AGKA PAPPVGPALG  GVNIM FCK++NARTAD+AG +IPVEITV++DRSFTFI KTPPA+VLL K AG+E GS +P + +V  +  +++R IA  K+PDLN  S+E+AMR++ GTA +MGI I+
Sbjct:    8 MVKLQIPAGKANPAPPVGPALGQAGVNIMGFCKEFNARTADQAGLIIPVEITVFEDRSFTFITKTPPAAVLLKKVAGIESGSGEPNRNKVATVKRDKVREIAETKMPDLNAASVEAAMRMVEGTARSMGIVIE 140          
BLAST of FC923133 vs. ExPASy Swiss-Prot
Match: RL11_BACHK (50S ribosomal protein L11 OS=Bacillus thuringiensis subsp. konkukian GN=rplK PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.948e-43
Identity = 82/133 (61.65%), Postives = 107/133 (80.45%), Query Frame = 1
Query:  253 LIKLALEAGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQQVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDID 651
            ++KL + AGKA PAPPVGPALG  GVNIM FCK++NARTAD+AG +IPVEITV++DRSFTFI KTPPA+VLL K AG+E GS +P + +V  +  +++R IA  K+PDLN  S+E+AMR++ GTA +MGI I+
Sbjct:    8 MVKLQIPAGKANPAPPVGPALGQAGVNIMGFCKEFNARTADQAGLIIPVEITVFEDRSFTFITKTPPAAVLLKKVAGIESGSGEPNRNKVATVKRDKVREIAETKMPDLNAASVEAAMRMVEGTARSMGIVIE 140          
BLAST of FC923133 vs. ExPASy Swiss-Prot
Match: RL11_BACCZ (50S ribosomal protein L11 OS=Bacillus cereus (strain ZK / E33L) GN=rplK PE=3 SV=2)

HSP 1 Score: 175.252 bits (443), Expect = 2.948e-43
Identity = 82/133 (61.65%), Postives = 107/133 (80.45%), Query Frame = 1
Query:  253 LIKLALEAGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQQVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDID 651
            ++KL + AGKA PAPPVGPALG  GVNIM FCK++NARTAD+AG +IPVEITV++DRSFTFI KTPPA+VLL K AG+E GS +P + +V  +  +++R IA  K+PDLN  S+E+AMR++ GTA +MGI I+
Sbjct:    8 MVKLQIPAGKANPAPPVGPALGQAGVNIMGFCKEFNARTADQAGLIIPVEITVFEDRSFTFITKTPPAAVLLKKVAGIESGSGEPNRNKVATVKRDKVREIAETKMPDLNAASVEAAMRMVEGTARSMGIVIE 140          
BLAST of FC923133 vs. ExPASy Swiss-Prot
Match: RL11_BACCN (50S ribosomal protein L11 OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=rplK PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.948e-43
Identity = 82/133 (61.65%), Postives = 107/133 (80.45%), Query Frame = 1
Query:  253 LIKLALEAGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQQVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDID 651
            ++KL + AGKA PAPPVGPALG  GVNIM FCK++NARTAD+AG +IPVEITV++DRSFTFI KTPPA+VLL K AG+E GS +P + +V  +  +++R IA  K+PDLN  S+E+AMR++ GTA +MGI I+
Sbjct:    8 MVKLQIPAGKANPAPPVGPALGQAGVNIMGFCKEFNARTADQAGLIIPVEITVFEDRSFTFITKTPPAAVLLKKVAGIESGSGEPNRNKVATVKRDKVREIAETKMPDLNAASVEAAMRMVEGTARSMGIVIE 140          
BLAST of FC923133 vs. ExPASy Swiss-Prot
Match: RL11_BACC7 (50S ribosomal protein L11 OS=Bacillus cereus (strain AH187) GN=rplK PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.948e-43
Identity = 82/133 (61.65%), Postives = 107/133 (80.45%), Query Frame = 1
Query:  253 LIKLALEAGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQQVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDID 651
            ++KL + AGKA PAPPVGPALG  GVNIM FCK++NARTAD+AG +IPVEITV++DRSFTFI KTPPA+VLL K AG+E GS +P + +V  +  +++R IA  K+PDLN  S+E+AMR++ GTA +MGI I+
Sbjct:    8 MVKLQIPAGKANPAPPVGPALGQAGVNIMGFCKEFNARTADQAGLIIPVEITVFEDRSFTFITKTPPAAVLLKKVAGIESGSGEPNRNKVATVKRDKVREIAETKMPDLNAASVEAAMRMVEGTARSMGIVIE 140          
BLAST of FC923133 vs. ExPASy Swiss-Prot
Match: RL11_BACC4 (50S ribosomal protein L11 OS=Bacillus cereus (strain B4264) GN=rplK PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.948e-43
Identity = 82/133 (61.65%), Postives = 107/133 (80.45%), Query Frame = 1
Query:  253 LIKLALEAGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQQVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDID 651
            ++KL + AGKA PAPPVGPALG  GVNIM FCK++NARTAD+AG +IPVEITV++DRSFTFI KTPPA+VLL K AG+E GS +P + +V  +  +++R IA  K+PDLN  S+E+AMR++ GTA +MGI I+
Sbjct:    8 MVKLQIPAGKANPAPPVGPALGQAGVNIMGFCKEFNARTADQAGLIIPVEITVFEDRSFTFITKTPPAAVLLKKVAGIESGSGEPNRNKVATVKRDKVREIAETKMPDLNAASVEAAMRMVEGTARSMGIVIE 140          
BLAST of FC923133 vs. ExPASy Swiss-Prot
Match: RL11_BACC3 (50S ribosomal protein L11 OS=Bacillus cereus (strain 03BB102) GN=rplK PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.948e-43
Identity = 82/133 (61.65%), Postives = 107/133 (80.45%), Query Frame = 1
Query:  253 LIKLALEAGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQQVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDID 651
            ++KL + AGKA PAPPVGPALG  GVNIM FCK++NARTAD+AG +IPVEITV++DRSFTFI KTPPA+VLL K AG+E GS +P + +V  +  +++R IA  K+PDLN  S+E+AMR++ GTA +MGI I+
Sbjct:    8 MVKLQIPAGKANPAPPVGPALGQAGVNIMGFCKEFNARTADQAGLIIPVEITVFEDRSFTFITKTPPAAVLLKKVAGIESGSGEPNRNKVATVKRDKVREIAETKMPDLNAASVEAAMRMVEGTARSMGIVIE 140          
The following BLAST results are available for this feature:
BLAST of FC923133 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RL11_PETMO2.257e-4363.1650S ribosomal protein L11 OS=Petrotoga mobilis (st... [more]
RL11_THEM42.948e-4365.6550S ribosomal protein L11 OS=Thermosipho melanesie... [more]
RL11_CARHZ2.948e-4364.3950S ribosomal protein L11 OS=Carboxydothermus hydr... [more]
RL11_BACWK2.948e-4361.6550S ribosomal protein L11 OS=Bacillus weihenstepha... [more]
RL11_BACHK2.948e-4361.6550S ribosomal protein L11 OS=Bacillus thuringiensi... [more]
RL11_BACCZ2.948e-4361.6550S ribosomal protein L11 OS=Bacillus cereus (stra... [more]
RL11_BACCN2.948e-4361.6550S ribosomal protein L11 OS=Bacillus cereus subsp... [more]
RL11_BACC72.948e-4361.6550S ribosomal protein L11 OS=Bacillus cereus (stra... [more]
RL11_BACC42.948e-4361.6550S ribosomal protein L11 OS=Bacillus cereus (stra... [more]
RL11_BACC32.948e-4361.6550S ribosomal protein L11 OS=Bacillus cereus (stra... [more]

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Properties
Property NameValue
Genbank descriptionC31701D11EF StrClemenN Citrus clementina cDNA clone C31701D11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923133 ID=FC923133; Name=FC923133; organism=Citrus clementina; type=EST; length=710bp
GAGTGGATTCGAGGTTCAATGGCTTCCTCTCTATCCACTTCAACGAGTCT
TCAAAATGCTAGTCAGCAGCTTTCGTGCTCTTTATTTCCTTCAGCCATCA
ACTTATCCTCAAACTCTAATGTCTCCCTCCCATTTTACGACAATAAAGTT
AAACCATCCCCACTCCTCTCTTCAACTCCAAGATTTCTCACTGTCATTGC
CATGGCTCCTCCTAAACCCGGTGGCAAAGCCAAAGCCAAGAAAGTGGTGG
GTTTGATAAAGCTGGCTCTAGAGGCAGGAAAGGCCACACCTGCGCCGCCC
GTGGGGCCAGCCCTTGGTGCTAAGGGTGTAAATATCATGGCTTTTTGTAA
GGATTATAATGCTAGAACTGCTGATAAAGCCGGTTACGTTATTCCAGTCG
AAATTACCGTTTACGATGATAGGAGCTTCACTTTTATTCTTAAGACGCCG
CCCGCGTCAGTTTTGCTCCTTAAGGCTGCTGGGGTGGAGAAGGGTTCAAA
AGATCCAAAGCAACAGCAAGTGGGGAAGATCACCATTGAACAATTGCGGG
CCATTGCCACGGAAAAGCTTCCAGATTTGAATTGCACTTCTATTGAATCA
GCAATGAGAATTATAGCAGGTACTGCGGCTAACATGGGTATTGATATTGA
CCCTCCAGTTCTTGAGACCAAAAGAANGACTTTGATTATTCATTGTTGCC
TTGATTTGCT
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