FC923139
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: RB11A_CHICK (Ras-related protein Rab-11A OS=Gallus gallus GN=RAB11A PE=2 SV=1) HSP 1 Score: 290.041 bits (741), Expect = 8.976e-78 Identity = 142/177 (80.23%), Postives = 161/177 (90.96%), Query Frame = 3 Query: 117 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL 647 DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGNK+DLRHLRAV T++A AFAE+ F+ETSAL+S NVE AF +LT+IYR+VS+K + Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 181
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: RB11A_CANFA (Ras-related protein Rab-11A OS=Canis familiaris GN=RAB11A PE=2 SV=3) HSP 1 Score: 290.041 bits (741), Expect = 8.976e-78 Identity = 142/177 (80.23%), Postives = 161/177 (90.96%), Query Frame = 3 Query: 117 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL 647 DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGNK+DLRHLRAV T++A AFAE+ F+ETSAL+S NVE AF +LT+IYR+VS+K + Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 181
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: RB11A_BOVIN (Ras-related protein Rab-11A OS=Bos taurus GN=RAB11A PE=2 SV=3) HSP 1 Score: 287.73 bits (735), Expect = 4.455e-77 Identity = 141/177 (79.66%), Postives = 160/177 (90.40%), Query Frame = 3 Query: 117 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL 647 DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGNK+DLRHLRAV T++A AFAE+ F+ETSAL+ NVE AF +LT+IYR+VS+K + Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDYTNVEAAFQTILTEIYRIVSQKQM 181
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: RB2BV_BETVU (Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1) HSP 1 Score: 283.878 bits (725), Expect = 6.432e-76 Identity = 141/212 (66.51%), Postives = 171/212 (80.66%), Query Frame = 3 Query: 105 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPAALPRDRQIMWN*DDVSAVRKSMCS 740 A R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++ + K VKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV+RWL+ELRDH DSNIVIM+ GNK+DL+HLRAVS ED A AE+E F+ETSALE++N+E AF +LT+IY ++S+KAL + + LP + D + R+S CS Sbjct: 2 ANRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLKHLRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTILTEIYHIISKKALAAQEASSNLPGQGTTINVADASANQRRSCCS 213
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: RAA2A_ARATH (Ras-related protein RABA2a OS=Arabidopsis thaliana GN=RABA2A PE=2 SV=1) HSP 1 Score: 283.878 bits (725), Expect = 6.432e-76 Identity = 136/181 (75.14%), Postives = 163/181 (90.06%), Query Frame = 3 Query: 105 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL 647 A R D++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++ + + VKAQIWDTAGQERYRAITSAYYRGA+GALLVYDVT+ TFENV RWLKELRDH DSNIVIML+GNK DL+HLRAV+TEDA ++AE+E F+ETSALE++NVE AF +L+++YR++S+K++ Sbjct: 2 ARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKKSI 182
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: YPT3_SCHPO (GTP-binding protein ypt3 OS=Schizosaccharomyces pombe GN=ypt3 PE=1 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 3.530e-74 Identity = 136/182 (74.73%), Postives = 159/182 (87.36%), Query Frame = 3 Query: 117 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD 662 +D+YDYLFK VLIGDSGVGKSNLL RFTRNEF++ESKSTIGVEFATR+I D+K +KAQIWDTAGQERYRAITSAYYRGAVGAL+VYD+T+ +F+NV RWLKELR+H DSNIVIMLVGNK DL HLRAVSTE+A AFA N F+ETSA+++ NVE AF VLT+I+R+VS ++LE GDD Sbjct: 4 EDEYDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNRSLEAGDD 185
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: RB11C_LOTJA (Ras-related protein Rab11C OS=Lotus japonicus GN=RAB11C PE=2 SV=1) HSP 1 Score: 277.33 bits (708), Expect = 6.021e-74 Identity = 133/181 (73.48%), Postives = 158/181 (87.29%), Query Frame = 3 Query: 105 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL 647 A+R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++ + K VKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV+RWL+ELRDH DSNIVIM+ GNK+DL HLRAVS +D A +E+E F+ETSALE+ N+E AF +LT+IY +VS+KAL Sbjct: 2 AHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLNHLRAVSEDDGGALSEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKKAL 182
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: RB11A_TOBAC (Ras-related protein Rab11A OS=Nicotiana tabacum GN=RAB11A PE=2 SV=1) HSP 1 Score: 273.092 bits (697), Expect = 1.135e-72 Identity = 138/214 (64.49%), Postives = 170/214 (79.44%), Query Frame = 3 Query: 105 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPA--ALPRDRQIMWN*DDVSAVRKSMCS 740 A R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++ + K VKAQIWDTAGQERYRAITSAYYRGAVGALL YD+T+ TF+NV+RWL+ELRDH DSNIVI+L GNK+DL+HLRAVS +D A ++E F+ETSALE++NV+ AF +LT IY ++S+KAL + A ALP + D+ + V++ CS Sbjct: 2 ANRVDHEYDYLFKMVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLFYDITKRQTFDNVQRWLRELRDHRDSNIVIILAGNKSDLKHLRAVSEQDDQALVKKEGLSFLETSALEALNVDKAFQTILTDIYHIISKKALAAQEAAASTALPGQGTTINVSDNSANVKRGCCS 215
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: RAA2C_ARATH (Ras-related protein RABA2c OS=Arabidopsis thaliana GN=RABA2C PE=2 SV=4) HSP 1 Score: 271.937 bits (694), Expect = 2.529e-72 Identity = 138/213 (64.79%), Postives = 166/213 (77.93%), Query Frame = 3 Query: 108 YRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL---EIGDDPAALPRDRQIMWN*DDVSAVRKSMC 737 +R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+ + + K +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELRDH DSNIVIM+ GNK+DL HLR+V+ ED + AE+E F+ETSALE+ NVE AF +L +IY ++S+KAL E +A+P + N DD S K C Sbjct: 3 HRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKKALAAQEAAAANSAIPGQGTTI-NVDDTSGGAKRAC 214
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: RGP2_ORYSJ (Ras-related protein RGP2 OS=Oryza sativa subsp. japonica GN=RGP2 PE=2 SV=2) HSP 1 Score: 269.24 bits (687), Expect = 1.640e-71 Identity = 129/187 (68.98%), Postives = 160/187 (85.56%), Query Frame = 3 Query: 111 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPAA 671 R D +Y YLFK+VLIGDSGVGKSN+LSRFTRN FSL+SKSTIGVEFAT+S++ + K +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ +F+NV RWL+ELRDH DS+IVIM+VGNK+DL HLRAVS ++ A AE+E FF+ETSA+E++NVE AF ++T++Y +V+RKAL + AA Sbjct: 4 RVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIVIMMVGNKSDLIHLRAVSEDEGKALAEKEGLFFLETSAMEAVNVEEAFQTIITEVYGIVNRKALAAKEAAAA 190 The following BLAST results are available for this feature:
BLAST of FC923139 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923139 ID=FC923139; Name=FC923139; organism=Citrus clementina; type=EST; length=749bpback to top |