FC923139
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: YPT1_PHYIN (Ras-like GTP-binding protein YPT1 OS=Phytophthora infestans GN=YPT1 PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.599e-42 Identity = 90/166 (54.22%), Postives = 115/166 (69.28%), Query Frame = 3 Query: 123 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQI 620 +YDYLFK++LIGDSGVGKS LL RF + ++ STIGV+F R+I D K +K QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV++WL E+ + N+ +LVGNK+DL R VST+ A FAE F+ETSA + NVE AF + QI Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTDAAKEFAESLGIEFLETSAKNAANVEKAFMMMAAQI 169
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: RAB8B_BOVIN (Ras-related protein Rab-8B OS=Bos taurus GN=RAB8B PE=2 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.599e-42 Identity = 86/184 (46.74%), Postives = 119/184 (64.67%), Query Frame = 3 Query: 126 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPAALP 677 YDYLFK++LIGDSGVGK+ LL RF+ + F+ STIG++F R+I D K +K QIWDTAGQER+R IT+AYYRGA+G +LVYD+T +F+N++ W++ + +H S++ M++GNK D+ R VS E A F+E SA SMNVE AF + I ++RK + A P Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLEASAKSSMNVEEAFFTLARDIMTKLNRKMNDSNSSGAGGP 188
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: YPT1_YEAST (GTP-binding protein YPT1 OS=Saccharomyces cerevisiae GN=YPT1 PE=1 SV=2) HSP 1 Score: 172.555 bits (436), Expect = 2.089e-42 Identity = 87/177 (49.15%), Postives = 124/177 (70.06%), Query Frame = 3 Query: 117 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL 647 + +YDYLFK++LIG+SGVGKS LL RF+ + ++ + STIGV+F +++ D K VK QIWDTAGQER+R ITS+YYRG+ G ++VYDVT +F V+ WL+E+ + S ++ +LVGNK DL+ R V + A FA+ F+ETSAL+S NVE+AF + QI +S++ L Sbjct: 2 NSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGNKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKESMSQQNL 178
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: RBD2A_ARATH (Ras-related protein RABD2A OS=Arabidopsis thaliana GN=RABD2A PE=1 SV=3) HSP 1 Score: 172.555 bits (436), Expect = 2.089e-42 Identity = 88/166 (53.01%), Postives = 115/166 (69.28%), Query Frame = 3 Query: 123 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQI 620 +YDYLFK++LIGDSGVGKS LL RF+ + + STIGV+F R++ D K +K QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV++WL E+ + N+ +LVGNK+DL RA+ E A AFA+ FMETSA ++ NVE AF + I Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKSDLTENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASI 169
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: RAB8B_RAT (Ras-related protein Rab-8B OS=Rattus norvegicus GN=Rab8b PE=1 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 2.089e-42 Identity = 86/184 (46.74%), Postives = 119/184 (64.67%), Query Frame = 3 Query: 126 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPAALP 677 YDYLFK++LIGDSGVGK+ LL RF+ + F+ STIG++F R+I D K +K QIWDTAGQER+R IT+AYYRGA+G +LVYD+T +F+N++ W++ + +H S++ M++GNK D+ R VS E A F+ETSA S NVE AF + I ++RK + A P Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRKMNDSNSSGAGGP 188
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: RAB8B_MOUSE (Ras-related protein Rab-8B OS=Mus musculus GN=Rab8b PE=1 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 2.089e-42 Identity = 86/184 (46.74%), Postives = 119/184 (64.67%), Query Frame = 3 Query: 126 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPAALP 677 YDYLFK++LIGDSGVGK+ LL RF+ + F+ STIG++F R+I D K +K QIWDTAGQER+R IT+AYYRGA+G +LVYD+T +F+N++ W++ + +H S++ M++GNK D+ R VS E A F+ETSA S NVE AF + I ++RK + A P Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRKMNDSNSSGAGGP 188
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: RAB8B_PONAB (Ras-related protein Rab-8B OS=Pongo abelii GN=RAB8B PE=2 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 2.728e-42 Identity = 84/172 (48.84%), Postives = 116/172 (67.44%), Query Frame = 3 Query: 126 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK 641 YDYLFK++LIGDSGVGK+ LL RF+ + F+ STIG++F R+I D K +K QIWDTAGQER+R IT+AYYRGA+G +LVYD+T +F+N++ W++ + +H S++ M++GNK D+ R VS E A F+ETSA S NVE AF + I ++RK Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRK 176
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: RAB8B_HUMAN (Ras-related protein Rab-8B OS=Homo sapiens GN=RAB8B PE=1 SV=2) HSP 1 Score: 172.17 bits (435), Expect = 2.728e-42 Identity = 84/172 (48.84%), Postives = 116/172 (67.44%), Query Frame = 3 Query: 126 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK 641 YDYLFK++LIGDSGVGK+ LL RF+ + F+ STIG++F R+I D K +K QIWDTAGQER+R IT+AYYRGA+G +LVYD+T +F+N++ W++ + +H S++ M++GNK D+ R VS E A F+ETSA S NVE AF + I ++RK Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLARDIMTKLNRK 176
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: RAB1A_DICDI (Ras-related protein Rab-1A OS=Dictyostelium discoideum GN=rab1A PE=2 SV=2) HSP 1 Score: 171.4 bits (433), Expect = 4.653e-42 Identity = 90/166 (54.22%), Postives = 115/166 (69.28%), Query Frame = 3 Query: 123 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQI 620 DY YLFK++LIGDSGVGKS LL RF + +S STIGV+F R+I + K +K QIWDTAGQER+R ITS+YYRGA G ++VYDVT +TFENV +WL+E+ N+ +LVGNK+DL + V A AFA+ F+ETSA +S NVE AF + T+I Sbjct: 4 DYHYLFKLLLIGDSGVGKSCLLLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKLTFENVRQWLQEIDRFACENVNKLLVGNKSDLVAKKVVDFNTAKAFADSLQIPFLETSAKQSTNVEQAFMTMATEI 169
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: YPTM2_MAIZE (GTP-binding protein YPTM2 OS=Zea mays GN=YPTM2 PE=2 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 6.077e-42 Identity = 87/166 (52.41%), Postives = 114/166 (68.67%), Query Frame = 3 Query: 123 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQI 620 +YDYLFK++LIGDSGVGKS LL RF + + STIGV+F R++ D K +K QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV++WL E+ + N+ +LVGNK+DL + V+TE A AFA+ FMETSA + NV+ AF + I Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKSDLTANKVVATETAKAFADEMGIPFMETSAKNATNVQQAFMAMAASI 169 The following BLAST results are available for this feature:
BLAST of FC923139 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923139 ID=FC923139; Name=FC923139; organism=Citrus clementina; type=EST; length=749bpback to top |