FC923133

Overview
NameFC923133
Unique NameFC923133
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9232 contig Ccv1_Contig9232:610..1319. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC923133 vs. ExPASy Swiss-Prot
Match: RL11_BACC2 (50S ribosomal protein L11 OS=Bacillus cereus (strain G9842) GN=rplK PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.948e-43
Identity = 82/133 (61.65%), Postives = 107/133 (80.45%), Query Frame = 1 
Query:  253 LIKLALEAGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQQVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDID 651
            ++KL + AGKA PAPPVGPALG  GVNIM FCK++NARTAD+AG +IPVEITV++DRSFTFI KTPPA+VLL K AG+E GS +P + +V  +  +++R IA  K+PDLN  S+E+AMR++ GTA +MGI I+
Sbjct:    8 MVKLQIPAGKANPAPPVGPALGQAGVNIMGFCKEFNARTADQAGLIIPVEITVFEDRSFTFITKTPPAAVLLKKVAGIESGSGEPNRNKVATVKRDKVREIAETKMPDLNAASVEAAMRMVEGTARSMGIVIE 140
[Close]
BLAST of FC923133 vs. ExPASy Swiss-Prot
Match: RL11_BACC1 (50S ribosomal protein L11 OS=Bacillus cereus (strain ATCC 10987) GN=rplK PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.948e-43
Identity = 82/133 (61.65%), Postives = 107/133 (80.45%), Query Frame = 1 
Query:  253 LIKLALEAGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQQVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDID 651
            ++KL + AGKA PAPPVGPALG  GVNIM FCK++NARTAD+AG +IPVEITV++DRSFTFI KTPPA+VLL K AG+E GS +P + +V  +  +++R IA  K+PDLN  S+E+AMR++ GTA +MGI I+
Sbjct:    8 MVKLQIPAGKANPAPPVGPALGQAGVNIMGFCKEFNARTADQAGLIIPVEITVFEDRSFTFITKTPPAAVLLKKVAGIESGSGEPNRNKVATVKRDKVREIAETKMPDLNAASVEAAMRMVEGTARSMGIVIE 140
[Close]
BLAST of FC923133 vs. ExPASy Swiss-Prot
Match: RL11_BACC0 (50S ribosomal protein L11 OS=Bacillus cereus (strain AH820) GN=rplK PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.948e-43
Identity = 82/133 (61.65%), Postives = 107/133 (80.45%), Query Frame = 1 
Query:  253 LIKLALEAGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQQVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDID 651
            ++KL + AGKA PAPPVGPALG  GVNIM FCK++NARTAD+AG +IPVEITV++DRSFTFI KTPPA+VLL K AG+E GS +P + +V  +  +++R IA  K+PDLN  S+E+AMR++ GTA +MGI I+
Sbjct:    8 MVKLQIPAGKANPAPPVGPALGQAGVNIMGFCKEFNARTADQAGLIIPVEITVFEDRSFTFITKTPPAAVLLKKVAGIESGSGEPNRNKVATVKRDKVREIAETKMPDLNAASVEAAMRMVEGTARSMGIVIE 140
[Close]
BLAST of FC923133 vs. ExPASy Swiss-Prot
Match: RL11_BACAN (50S ribosomal protein L11 OS=Bacillus anthracis GN=rplK PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.948e-43
Identity = 82/133 (61.65%), Postives = 107/133 (80.45%), Query Frame = 1 
Query:  253 LIKLALEAGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQQVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDID 651
            ++KL + AGKA PAPPVGPALG  GVNIM FCK++NARTAD+AG +IPVEITV++DRSFTFI KTPPA+VLL K AG+E GS +P + +V  +  +++R IA  K+PDLN  S+E+AMR++ GTA +MGI I+
Sbjct:    8 MVKLQIPAGKANPAPPVGPALGQAGVNIMGFCKEFNARTADQAGLIIPVEITVFEDRSFTFITKTPPAAVLLKKVAGIESGSGEPNRNKVATVKRDKVREIAETKMPDLNAASVEAAMRMVEGTARSMGIVIE 140
[Close]
BLAST of FC923133 vs. ExPASy Swiss-Prot
Match: RL11_BACAC (50S ribosomal protein L11 OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=rplK PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.948e-43
Identity = 82/133 (61.65%), Postives = 107/133 (80.45%), Query Frame = 1 
Query:  253 LIKLALEAGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQQVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDID 651
            ++KL + AGKA PAPPVGPALG  GVNIM FCK++NARTAD+AG +IPVEITV++DRSFTFI KTPPA+VLL K AG+E GS +P + +V  +  +++R IA  K+PDLN  S+E+AMR++ GTA +MGI I+
Sbjct:    8 MVKLQIPAGKANPAPPVGPALGQAGVNIMGFCKEFNARTADQAGLIIPVEITVFEDRSFTFITKTPPAAVLLKKVAGIESGSGEPNRNKVATVKRDKVREIAETKMPDLNAASVEAAMRMVEGTARSMGIVIE 140
[Close]
BLAST of FC923133 vs. ExPASy Swiss-Prot
Match: RL11_BACAA (50S ribosomal protein L11 OS=Bacillus anthracis (strain A0248) GN=rplK PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.948e-43
Identity = 82/133 (61.65%), Postives = 107/133 (80.45%), Query Frame = 1 
Query:  253 LIKLALEAGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQQVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDID 651
            ++KL + AGKA PAPPVGPALG  GVNIM FCK++NARTAD+AG +IPVEITV++DRSFTFI KTPPA+VLL K AG+E GS +P + +V  +  +++R IA  K+PDLN  S+E+AMR++ GTA +MGI I+
Sbjct:    8 MVKLQIPAGKANPAPPVGPALGQAGVNIMGFCKEFNARTADQAGLIIPVEITVFEDRSFTFITKTPPAAVLLKKVAGIESGSGEPNRNKVATVKRDKVREIAETKMPDLNAASVEAAMRMVEGTARSMGIVIE 140
[Close]
BLAST of FC923133 vs. ExPASy Swiss-Prot
Match: RL11_STRAT (50S ribosomal protein L11 OS=Streptomyces antibioticus GN=rplK PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.850e-43
Identity = 84/133 (63.16%), Postives = 106/133 (79.70%), Query Frame = 1 
Query:  253 LIKLALEAGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQQVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDID 651
            LIKL ++AG A PAPPVGPALG  GVNIM FC+ YNA T  + G+VIPVEITVY+DRSFTFI KTPPA+ ++LKAAG+EKGS +P + +V KIT  Q+R IAT KLPDLN   +++A +IIAGTA +MG+ ++
Sbjct:   11 LIKLQIQAGAANPAPPVGPALGQHGVNIMEFCRAYNAATESQRGWVIPVEITVYEDRSFTFITKTPPAAKMILKAAGIEKGSGEPHKTKVAKITEAQVREIATTKLPDLNANDLDAAAKIIAGTARSMGVTVE 143
[Close]
BLAST of FC923133 vs. ExPASy Swiss-Prot
Match: RL11_BACSU (50S ribosomal protein L11 OS=Bacillus subtilis GN=rplK PE=3 SV=3)

HSP 1 Score: 174.866 bits (442), Expect = 3.850e-43
Identity = 82/133 (61.65%), Postives = 107/133 (80.45%), Query Frame = 1 
Query:  253 LIKLALEAGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQQVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDID 651
            ++KL + AGKA PAPPVGPALG  GVNIM FCK++NARTAD+AG +IPVEI+VY+DRSFTFI KTPPA+VLL KAAG+E GS +P + +V  +  +++R IA  K+PDLN   +E+AMR++ GTA +MGI I+
Sbjct:    8 VVKLQIPAGKANPAPPVGPALGQAGVNIMGFCKEFNARTADQAGLIIPVEISVYEDRSFTFITKTPPAAVLLKKAAGIESGSGEPNRNKVATVKRDKVREIAETKMPDLNAADVEAAMRMVEGTARSMGIVIE 140
[Close]
BLAST of FC923133 vs. ExPASy Swiss-Prot
Match: RL11_BACA2 (50S ribosomal protein L11 OS=Bacillus amyloliquefaciens (strain FZB42) GN=rplK PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.850e-43
Identity = 82/133 (61.65%), Postives = 107/133 (80.45%), Query Frame = 1 
Query:  253 LIKLALEAGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQQVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDID 651
            ++KL + AGKA PAPPVGPALG  GVNIM FCK++NARTAD+AG +IPVEI+VY+DRSFTFI KTPPA+VLL KAAG+E GS +P + +V  +  +++R IA  K+PDLN   +E+AMR++ GTA +MGI I+
Sbjct:    8 VVKLQIPAGKANPAPPVGPALGQAGVNIMGFCKEFNARTADQAGLIIPVEISVYEDRSFTFITKTPPAAVLLKKAAGIESGSGEPNRNKVATVKRDKVREIAETKMPDLNAADVEAAMRMVEGTARSMGIVIE 140
[Close]
BLAST of FC923133 vs. ExPASy Swiss-Prot
Match: RL11A_BACCR (50S ribosomal protein L11-1 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=rplK1 PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.850e-43
Identity = 82/133 (61.65%), Postives = 107/133 (80.45%), Query Frame = 1 
Query:  253 LIKLALEAGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQQVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDID 651
            ++KL + AGKA PAPPVGPALG  GVNIM FCK++NARTAD+AG +IPVEITV++DRSFTFI KTPPA+VLL KAAG+E GS +P + +V  +  +++R IA  K+PDLN  S+E+AMR++ G A +MGI I+
Sbjct:    8 MVKLQIPAGKANPAPPVGPALGQAGVNIMGFCKEFNARTADQAGLIIPVEITVFEDRSFTFITKTPPAAVLLKKAAGIESGSGEPNRNKVATVKRDKVREIAETKMPDLNAASVEAAMRMVEGAARSMGIVIE 140
The following BLAST results are available for this feature:
BLAST of FC923133 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RL11_BACC22.948e-4361.6550S ribosomal protein L11 OS=Bacillus cereus (stra... [more]
RL11_BACC12.948e-4361.6550S ribosomal protein L11 OS=Bacillus cereus (stra... [more]
RL11_BACC02.948e-4361.6550S ribosomal protein L11 OS=Bacillus cereus (stra... [more]
RL11_BACAN2.948e-4361.6550S ribosomal protein L11 OS=Bacillus anthracis GN... [more]
RL11_BACAC2.948e-4361.6550S ribosomal protein L11 OS=Bacillus anthracis (s... [more]
RL11_BACAA2.948e-4361.6550S ribosomal protein L11 OS=Bacillus anthracis (s... [more]
RL11_STRAT3.850e-4363.1650S ribosomal protein L11 OS=Streptomyces antibiot... [more]
RL11_BACSU3.850e-4361.6550S ribosomal protein L11 OS=Bacillus subtilis GN=... [more]
RL11_BACA23.850e-4361.6550S ribosomal protein L11 OS=Bacillus amyloliquefa... [more]
RL11A_BACCR3.850e-4361.6550S ribosomal protein L11-1 OS=Bacillus cereus (st... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31701D11EF StrClemenN Citrus clementina cDNA clone C31701D11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923133 ID=FC923133; Name=FC923133; organism=Citrus clementina; type=EST; length=710bp
GAGTGGATTCGAGGTTCAATGGCTTCCTCTCTATCCACTTCAACGAGTCT
TCAAAATGCTAGTCAGCAGCTTTCGTGCTCTTTATTTCCTTCAGCCATCA
ACTTATCCTCAAACTCTAATGTCTCCCTCCCATTTTACGACAATAAAGTT
AAACCATCCCCACTCCTCTCTTCAACTCCAAGATTTCTCACTGTCATTGC
CATGGCTCCTCCTAAACCCGGTGGCAAAGCCAAAGCCAAGAAAGTGGTGG
GTTTGATAAAGCTGGCTCTAGAGGCAGGAAAGGCCACACCTGCGCCGCCC
GTGGGGCCAGCCCTTGGTGCTAAGGGTGTAAATATCATGGCTTTTTGTAA
GGATTATAATGCTAGAACTGCTGATAAAGCCGGTTACGTTATTCCAGTCG
AAATTACCGTTTACGATGATAGGAGCTTCACTTTTATTCTTAAGACGCCG
CCCGCGTCAGTTTTGCTCCTTAAGGCTGCTGGGGTGGAGAAGGGTTCAAA
AGATCCAAAGCAACAGCAAGTGGGGAAGATCACCATTGAACAATTGCGGG
CCATTGCCACGGAAAAGCTTCCAGATTTGAATTGCACTTCTATTGAATCA
GCAATGAGAATTATAGCAGGTACTGCGGCTAACATGGGTATTGATATTGA
CCCTCCAGTTCTTGAGACCAAAAGAANGACTTTGATTATTCATTGTTGCC
TTGATTTGCT
back to top