FC923139
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: RAB8A_BOVIN (Ras-related protein Rab-8A OS=Bos taurus GN=RAB8A PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.768e-41 Identity = 82/172 (47.67%), Postives = 116/172 (67.44%), Query Frame = 3 Query: 126 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK 641 YDYLFK++LIGDSGVGK+ +L RF+ + F+ STIG++F R+I D K +K QIWDTAGQER+R IT+AYYRGA+G +LVYD+T +F+N+ W++ + +H +++ M++GNK D+ R VS E A FMETSA ++NVENAF + I + +K Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFYTLARDIKAKMDKK 176
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: RAB1_THEPA (Ras-related protein Rab-1 OS=Theileria parva GN=rab1 PE=1 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.768e-41 Identity = 81/163 (49.69%), Postives = 114/163 (69.94%), Query Frame = 3 Query: 123 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENV-ERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEV 608 +YDYLFK+++IGDSG GKS+LL RF N +S STIGV+F ++++ D+ +K QIWDTAGQER+R ITS YYRGA G + VYDVT ++F+++ E WL+++ + SN+ +L+GNK DL R VS ++A AE+ N ++E SA NVE AFT + Sbjct: 3 EYDYLFKIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNTTIKLQIWDTAGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYATSNVCKLLIGNKIDLAESRVVSADEAKHVAEQNNMNYIEASAKTDSNVEKAFTTI 165
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: RAB8A_PONAB (Ras-related protein Rab-8A OS=Pongo abelii GN=RAB8A PE=2 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.309e-41 Identity = 82/172 (47.67%), Postives = 116/172 (67.44%), Query Frame = 3 Query: 126 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK 641 YDYLFK++LIGDSGVGK+ +L RF+ + F+ STIG++F R+I D K +K QIWDTAGQER+R IT+AYYRGA+G +LVYD+T +F+N+ W++ + +H +++ M++GNK D+ R VS E A FMETSA ++NVENAF + I + +K Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKRDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKK 176
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: ARA3_ARATH (Ras-related protein ARA-3 OS=Arabidopsis thaliana GN=ARA-3 PE=2 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.309e-41 Identity = 86/167 (51.50%), Postives = 110/167 (65.87%), Query Frame = 3 Query: 111 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL-RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEV 608 RA DYDYL K++LIGDSGVGKS LL RF+ F+ +TIG++F R+I D K +K QIWDTAGQER+R IT+AYYRGA+G LLVYDVT +F N+ W++ + H N+ +LVGNKAD+ RAV T A A+ F ETSA ++NVE F + Sbjct: 7 RARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSI 173
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: RAB1B_MOUSE (Ras-related protein Rab-1B OS=Mus musculus GN=Rab1b PE=1 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 3.939e-41 Identity = 87/181 (48.07%), Postives = 119/181 (65.75%), Query Frame = 3 Query: 123 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP 665 +YDYLFK++LIGDSGVGKS LL RF + ++ STIGV+F R+I D K +K QIWDTAGQER+R ITS+YYRGA G ++VYDVT ++ NV++WL+E+ + N+ +LVGNK+DL + V A FA+ F+ETSA + NVE AF + +I + + A G+ P Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGERP 184
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: RIC1_ORYSJ (Ras-related protein RIC1 OS=Oryza sativa subsp. japonica GN=RIC1 PE=2 SV=2) HSP 1 Score: 167.933 bits (424), Expect = 5.144e-41 Identity = 88/184 (47.83%), Postives = 118/184 (64.13%), Query Frame = 3 Query: 123 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPAAL 674 +YDYLFK++LIGDSGVGKS LL RF + + STIGV+F R++ D K +K QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV++WL E+ + N+ +LVGNK DL R VS E A A+ F+ETSA ++ NVE AF + +I ++ + PA + Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLAENRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKNRMASQPATNASKPATV 187
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: RAB1B_RAT (Ras-related protein Rab-1B OS=Rattus norvegicus GN=Rab1b PE=1 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 5.144e-41 Identity = 86/181 (47.51%), Postives = 119/181 (65.75%), Query Frame = 3 Query: 123 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP 665 +YDYLFK++LIGDSGVGKS LL RF + ++ STIGV+F R+I D K +K QIWDTAGQER+R +TS+YYRGA G ++VYDVT ++ NV++WL+E+ + N+ +LVGNK+DL + V A FA+ F+ETSA + NVE AF + +I + + A G+ P Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTVTSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGERP 184
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: RAB1B_PONAB (Ras-related protein Rab-1B OS=Pongo abelii GN=RAB1B PE=2 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 5.144e-41 Identity = 87/181 (48.07%), Postives = 119/181 (65.75%), Query Frame = 3 Query: 123 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP 665 +YDYLFK++LIGDSGVGKS LL RF + ++ STIGV+F R+I D K +K QIWDTAGQER+R ITS+YYRGA G ++VYDVT ++ NV++WL+E+ + N+ +LVGNK+DL + V A FA+ F+ETSA + NVE AF + +I + + A G+ P Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGERP 184
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: RAB1B_MACFA (Ras-related protein Rab-1B OS=Macaca fascicularis GN=RAB1B PE=2 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 5.144e-41 Identity = 87/181 (48.07%), Postives = 119/181 (65.75%), Query Frame = 3 Query: 123 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP 665 +YDYLFK++LIGDSGVGKS LL RF + ++ STIGV+F R+I D K +K QIWDTAGQER+R ITS+YYRGA G ++VYDVT ++ NV++WL+E+ + N+ +LVGNK+DL + V A FA+ F+ETSA + NVE AF + +I + + A G+ P Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDRESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGERP 184
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: RAB1B_HUMAN (Ras-related protein Rab-1B OS=Homo sapiens GN=RAB1B PE=1 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 5.144e-41 Identity = 87/181 (48.07%), Postives = 119/181 (65.75%), Query Frame = 3 Query: 123 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP 665 +YDYLFK++LIGDSGVGKS LL RF + ++ STIGV+F R+I D K +K QIWDTAGQER+R ITS+YYRGA G ++VYDVT ++ NV++WL+E+ + N+ +LVGNK+DL + V A FA+ F+ETSA + NVE AF + +I + + A G+ P Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGERP 184 The following BLAST results are available for this feature:
BLAST of FC923139 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923139 ID=FC923139; Name=FC923139; organism=Citrus clementina; type=EST; length=749bpback to top |