FC923141

Overview
NameFC923141
Unique NameFC923141
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length737
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923141 vs. ExPASy Swiss-Prot
Match: NIA7_HORVU (Nitrate reductase [NAD(P)H] OS=Hordeum vulgare GN=NAR-7 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.610e-31
Identity = 81/211 (38.39%), Postives = 107/211 (50.71%), Query Frame = 1
Query:  100 RHPIL-QINSKEPFNAEPPRSALIS-SYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFMRD-IRMLPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVKFVSIDKCKEENGGPYKASIPLSQATSPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVNGWI 723
            RHP L ++  K PFN+EPP   L+S  ++TPV   Y RNHG +P  D   ++ V + GL++      M + +          TL CAGNRR   + VR   G  W   AI   VW G +L DVL   G+     +      +V F   +      G  Y  S+  S A  P  DV+LAY  NGEPL  DHG+P+RV+VPG IG R V  W+
Sbjct:   84 RHPALVRLTGKHPFNSEPPLPRLMSHGFITPVPLHYVRNHGAVPKAD-WSTWTVEVTGLVKRPVKFTMEELVTGFQAVEFPVTLVCAGNRRKEQNMVRQSSGFNWGPGAISTTVWRGVRLRDVLRRCGV-----MGAGAASNVCFEGAEDLPGGGGCKYGTSLRRSVAMDPARDVILAYMQNGEPLAPDHGFPVRVIVPGFIGGRMVK-WL 287          
BLAST of FC923141 vs. ExPASy Swiss-Prot
Match: NIA_PICAN (Nitrate reductase [NADPH] OS=Pichia angusta GN=YNR1 PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.745e-31
Identity = 77/209 (36.84%), Postives = 111/209 (53.11%), Query Frame = 1
Query:  109 ILQINSKEPFNAEPPRSALISS-YVTPVDFFYKRNHGPIPIVDD--IESYYVSICGLIENSKDLFMRDI-RMLPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVKFVSIDKCKEENGGPYKASIPLSQATSPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVNGWI 723
            +L++    PFN+EPP + L  S ++TPV   + RNHGP+P V D  I  + VSI G++E    + + DI      Y+   T+ CAGNRR   + V+   G  W  +    ++W+G  L DV+                K  +FV ++       G Y+  I LS    PE  +++AY+ NGE L+ DHG PLRVV+PGVIG RSV  W+
Sbjct:   54 LLRLTGSHPFNSEPPLTKLYDSGFLTPVSLHFVRNHGPVPYVPDENILDWEVSIEGMVETPYKIKLSDIMEQFDIYSTPVTMVCAGNRRKEQNMVKKGAGFNWGAAGTSTSLWTGCMLGDVIGKA----------RPSKRARFVWMEGADNPANGAYRTCIRLSWCMDPERCIMIAYQQNGEWLHPDHGKPLRVVIPGVIGGRSVK-WL 251          
BLAST of FC923141 vs. ExPASy Swiss-Prot
Match: NIA2_SOYBN (Inducible nitrate reductase [NADH] 2 OS=Glycine max GN=INR2 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.745e-31
Identity = 77/207 (37.20%), Postives = 106/207 (51.21%), Query Frame = 1
Query:  109 ILQINSKEPFNAEPPRSALIS-SYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFMRDI-RMLPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVKFVSIDKCKEENGGPYKASIPLSQATSPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVNGWI 723
            ++++  K PFN+EPP   L+   ++TPV   Y RNHGP+P     E + V + GL+       M  +    P     ATL CAGNRR   + V+   G  W  +AI  +VW G  L  +L+  GI   T     G  HV F   +      G  Y  SI    A  P  D++LAY  NGEPL+ DHG+P+R+++PG IG R V  W+
Sbjct:   89 LVRLTGKHPFNSEPPLPRLMHHGFITPVPLHYVRNHGPVPRAR-WEDWTVEVTGLVTRPTCFTMEQLLHDFPSREFPATLVCAGNRRKEQNMVKQSIGFNWGAAAISTSVWRGVPLRTLLKSCGIYTRTK----GALHVCFEGAEDLPGGGGSKYGTSILREVALDPSRDIILAYMQNGEPLSPDHGFPVRMIIPGFIGGRMVK-WL 289          
BLAST of FC923141 vs. ExPASy Swiss-Prot
Match: NIA1_ORYSJ (Nitrate reductase [NADH] 1 OS=Oryza sativa subsp. japonica GN=NIA1 PE=2 SV=3)

HSP 1 Score: 135.191 bits (339), Expect = 3.586e-31
Identity = 76/211 (36.02%), Postives = 110/211 (52.13%), Query Frame = 1
Query:  100 RHP-ILQINSKEPFNAEPPRSALIS-SYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFMRD-IRMLPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVKFVSIDKCKEENGGPYKASIPLSQATSPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVNGWI 723
            R+P ++++  K P N EPP + L+   ++TP    Y RNHG +P   D  ++ V + GL++    L M + +   P   I  TL CAGNRR   + V+   G  W  + +  +VW GA+L DVL   GI      ++ G  +V F   +      G  Y  SI    A  P  D++LAY  NGEPL  DHG+P+R ++PG IG R V  W+
Sbjct:  108 RNPSLIRLTGKHPLNCEPPLARLMHHGFITPAALHYVRNHGAVPR-GDWSTWTVDVTGLVKRPMRLTMDELVNGFPAVEIPVTLVCAGNRRKEQNMVQQTVGFNWGAAGVSTSVWRGARLRDVLRRCGI----MPSKGGALNVCFEGAEDLPGGGGSKYGTSITRQWALDPSRDIMLAYMQNGEPLLPDHGFPVRAIIPGCIGGRMVK-WV 312          
BLAST of FC923141 vs. ExPASy Swiss-Prot
Match: NIA2_BRANA (Nitrate reductase [NADH], clone PBNBR1412 OS=Brassica napus GN=NIA2 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 6.116e-31
Identity = 76/207 (36.71%), Postives = 107/207 (51.69%), Query Frame = 1
Query:  109 ILQINSKEPFNAEPPRSALIS-SYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFMRD-IRMLPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVKFVSIDKCKEENGGPYKASIPLSQATSPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVNGWI 723
            ++++  K PFNAEPP   L+   ++TPV   Y RNHG +P  D  E + V I GL++      M + I   P      TL CAGNRR   + V+   G  W  + +  ++W G  L+++L   GI +     R GG +V F   +      G  Y  SI    A  P  D++LAY  NGE L  DHG+P+R++VPG IG R V  W+
Sbjct:  111 MVRLTGKHPFNAEPPLPRLMHHGFITPVPLHYVRNHGTVPKADWSE-WTVEITGLVKRPAKFTMEELISEFPSREFPVTLVCAGNRRKEQNMVKQTIGFNWGSAGVSTSLWKGVPLSEILGRCGIYS----RRGGGLNVCFEGAEDLPGGGGSKYGTSIKKEMAMDPARDIILAYMQNGELLTPDHGFPVRIIVPGFIGGRMVK-WL 311          
BLAST of FC923141 vs. ExPASy Swiss-Prot
Match: NIA_CICIN (Nitrate reductase [NADH] OS=Cichorium intybus GN=NIA PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 7.988e-31
Identity = 74/211 (35.07%), Postives = 109/211 (51.66%), Query Frame = 1
Query:  100 RHP-ILQINSKEPFNAEPPRSALIS-SYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFMRD-IRMLPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVKFVSIDKCKEENGGPYKASIPLSQATSPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVNGWI 723
            R+P ++++  K PFN+EPP + L+   ++TP    Y RNHGP+P     E + V ICGL++      M   +   P      TL CAGNRR   +  +   G  W  + I  +VW G  L  +L+  GI +     + G  +V F   +      G  Y  SI +  A  P  D++LAY  NGE L+ DHG+P+R+++PG IG R V  W+
Sbjct:  101 RNPSMVRLTGKHPFNSEPPLNKLMQHGFITPDPLHYVRNHGPVPNAT-WEDWTVEICGLVKRPARFSMTQLVNEFPSREFPVTLVCAGNRRKEQNLTKQTIGFNWGAAGISTSVWKGVPLVHILKRCGIYS----RKKGALNVCFEGAEDLPGGGGSKYGTSIKIEMAMDPARDIILAYMQNGEKLSPDHGFPVRMIIPGFIGGRMVK-WL 305          
BLAST of FC923141 vs. ExPASy Swiss-Prot
Match: NIA_PETHY (Nitrate reductase [NADH] OS=Petunia hybrida GN=NIA PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.363e-30
Identity = 74/209 (35.41%), Postives = 108/209 (51.67%), Query Frame = 1
Query:  109 ILQINSKEPFNAEPPRSALIS-SYVTPVDFFYKRNHGPIP--IVDDIESYYVSICGLIENSKDLFMRD-IRMLPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVKFVSIDKCKEENGGPYKASIPLSQATSPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVNGWI 723
            ++++  K PFN+EPP + L+   ++TPV   Y RNHGP+P  + DD   + V + GL++      M   +   P   +  TL CAGNRR   + V+   G  W  +A+   VW G  L  +L+  GI + T     G  ++ F   D      G  Y  SI    A  P  D+++AY  NGE L  DHG+PLR+++PG IG R V  W+
Sbjct:  107 MIRLTGKHPFNSEPPLARLMHHGFITPVPLHYVRNHGPVPKGMWDD---WTVEVTGLVKRPMKFTMEQLVNEFPSRELPVTLVCAGNRRKEQNMVKQTIGFNWGAAAVSTTVWRGVPLRAILKRCGIYSRTK----GALNICFEGADVLPGGGGSKYGTSIKKEFAMDPSRDIIIAYMQNGEKLTPDHGFPLRMIIPGFIGGRMVK-WL 307          
BLAST of FC923141 vs. ExPASy Swiss-Prot
Match: NIA1_HORVU (Nitrate reductase [NADH] OS=Hordeum vulgare PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 6.762e-30
Identity = 74/211 (35.07%), Postives = 109/211 (51.66%), Query Frame = 1
Query:  100 RHP-ILQINSKEPFNAEPPRSALIS-SYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFMRDIRM-LPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVKFVSIDKCKEENGGPYKASIPLSQATSPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVNGWI 723
            R+P ++++  K P N EPP + L+   ++TP    Y RNHG +P   D  ++ V + GL+     L M ++    P   + ATL CAGNRR   + V+   G  W  + +  +VW GA+L DVL   G+ +     +    +V F   +      G  Y  S+    A  P  D++L Y  NGEPL  DHGYP+RV++PG IG R V  W+
Sbjct:  105 RNPSLIRLTGKHPLNCEPPLARLMHHGFITPAPLHYVRNHGAVPR-GDWATWTVEVTGLVRRPARLTMDELANGFPAAEVPATLVCAGNRRKEQNMVQQTVGFNWGAAGVSTSVWRGARLRDVLLRCGVMS----KKGQALNVCFEGAEDLPGGGGSKYGTSVSREWAMDPSRDIILPYAQNGEPLLPDHGYPVRVLIPGCIGGRMVK-WV 309          
BLAST of FC923141 vs. ExPASy Swiss-Prot
Match: NIA_LOTJA (Nitrate reductase [NADH] OS=Lotus japonicus GN=NIA PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 8.832e-30
Identity = 78/208 (37.50%), Postives = 106/208 (50.96%), Query Frame = 1
Query:  109 ILQINSKEPFNAEPPRSALIS-SYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFM-RDIRMLPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRS-GGKHVKFVSIDKCKEENGGPYKASIPLSQATSPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVNGWI 723
            ++++  K PFN+EPP   L+   ++TPV   Y RNHGP+P     + + V + GL++      M R +R  P   +  TL CAGNRR   + VR   G  W  + +  +VW G  L  +L    I      TRS G  HV F   +      G  Y  SI    A  P  DV+LAY  NGE L  DHG+P+RV++PG IG R V  W+
Sbjct:   92 MVRLTGKHPFNSEPPLPRLMHHGFITPVPLHYVRNHGPVPKAR-WDDWTVEVTGLVKTPTRFSMDRLVRDFPSRELPVTLVCAGNRRKEQNMVRQSIGFNWGSAGVSTSVWRGVSLRHILRRCRIQ-----TRSRGALHVCFEGDEDLPGGGGSKYSTSIRREVAMDPSRDVILAYMQNGEVLAPDHGFPVRVIIPGFIGGRMVK-WL 292          
BLAST of FC923141 vs. ExPASy Swiss-Prot
Match: NIA_SOLLC (Nitrate reductase [NADH] OS=Solanum lycopersicum GN=NIA PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.153e-29
Identity = 71/207 (34.30%), Postives = 105/207 (50.72%), Query Frame = 1
Query:  109 ILQINSKEPFNAEPPRSALIS-SYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFMRD-IRMLPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVKFVSIDKCKEENGGPYKASIPLSQATSPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVNGWI 723
            ++++  K PFN+EPP S L+   ++TPV   Y RNHGP+P       + V + GL++      M   +   P      TL CAGNRR   + V+   G  W  +A+   VW G  L  +L+  G+ +     + G  +V F   D      G  Y  SI    A  P  D+++AY  NGE L+ DHG+P+R+++PG IG R V  W+
Sbjct:  108 LIRLTGKHPFNSEPPLSRLMHHGFITPVPLHYVRNHGPVPKAS-WSDWTVEVTGLVKRPMKFTMDQLVNEFPSREFPVTLVCAGNRRKEQNMVKQTIGFNWGAAAVSTTVWRGVPLRALLKRCGVQS----KKKGALNVCFEGSDVLPGGGGSKYGTSIKKEFAMDPSRDIIVAYMQNGEMLSPDHGFPVRMIIPGFIGGRMVK-WL 308          
The following BLAST results are available for this feature:
BLAST of FC923141 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
NIA7_HORVU1.610e-3138.39Nitrate reductase [NAD(P)H] OS=Hordeum vulgare GN=... [more]
NIA_PICAN2.745e-3136.84Nitrate reductase [NADPH] OS=Pichia angusta GN=YNR... [more]
NIA2_SOYBN2.745e-3137.20Inducible nitrate reductase [NADH] 2 OS=Glycine ma... [more]
NIA1_ORYSJ3.586e-3136.02Nitrate reductase [NADH] 1 OS=Oryza sativa subsp. ... [more]
NIA2_BRANA6.116e-3136.71Nitrate reductase [NADH], clone PBNBR1412 OS=Brass... [more]
NIA_CICIN7.988e-3135.07Nitrate reductase [NADH] OS=Cichorium intybus GN=N... [more]
NIA_PETHY1.363e-3035.41Nitrate reductase [NADH] OS=Petunia hybrida GN=NIA... [more]
NIA1_HORVU6.762e-3035.07Nitrate reductase [NADH] OS=Hordeum vulgare PE=3 S... [more]
NIA_LOTJA8.832e-3037.50Nitrate reductase [NADH] OS=Lotus japonicus GN=NIA... [more]
NIA_SOLLC1.153e-2934.30Nitrate reductase [NADH] OS=Solanum lycopersicum G... [more]

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Properties
Property NameValue
Genbank descriptionC31701E07EF StrClemenN Citrus clementina cDNA clone C31701E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923141 ID=FC923141; Name=FC923141; organism=Citrus clementina; type=EST; length=737bp
GAAACTTAAGAAAGCTTTCGACTCCAGTGAAGGAGAGAAGAAGAAGCTTC
GACTATGCCGGGACTAACAGCACCATCAAGTTACTCTCAAGAGCCGCCTC
GTCATCCTATCCTTCAAATTAATTCCAAGGAACCATTCAATGCGGAGCCG
CCGCGGTCGGCCTTGATTTCATCTTACGTGACGCCTGTTGATTTTTTCTA
CAAGAGAAATCATGGCCCAATTCCGATAGTTGATGATATTGAAAGCTATT
ATGTCTCAATATGTGGTTTAATTGAAAATTCCAAAGACCTGTTTATGAGG
GATATTCGGATGCTCCCAAAATACAACATCACTGCCACTTTGCAGTGTGC
GGGTAACCGAAGGACAGCGATGAGCAATGTCAGAACGGTGAAGGGAGTTG
GCTGGGATGTTTCTGCTATAGGAAATGCTGTCTGGAGTGGTGCCAAATTG
GCTGATGTTCTTGAACTGGTTGGGATACCAAACTTGACAAGTGTCACTAG
GTCAGGTGGAAAACATGTTAAATTTGTAAGCATTGACAAGTGTAAGGAGG
AGAATGGGGGTCCATATAAAGCATCAATTCCACTTAGTCAAGCTACAAGC
CCAGAAGCTGATGTTTTACTTGCGTATGAGATGAATGGAGAGCCTCTTAA
TAGAGATCATGGTTATCCTCTTCGGGTAGTTGTACCGGGTGTTATAGGTG
CTCGTTCTGTCAATGGGTGGATACCATCACATCCTTG
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