FC923141

Overview
NameFC923141
Unique NameFC923141
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length737
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923141 vs. ExPASy Swiss-Prot
Match: NIA2_HORVU (Nitrate reductase [NADH] (Fragment) OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.153e-29
Identity = 74/211 (35.07%), Postives = 109/211 (51.66%), Query Frame = 1
Query:  100 RHP-ILQINSKEPFNAEPPRSALIS-SYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFMRDIRM-LPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVKFVSIDKCKEENGGPYKASIPLSQATSPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVNGWI 723
            R+P ++++  K P N EPP + L+   ++TP    Y RNHG +P   D  ++ V + GL+     L M ++    P   + ATL CAGNRR   + V+   G  W  + +  +VW GA+L DVL   G+ +     +    +V F   +      G  Y  S+    A  P  D++L Y  NGEPL  DHGYP+RV++PG IG R V  W+
Sbjct:  102 RNPSLIRLTGKHPLNCEPPLARLMHHGFITPAPLHYVRNHGAVPR-GDWATWTVEVTGLVRRPARLTMDELANGFPAAEVPATLVCAGNRRKEQNMVQQTVGFNWGAAGVSTSVWRGARLRDVLLRCGVMS----KKGQALNVCFEGAEDLPGGGGSKYGTSMSREWAMDPSRDIILPYAQNGEPLLPDHGYPVRVLIPGCIGGRMVK-WV 306          
BLAST of FC923141 vs. ExPASy Swiss-Prot
Match: NIA3_MAIZE (Nitrate reductase [NADH] 3 OS=Zea mays PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.506e-29
Identity = 78/209 (37.32%), Postives = 111/209 (53.11%), Query Frame = 1
Query:  109 ILQINSKEPFNAEPPRSALISSYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFMRDI-RMLPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVKFVSIDKCKEENGG---PYKASIPLSQATSPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVNGWI 723
            ++++  K   N E PR  +   ++TPV   Y RNHGP+P   D  ++ V + GL+   + L M ++ R  P   +  TL CAGNRR   + VR   G  W   A+  +VW GA+L+DVL   G     S++R GG    FV  +  ++  GG    Y  SI    A  P  DV+LAY+ NG PL  DHG+P+R++VPG    R V  W+
Sbjct:  103 LIRLTGKHSLNGELPR-LMRHGFITPVPRHYVRNHGPVPR-GDWATWTVEVTGLVRRPRALTMDELARDFPALELPVTLVCAGNRRKEQNMVRQTLGFNWGPGAVSTSVWRGARLSDVLRRCG-----SMSRKGG--ALFVCFEGAEDLPGGGGTKYGTSITREVALDPTMDVMLAYQQNGGPLLPDHGFPVRLIVPGCTAGRMVK-WL 301          
BLAST of FC923141 vs. ExPASy Swiss-Prot
Match: NIA_NEUCR (Nitrate reductase [NADPH] OS=Neurospora crassa GN=nit-3 PE=1 SV=3)

HSP 1 Score: 129.028 bits (323), Expect = 2.570e-29
Identity = 75/222 (33.78%), Postives = 120/222 (54.05%), Query Frame = 1
Query:  109 ILQINSKEPFNAEPPRSALIS-SYVTPVDFFYKRNHGPIPIV-------------DDIESYYVSICGLIENSKDLFMRDIRMLPKY-NIT--ATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVKFVSIDKCKEENGGPYKASIPLSQATSPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVNGWI 723
            ++++    PFN EPP +AL    ++TP +  Y RNHGPIP               D + ++  ++ GL+E+   + +R++    K+ N+T   TL CAGNRR   + +R  KG  W    +  A+W+G  L+++L          +T+ GG   ++V  +   +   G Y  S+ L+ A  P   +++A++MNGE L+ DHG P+RVVVPG IG RSV  W+
Sbjct:  144 LIRLTGSHPFNVEPPLTALFEHGFLTPQNLHYVRNHGPIPSSVATPPATINKEEDDSLLNWEFTVEGLVEHPLKISVRELMDASKWDNVTYPVTLVCAGNRRKEQNVLRKSKGFSWGAGGLSTALWTGVGLSEILA-----RAKPLTKKGGG-ARYVCFEGADQLPNGTYGTSVKLAWAMDPNKGIMVAHKMNGENLHPDHGRPVRVVVPGQIGGRSVK-WL 358          
BLAST of FC923141 vs. ExPASy Swiss-Prot
Match: NIA1_TOBAC (Nitrate reductase [NADH] 1 OS=Nicotiana tabacum GN=NIA1 PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.356e-29
Identity = 71/207 (34.30%), Postives = 105/207 (50.72%), Query Frame = 1
Query:  109 ILQINSKEPFNAEPPRSALIS-SYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFMRD-IRMLPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVKFVSIDKCKEENGGPYKASIPLSQATSPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVNGWI 723
            ++++  K PFN+EPP + L+   ++TPV   Y RNHGP+P     + + V + GL++      M   +   P   +  TL CAGNRR   + V+   G  W  +A+   VW G  L  +L+  G+ +       G  +V F   D      G  Y  SI    A  P  D+++AY  NGE L  DHG+P+R+++PG IG R V  WI
Sbjct:  103 LIRLTGKHPFNSEPPLNRLMHHGFITPVPLHYVRNHGPVP-KGTWDDWTVEVTGLVKRPMKFTMDQLVNEFPSRELPVTLVCAGNRRKEQNMVKQTIGFNWGAAAVSTTVWRGVPLRALLKRYGVFS----KNKGALNVCFEGADVLPGGGGSKYGTSIKKEFAMDPARDIIIAYMQNGEKLAPDHGFPVRMIIPGFIGGRMVK-WI 303          
BLAST of FC923141 vs. ExPASy Swiss-Prot
Match: NIA1_BRANA (Nitrate reductase [NADH], clone PBNBR1405 OS=Brassica napus GN=NIA1 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.356e-29
Identity = 73/207 (35.27%), Postives = 104/207 (50.24%), Query Frame = 1
Query:  109 ILQINSKEPFNAEPPRSALIS-SYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFMRD-IRMLPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVKFVSIDKCKEENGGPYKASIPLSQATSPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVNGWI 723
            ++++  K PFNAE P   L+   ++TPV   Y RNHG +P  +    + V + GL++    L M   I   P      TL CAGNRR   + V+   G  W  + +  ++W G  L+DVL   G+ +     R G  +V F   +      G  Y  SI    A  P  D++LAY  NGE L  DHG+P+RV++PG IG R V  W+
Sbjct:  111 MVRLTGKHPFNAEAPLPRLMHHGFITPVPLHYVRNHGGVPKAE-WSDWSVEVTGLVKRPAGLTMEQLISEFPSREFPVTLVCAGNRRKEQNMVKQTIGFNWGSAGVSTSLWRGVALSDVLRRCGVYS----KRGGALNVCFEGAEDLPGGGGSKYGTSIKKEMAMDPARDIILAYMQNGELLTPDHGFPVRVIIPGFIGGRMVK-WL 311          
BLAST of FC923141 vs. ExPASy Swiss-Prot
Match: NIA1_PHAVU (Nitrate reductase [NADH] 1 OS=Phaseolus vulgaris GN=NIA1 PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.383e-29
Identity = 81/247 (32.79%), Postives = 115/247 (46.56%), Query Frame = 1
Query:   37 EEEASTMPGLTAPSSYSQEP----PRHP------------ILQINSKEPFNAEPPRSALIS-SYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFMRD-IRMLPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVKFVSIDKCKEENGGPYKASIPLSQATSPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVNGWI 723
            +EEA+    L   SS   EP    PR              ++++  K PFNAEPP   L+   ++TP    Y R+HGP+P     E + V + GL+       M   +   P +   ATL CAGNRR   + V+   G  W    +  +VW G  L  +L+  GI +       G  HV F   +      G  Y  S+    A  P  D++LAY  NGE L+ DHG+P+R+++PG IG R V  W+
Sbjct:   47 DEEAAVWKELVLKSSAGVEPSIFDPRDDGTSDQWIKRNASMIRLTGKHPFNAEPPLPRLMQHGFITPSPIHYVRSHGPVPHAR-WEDWTVEVTGLVTRPTCFTMEQLVNDFPSHEFPATLVCAGNRRKEQNMVKQSIGFNWGAGGVSTSVWRGVSLRSLLKRCGIYSRAK----GALHVCFEGAEDLPGGGGSNYGTSLMREVALDPSRDIILAYMQNGELLSPDHGFPVRMIIPGFIGGRMVK-WL 287          
BLAST of FC923141 vs. ExPASy Swiss-Prot
Match: NIA1_ARATH (Nitrate reductase [NADH] 1 OS=Arabidopsis thaliana GN=NIA1 PE=1 SV=3)

HSP 1 Score: 127.872 bits (320), Expect = 5.725e-29
Identity = 73/207 (35.27%), Postives = 104/207 (50.24%), Query Frame = 1
Query:  109 ILQINSKEPFNAEPPRSALIS-SYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFMRD-IRMLPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVKFVSIDKCKEENGGPYKASIPLSQATSPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVNGWI 723
            +L++  K PFNAE P   L+   ++TPV   Y RNHG +P  +    + + I GL++      M + I   P      TL CAGNRR   + V+   G  W  + +  ++W G  L+++L   GI +     R G  +V F   +      G  Y  SI    A  P  D++LAY  NGE L  DHG+P+RV+VPG IG R V  W+
Sbjct:  117 MLRLTGKHPFNAEAPLPRLMHHGFITPVPLHYVRNHGAVPKAN-WSDWSIEITGLVKRPAKFTMEELISEFPSREFPVTLVCAGNRRKEQNMVKQTIGFNWGSAGVSTSLWKGIPLSEILRRCGIYS----RRGGALNVCFEGAEDLPGGGGSKYGTSIKKEMAMDPARDIILAYMQNGELLTPDHGFPVRVIVPGFIGGRMVK-WL 317          
BLAST of FC923141 vs. ExPASy Swiss-Prot
Match: NIA_SPIOL (Nitrate reductase [NADH] OS=Spinacia oleracea GN=NIA PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.477e-29
Identity = 74/214 (34.58%), Postives = 112/214 (52.34%), Query Frame = 1
Query:  100 RHP-ILQINSKEPFNAEPPRSALIS-SYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIEN----SKDLFMRDIRMLPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVKFVSIDKCKEENGGPYKASIPLSQATSPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVNGWI 723
            R+P ++++  K PFN+EPP + L+   ++TPV   Y RNHGP+P     E + V + GL++     + D  + D +         TL CAGNRR   +  +   G  W  +A+  +VW G  L DVL+  G+ +    +  G  +V F   +      G  Y  S+    A  P  D++LAY  NGE L+ DHGYP+R+++PG IG R V  W+
Sbjct:  120 RNPSMIRLTGKHPFNSEPPLTRLMHHGFLTPVPLHYVRNHGPVPNAK-WEDWTVEVTGLVKRPIRFTMDQLVNDFQ---SREFPVTLVCAGNRRKEQNMTKQSIGFNWGSAAVSTSVWRGVPLRDVLKRCGVMS----SLKGALNVCFEGAEDLPGGGGSKYGTSVKREFAMDPARDIILAYMQNGEKLSPDHGYPVRMIIPGFIGGRMVK-WL 324          
BLAST of FC923141 vs. ExPASy Swiss-Prot
Match: NIA_FUSOX (Nitrate reductase [NADPH] OS=Fusarium oxysporum GN=NIA PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.765e-29
Identity = 77/224 (34.38%), Postives = 114/224 (50.89%), Query Frame = 1
Query:   64 LTAPSSYSQEPPRHPILQINSKEPFNAEPPRSALISS-YVTPVDFFYKRNHGPIPIV--DDIESYYVSICGLIENSKDLFMRD-IRMLPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVKFVSIDKCKEENGGPYKASIPLSQATSPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVNGWI 723
            L  P ++ +  PR  ++++    PFN E P S L    ++T  +  Y RNHG +P    DDI  +   I GL+EN   + +RD I    +     T  CAGNRR   + VR  KG  W  + +  A+W+G  + D+L         +  + G ++V F   DK      G Y  SI L+    P   V++A++MNG PL  DHG P+R+V+PG IG RS+  W+
Sbjct:   83 LKTPDNFVERDPR--LIRLTGVHPFNVEAPLSDLYDEGFLTSENLHYVRNHGHVPRCEDDDILDWEFEISGLVENPIKMNVRDLINDYQQLTYPVTFVCAGNRRKEQNIVRKTKGFSWGPAGLSTALWTGVAIGDLLS-------AAKPKRGARYVCFEGADKLPN---GYYGTSIKLNWCMDPNRGVMVAHKMNGNPLPPDHGKPVRIVIPGQIGGRSIK-WL 293          
BLAST of FC923141 vs. ExPASy Swiss-Prot
Match: NIA1_SOYBN (Inducible nitrate reductase [NADH] 1 OS=Glycine max GN=INR1 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.275e-28
Identity = 76/231 (32.90%), Postives = 110/231 (47.62%), Query Frame = 1
Query:   37 EEEASTMPGLTAPSSYSQEPPRHPILQINSKEPFNAEPPRSALIS-SYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFMRDI-RMLPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVKFVSIDKCKEENGGPYKASIPLSQATSPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVNGWI 723
            E EAS +      ++    P    +++   K PFN E P   L+   ++TP    Y RNHGP+P +   + + V + GL++ S    M  + R  P     ATL CAGNRR   + V+   G  W  +    +VW G  L  VL+  GI         G  +V F   +      G  Y  S+    A  P  D++LA+  NGEPL  DHG+P+R+++PG IG R V  W+
Sbjct:   61 ETEASLLDPRDEGTADQWIPRNASMVRFTGKHPFNGEGPLPRLMHHGFITPSPLRYVRNHGPVPKIK-WDEWTVEVTGLVKRSTHFTMEKLMREFPHREFPATLVCAGNRRKEHNMVKQSIGFNWGAAGGSTSVWRGVPLRHVLKRCGI----LARMKGAMYVSFEGAEDLPGGGGSKYGTSVKREMAMDPSRDIILAFMQNGEPLAPDHGFPVRMIIPGFIGGRMVK-WL 285          
The following BLAST results are available for this feature:
BLAST of FC923141 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
NIA2_HORVU1.153e-2935.07Nitrate reductase [NADH] (Fragment) OS=Hordeum vul... [more]
NIA3_MAIZE1.506e-2937.32Nitrate reductase [NADH] 3 OS=Zea mays PE=3 SV=1[more]
NIA_NEUCR2.570e-2933.78Nitrate reductase [NADPH] OS=Neurospora crassa GN=... [more]
NIA1_TOBAC3.356e-2934.30Nitrate reductase [NADH] 1 OS=Nicotiana tabacum GN... [more]
NIA1_BRANA3.356e-2935.27Nitrate reductase [NADH], clone PBNBR1405 OS=Brass... [more]
NIA1_PHAVU4.383e-2932.79Nitrate reductase [NADH] 1 OS=Phaseolus vulgaris G... [more]
NIA1_ARATH5.725e-2935.27Nitrate reductase [NADH] 1 OS=Arabidopsis thaliana... [more]
NIA_SPIOL7.477e-2934.58Nitrate reductase [NADH] OS=Spinacia oleracea GN=N... [more]
NIA_FUSOX9.765e-2934.38Nitrate reductase [NADPH] OS=Fusarium oxysporum GN... [more]
NIA1_SOYBN1.275e-2832.90Inducible nitrate reductase [NADH] 1 OS=Glycine ma... [more]

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Properties
Property NameValue
Genbank descriptionC31701E07EF StrClemenN Citrus clementina cDNA clone C31701E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923141 ID=FC923141; Name=FC923141; organism=Citrus clementina; type=EST; length=737bp
GAAACTTAAGAAAGCTTTCGACTCCAGTGAAGGAGAGAAGAAGAAGCTTC
GACTATGCCGGGACTAACAGCACCATCAAGTTACTCTCAAGAGCCGCCTC
GTCATCCTATCCTTCAAATTAATTCCAAGGAACCATTCAATGCGGAGCCG
CCGCGGTCGGCCTTGATTTCATCTTACGTGACGCCTGTTGATTTTTTCTA
CAAGAGAAATCATGGCCCAATTCCGATAGTTGATGATATTGAAAGCTATT
ATGTCTCAATATGTGGTTTAATTGAAAATTCCAAAGACCTGTTTATGAGG
GATATTCGGATGCTCCCAAAATACAACATCACTGCCACTTTGCAGTGTGC
GGGTAACCGAAGGACAGCGATGAGCAATGTCAGAACGGTGAAGGGAGTTG
GCTGGGATGTTTCTGCTATAGGAAATGCTGTCTGGAGTGGTGCCAAATTG
GCTGATGTTCTTGAACTGGTTGGGATACCAAACTTGACAAGTGTCACTAG
GTCAGGTGGAAAACATGTTAAATTTGTAAGCATTGACAAGTGTAAGGAGG
AGAATGGGGGTCCATATAAAGCATCAATTCCACTTAGTCAAGCTACAAGC
CCAGAAGCTGATGTTTTACTTGCGTATGAGATGAATGGAGAGCCTCTTAA
TAGAGATCATGGTTATCCTCTTCGGGTAGTTGTACCGGGTGTTATAGGTG
CTCGTTCTGTCAATGGGTGGATACCATCACATCCTTG
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