FC923139
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: RAB25_RABIT (Ras-related protein Rab-25 OS=Oryctolagus cuniculus GN=RAB25 PE=2 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 8.440e-60 Identity = 114/175 (65.14%), Postives = 142/175 (81.14%), Query Frame = 3 Query: 117 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK 641 ++DY+++FKVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ VKAQIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL DH ++ IV+MLVGNK+DL R V TE+A FAE F+ETSAL+S NVE AF VL +I+ VS++ Sbjct: 6 EEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: ARA1_ARATH (Ras-related protein ARA-1 OS=Arabidopsis thaliana GN=ARA-1 PE=2 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 8.440e-60 Identity = 114/173 (65.90%), Postives = 138/173 (79.77%), Query Frame = 3 Query: 129 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL 647 +YLFK+V+IGDS VGKSNLLSR+ RNEFS SK+TIGVEF T+S+ + K VKAQIWDTAGQER+RA+TSAYYRGAVGAL+VYD+TR TFE+V RWL EL+ H+D+ + MLVGNK DL ++RAVS E+ A AE E FF+ETSAL+S NV+ AF V+ IY VSRK L Sbjct: 10 EYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARMLVGNKCDLENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQL 182
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: ARA4_ARATH (Ras-related protein ARA-4 OS=Arabidopsis thaliana GN=ARA-4 PE=2 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 1.440e-59 Identity = 120/213 (56.34%), Postives = 151/213 (70.89%), Query Frame = 3 Query: 114 ADDDY---DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPAALPRDRQIMWN*DDVSAVRKSMCSK 743 +DDD +YLFK+V+IGDS VGKSNLL+R+ RNEF+ SK+TIGVEF T+S+ D K VKAQIWDTAGQER+RA+TSAYYRGAVGAL+VYD+TR TFENV RWL EL H+D+ + ML+GNK DL +RAVS E+ + AE E FFMETSAL+S NV+ AF V+ +IY +SRK L L +R + ++ S CS+ Sbjct: 2 SDDDERGEEYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKMLIGNKCDLESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQLNSDSYKEELTVNRVSLVKNENEGTKTFSCCSR 214
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: RB11C_DICDI (Ras-related protein Rab-11C OS=Dictyostelium discoideum GN=rab11C PE=1 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 6.688e-57 Identity = 105/182 (57.69%), Postives = 141/182 (77.47%), Query Frame = 3 Query: 117 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD 662 +++ +YLFK+V+IGDS VGKSNLL+RFTRNEF+ ++K+TIGV+F T+SI D+K + AQ WDTAGQER+RA+TS YYRGAVGA++VYD+T ++F+NV RWL ELR+ + +I+IM+VGNK+DL R V T++A AFAE F+ETSAL S NV +F +LT IY +VS K + DD Sbjct: 4 EEEAEYLFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIDNKTITAQCWDTAGQERFRAVTSGYYRGAVGAMIVYDITSKISFKNVTRWLNELREMAEQDILIMMVGNKSDLEMSREVPTKEAQAFAESNKISFLETSALNSTNVNQSFERLLTDIYHLVSSKKPMVVDD 185
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: RB11B_DICDI (Ras-related protein Rab-11B OS=Dictyostelium discoideum GN=rab11B PE=2 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 3.554e-50 Identity = 92/167 (55.09%), Postives = 129/167 (77.25%), Query Frame = 3 Query: 123 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIY 623 +YDYL K+V+IGDSGVGKSNLLSR+ +NEFS+ STIGVEF+T++++ D+K++K Q+WDTAGQE+Y +IT +YY+GA+GAL+VY++ +F N+E+WLK+ R++ + IMLVGNK+DL+ R VST + FAE+ F+ETSAL+S NVE AF + IY Sbjct: 7 EYDYLCKIVVIGDSGVGKSNLLSRYNKNEFSVGKLSTIGVEFSTKTLKIDNKLIKLQLWDTAGQEKYNSITESYYKGAIGALIVYNIADRNSFNNLEKWLKKFRENAHQDYGIMLVGNKSDLKEYREVSTLEGKQFAEKHYMQFIETSALDSNNVETAFNNLFNFIY 173
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: YPTV4_VOLCA (GTP-binding protein yptV4 OS=Volvox carteri GN=YPTV4 PE=3 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.825e-46 Identity = 90/179 (50.28%), Postives = 118/179 (65.92%), Query Frame = 3 Query: 126 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD 662 Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R I D K +K QIWDTAGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H + N+ IML+GNK DL H RAV+TE+ FA+ F+ETSA + NVE AF +IY+ + ++ ++ Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKIQDGVFDVSNE 181
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: YPTC4_CHLRE (GTP-binding protein YPTC4 OS=Chlamydomonas reinhardtii GN=YPTC4 PE=3 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.825e-46 Identity = 90/179 (50.28%), Postives = 118/179 (65.92%), Query Frame = 3 Query: 126 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD 662 Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R I D K +K QIWDTAGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H + N+ IML+GNK DL H RAV+TE+ FA+ F+ETSA + NVE AF +IY+ + ++ ++ Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKIQDGVFDVSNE 181
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: RAB2B_HUMAN (Ras-related protein Rab-2B OS=Homo sapiens GN=RAB2B PE=1 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 2.384e-46 Identity = 91/179 (50.84%), Postives = 118/179 (65.92%), Query Frame = 3 Query: 126 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD 662 Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + D K +K QIWDTAGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H+ SN+VIML+GNK+DL R V E+ AFA FMETSA + NVE AF +IYR + + ++ ++ Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHNE 181
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: RAB2A_MAIZE (Ras-related protein Rab-2-A OS=Zea mays GN=RAB2A PE=2 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 2.384e-46 Identity = 91/179 (50.84%), Postives = 118/179 (65.92%), Query Frame = 3 Query: 126 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD 662 Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R I D+K +K QIWDTAGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H ++N+ IMLVGNK DL H RAVS E+ FA+ FME SA + NVE AF + IY+ + ++ ++ Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNKCDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIYKKIQDGVFDVSNE 181
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: RAB2B_MAIZE (Ras-related protein Rab-2-B OS=Zea mays GN=RAB2B PE=2 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 3.114e-46 Identity = 91/179 (50.84%), Postives = 118/179 (65.92%), Query Frame = 3 Query: 126 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD 662 Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R I D+K +K QIWDTAGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H ++N+ IMLVGNK DL H RAVS E+ FA+ FME SA + NVE AF + IY+ + ++ ++ Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNKCDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIYKKIQDGVFDVSNE 181 The following BLAST results are available for this feature:
BLAST of FC923139 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923139 ID=FC923139; Name=FC923139; organism=Citrus clementina; type=EST; length=749bpback to top |