FC923141

Overview
NameFC923141
Unique NameFC923141
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length737
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923141 vs. ExPASy Swiss-Prot
Match: NIA2_TOBAC (Nitrate reductase [NADH] 2 OS=Nicotiana tabacum GN=NIA2 PE=2 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 1.666e-28
Identity = 70/207 (33.82%), Postives = 105/207 (50.72%), Query Frame = 1
Query:  109 ILQINSKEPFNAEPPRSALIS-SYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFMRD-IRMLPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVKFVSIDKCKEENGGPYKASIPLSQATSPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVNGWI 723
            ++++  K PFN+EPP + L+   ++TPV   Y RNHGP+P     + + V + GL++      M   +   P   +  TL CAGNRR   + V+   G  W  +A+   +W G  L  +L+  G+ +       G  +V F   D      G  Y  SI    A  P  D+++AY  NGE L  DHG+P+R+++PG IG R V  WI
Sbjct:  103 MIRLTGKHPFNSEPPLNRLMHHGFITPVPLHYVRNHGPVP-KGTWDDWTVEVTGLVKRPMKFTMDQLVNEFPCRELPVTLVCAGNRRKEQNMVKQTIGFNWGAAAVSTTIWRGVPLRALLKRCGVFS----KNKGALNVCFEGADVLPGGGGSKYGTSIKKEFAMDPARDIIVAYMQNGEKLAPDHGFPVRMIIPGFIGGRMVK-WI 303          
BLAST of FC923141 vs. ExPASy Swiss-Prot
Match: NIA_BETVE (Nitrate reductase [NAD(P)H] OS=Betula verrucosa GN=NIA1 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.711e-28
Identity = 70/207 (33.82%), Postives = 104/207 (50.24%), Query Frame = 1
Query:  109 ILQINSKEPFNAEPPRSALIS-SYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFM-RDIRMLPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVKFVSIDKCKEENGGPYKASIPLSQATSPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVNGWI 723
            ++++  K PFN+E P + L+   ++TP    Y RNHGP+P     E + V +CGL++      M R +          TL CAGNRR   + V+   G  W  + +  +VW G  L DVL+  GI +       G  +V F   +      G  Y  S+    A  P  D++L Y  NGE L+ DHG+P+R+++PG IG R V  W+
Sbjct:  100 MVRLTGKHPFNSEAPLTRLMHHGFITPAPLHYVRNHGPVPKAR-WEDWSVEVCGLVKRPARFTMDRLVTEFRSREFPVTLVCAGNRRKEQNMVKKTIGFNWGAAGVSTSVWRGVPLRDVLKRCGIFS----RGRGAFNVCFEGAEDLPGGGGSKYGTSVKYEMAMDPARDIILGYMQNGERLSPDHGFPVRMIIPGFIGGRMVK-WL 300          
BLAST of FC923141 vs. ExPASy Swiss-Prot
Match: NIA_LEPMC (Nitrate reductase [NADPH] OS=Leptosphaeria maculans GN=NIAD PE=3 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 4.846e-28
Identity = 78/216 (36.11%), Postives = 118/216 (54.63%), Query Frame = 1
Query:   97 PRHP-ILQINSKEPFNAEPPRSALISS-YVTPVDFFYKRNHGPIPIVDDIE--SYYVSICGLIENSKDLFMRDIRMLPKY-NIT--ATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVKFVSIDKCKEENGGPYKASIPLSQATSPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVNGWI 723
            PR P ++++    PFN EPP + L +  ++T  + FY RNHG +P V D E   +  SI G++ N   + +R  ++L +Y N+T   TL CAGNRR   + VR  KG  W  + +  A+++G  + DV+E               +  K+V ++   +   G Y  S+ L+    P   ++LA++MNGE L+ DHG PLR VVPG IG RSV  W+
Sbjct:   82 PRDPRLIRLTGVHPFNTEPPLTDLYNEGFLTSPELFYVRNHGAVPEVQDEECLDWEFSIEGMVANPLKITLR--QLLEEYENVTYPVTLVCAGNRRKEQNVVRKSKGFAWGAAGVSTALFTGVVMKDVIERA----------KPLRKAKYVCMEGADKLPNGYYGTSVKLNWVMDPNRGIMLAHKMNGENLSLDHGKPLRAVVPGQIGGRSVK-WL 284          
BLAST of FC923141 vs. ExPASy Swiss-Prot
Match: NIA_USTMA (Nitrate reductase [NADPH] OS=Ustilago maydis GN=NAR1 PE=2 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 8.266e-28
Identity = 82/256 (32.03%), Postives = 128/256 (50.00%), Query Frame = 1
Query:   25 Q*RREEEASTMPGLTA-----PSSYSQEPPRHPI------LQINSKEPFNAEPPRSALISS-YVTPVDFFYKRNHGPIPIV--DDIESYYVSICGLIENSKDLFMRDIR-MLPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLE--------LVGIPNLTSVTRSGGKHVKFVSIDKCKEENGGPYKASIPLSQATSPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVNGWI 723
            Q R++   + +P + A     P +     P H I      +++  K PFN+E P S L S  ++TP + FY R+HG  P V  +  E++ + + GL+E   +L ++D++   P   +  TL CAGNRR   + V    G  W  + +   +++G  LAD+L+        L   P+         +HV F   D+  +   G Y  S  L+ A      +L+A+ +NGE L+ DHGYPLR+VVPG IG R V  W+
Sbjct:   62 QPRKDYNENVLPAIPATEAVQPLTSDANTPDHWIARDERMIRLTGKHPFNSEAPLSELFSKGFLTPQNLFYVRSHGDTPRVTREQAENWKLKVHGLVEQEVELSIKDLKEKFPTVTLPITLVCAGNRRKEQNMVAKGLGFNWGAAGVSTGLFTGVYLADILDYCKPKNPLLSSFPSYDVAVPGRARHVVFEGADELPK---GKYGTSQRLNWALDRCKGMLIAWGLNGEDLSPDHGYPLRLVVPGQIGGRMVK-WL 313          
BLAST of FC923141 vs. ExPASy Swiss-Prot
Match: NIA_CUCMA (Nitrate reductase [NADH] OS=Cucurbita maxima PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.080e-27
Identity = 70/207 (33.82%), Postives = 107/207 (51.69%), Query Frame = 1
Query:  109 ILQINSKEPFNAEPPRSALIS-SYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFMRDIRMLPKYN-ITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVKFVSIDKCKEENGGPYKASIPLSQATSPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVNGWI 723
            ++++  K PFN+EPP + L+   ++TPV   Y RNHG +P     + + V +CGL++      M  +    ++    ATL CAGNRR   + V+   G  W  + +  +VW    L D+L+  GI +     + G  +V F   +      G  Y  SI    A  P  D++LAY  NGE L  DHG+P+R+++PG IG R V  W+
Sbjct:  115 MVRLTGKHPFNSEPPLNRLMHHGFITPVPLHYVRNHGVVPKAKWAD-WTVEVCGLVKRPAKFTMDQLLNEFRFREFPATLVCAGNRRKEQNMVKQSIGFNWGAAGVSTSVWRRVPLCDLLKRCGILS----RKKGALNVCFEGAEDLPGGGGSKYGTSIKKELAMDPARDIILAYMQNGEQLAPDHGFPVRMIIPGFIGGRMVK-WL 315          
BLAST of FC923141 vs. ExPASy Swiss-Prot
Match: NIA2_ARATH (Nitrate reductase [NADH] 2 OS=Arabidopsis thaliana GN=NIA2 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.998e-27
Identity = 81/246 (32.93%), Postives = 119/246 (48.37%), Query Frame = 1
Query:   34 REEEASTMPGLTAP-SSYSQEP--PRHP-ILQINSKEPFNAEPPRSALIS-SYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFMRDIRMLPKYN-ITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVKFVSIDKCKEEN----------GGPYKASIPLSQATSPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVNGWI 723
            R+  A   P +  P   Y+ +    R+P ++++  K PFN+E P + L+   ++TPV   Y RNHG +P     E + V + G ++      M  +     Y    ATL CAGNRR   + V+  KG  W  + +  +VW G  L DVL   GI      +R GG      +++ C E +          G  Y  SI    A  P  D++LAY  NGE L  DHG+P+R+++PG IG R V  W+
Sbjct:   82 RKSNAELEPSVLDPRDEYTADSWIERNPSMVRLTGKHPFNSEAPLNRLMHHGFITPVPLHYVRNHGHVPKAQWAE-WTVEVTGFVKRPMKFTMDQLVSEFAYREFAATLVCAGNRRKEQNMVKKSKGFNWGSAGVSTSVWRGVPLCDVLRRCGI-----FSRKGG------ALNVCFEGSEDLPGGAGTAGSKYGTSIKKEYAMDPSRDIILAYMQNGEYLTPDHGFPVRIIIPGFIGGRMVK-WL 314          
BLAST of FC923141 vs. ExPASy Swiss-Prot
Match: NIA_VOLCA (Nitrate reductase [NADH] OS=Volvox carteri GN=NITA PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 9.140e-27
Identity = 73/222 (32.88%), Postives = 112/222 (50.45%), Query Frame = 1
Query:   73 PSSYSQEPPRHPILQINSKEPFNAEPPRSALIS-SYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFMRDIRMLPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVKFVSIDKCKEE----NGGPYKASIPLSQATSPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVNGWI 723
            P ++ +  PR  IL++  + P N EPP   L+   ++TP    + RNHG  P +   E + + I GL++    L M ++  LP      TL CAGNRR   + ++   G  W   A     W+G +L D+L L GI       +S  +   FV     K E    + G Y  S+  ++A  P +DV++AY+ N   L  DHG+P+R+++PG IG R V  W+
Sbjct:   50 PDNWVRRDPR--ILRLTGRHPLNCEPPMDVLMEYGFITPPAVHFVRNHGAAPRIPWAE-HRIEINGLVDKPLFLTMDELVALPSITFPCTLVCAGNRRKEENMLKKSIGFNWGPCATSTTYWTGVRLRDLLLLAGI-------KSPEQGANFVCFRGPKGELPRGSDGSYGTSLTYAKAMDPSSDVIIAYKQNHRWLTPDHGFPVRMIIPGFIGGRMVK-WL 260          
BLAST of FC923141 vs. ExPASy Swiss-Prot
Match: NIA_BEABA (Nitrate reductase [NADPH] OS=Beauveria bassiana GN=NIA PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.036e-26
Identity = 71/224 (31.70%), Postives = 114/224 (50.89%), Query Frame = 1
Query:   64 LTAPSSYSQEPPRHPILQINSKEPFNAEPPRSALISS-YVTPVDFFYKRNHGPIPIVDDIES--YYVSICGLIENSKDLFMRD-IRMLPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVKFVSIDKCKEENGGPYKASIPLSQATSPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVNGWI 723
            L  P       PR  ++++    PFN EPP + L    ++   +  Y RNHGP+P   D ES  +  ++ GL+E    + +RD I+   ++    TL CAGNRR   + VR  KG  W  + +  A+W+G  +  +L +       +  +   K+V F   DK      G Y  S+ L+        +++A++MNG+ L+ DHG P+R+++PG IG RSV  W+
Sbjct:   73 LKTPDHRVNRDPR--LIRLTGVHPFNVEPPLTDLYDEGFLNSENLHYVRNHGPVPHCPDDESLNWTFTVDGLVEKPFTIAVRDLIQKYDQFTYPVTLVCAGNRRKEQNVVRKSKGFSWGAAGLSTALWTGVPIGALLRM-------AKPKRAAKYVCFEGADKLPN---GYYGTSVKLNWCMDENRGIMVAHKMNGQSLHPDHGKPVRIIIPGQIGGRSVK-WL 283          
BLAST of FC923141 vs. ExPASy Swiss-Prot
Match: NIA_PHYIN (Nitrate reductase [NADPH] OS=Phytophthora infestans GN=NIAA PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.924e-26
Identity = 72/213 (33.80%), Postives = 112/213 (52.58%), Query Frame = 1
Query:   97 PRHP-ILQINSKEPFNAEPPRSALISSYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFMRD-IRMLPKYNIT--ATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVKFVSIDKCKEENGGPYKASIPLSQATSPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVNGWI 723
            PRHP ++++  + PFN+EPP     S+++TP+   Y RNHGP+P ++  +++  SI GL++  +   M + +    +  +T    L CAGNRR   + ++   G  W  +    A W+G  L  +L   G      V R   + V F  I+    +    Y   I  S    PE DVL+A++ NGE L  DHG+P+R++VPG IG R V  W+
Sbjct:   97 PRHPELIRLTGRHPFNSEPPLK-YASTFITPMALHYVRNHGPVPRLE-WDTHTFSIDGLVKKPRTFGMNELVTTFEQETVTFPVLLVCAGNRRKEQNMIKKTIGFSWGAAGCSTAEWTGVPLHVLLTACG------VDREKAQWVWFEGIEDLPHDK---YGTCIRASTELDPECDVLVAWKANGELLGPDHGFPVRLIVPGHIGGRMVK-WL 297          
The following BLAST results are available for this feature:
BLAST of FC923141 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
NIA2_TOBAC1.666e-2833.82Nitrate reductase [NADH] 2 OS=Nicotiana tabacum GN... [more]
NIA_BETVE3.711e-2833.82Nitrate reductase [NAD(P)H] OS=Betula verrucosa GN... [more]
NIA_LEPMC4.846e-2836.11Nitrate reductase [NADPH] OS=Leptosphaeria maculan... [more]
NIA_USTMA8.266e-2832.03Nitrate reductase [NADPH] OS=Ustilago maydis GN=NA... [more]
NIA_CUCMA1.080e-2733.82Nitrate reductase [NADH] OS=Cucurbita maxima PE=2 ... [more]
NIA2_ARATH6.998e-2732.93Nitrate reductase [NADH] 2 OS=Arabidopsis thaliana... [more]
NIA_VOLCA9.140e-2732.88Nitrate reductase [NADH] OS=Volvox carteri GN=NITA... [more]
NIA_BEABA2.036e-2631.70Nitrate reductase [NADPH] OS=Beauveria bassiana GN... [more]
NIA_PHYIN5.924e-2633.80Nitrate reductase [NADPH] OS=Phytophthora infestan... [more]

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Properties
Property NameValue
Genbank descriptionC31701E07EF StrClemenN Citrus clementina cDNA clone C31701E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923141 ID=FC923141; Name=FC923141; organism=Citrus clementina; type=EST; length=737bp
GAAACTTAAGAAAGCTTTCGACTCCAGTGAAGGAGAGAAGAAGAAGCTTC
GACTATGCCGGGACTAACAGCACCATCAAGTTACTCTCAAGAGCCGCCTC
GTCATCCTATCCTTCAAATTAATTCCAAGGAACCATTCAATGCGGAGCCG
CCGCGGTCGGCCTTGATTTCATCTTACGTGACGCCTGTTGATTTTTTCTA
CAAGAGAAATCATGGCCCAATTCCGATAGTTGATGATATTGAAAGCTATT
ATGTCTCAATATGTGGTTTAATTGAAAATTCCAAAGACCTGTTTATGAGG
GATATTCGGATGCTCCCAAAATACAACATCACTGCCACTTTGCAGTGTGC
GGGTAACCGAAGGACAGCGATGAGCAATGTCAGAACGGTGAAGGGAGTTG
GCTGGGATGTTTCTGCTATAGGAAATGCTGTCTGGAGTGGTGCCAAATTG
GCTGATGTTCTTGAACTGGTTGGGATACCAAACTTGACAAGTGTCACTAG
GTCAGGTGGAAAACATGTTAAATTTGTAAGCATTGACAAGTGTAAGGAGG
AGAATGGGGGTCCATATAAAGCATCAATTCCACTTAGTCAAGCTACAAGC
CCAGAAGCTGATGTTTTACTTGCGTATGAGATGAATGGAGAGCCTCTTAA
TAGAGATCATGGTTATCCTCTTCGGGTAGTTGTACCGGGTGTTATAGGTG
CTCGTTCTGTCAATGGGTGGATACCATCACATCCTTG
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