FC923144
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923144 vs. ExPASy Swiss-Prot
Match: EIF3H_DROMO (Eukaryotic translation initiation factor 3 subunit H OS=Drosophila mojavensis GN=eIF-3p40 PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.965e-33 Identity = 79/198 (39.90%), Postives = 117/198 (59.09%), Query Frame = 2 Query: 56 AAAEEVAPPLRVVQIEGLVMLKIIKHCKEFSPA--LVTGQLLGLDVGSVLEVTNCFPFPIQEEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTMLGCFQTAELIETFLNYQENIRRCVCIIYDPSRSNQGALAFKALKLSDSFMDLYRSNNFTGEKLREKNLSWVDIFEEIPVKVSNSALISAFMTELEPDTP 643 A E+ + VQ +GL ++K+IKHC E S L G LLGL V LE+TNCFPFP + DE ++ + YQL +MR LR VNVD+ VGWYQS+ +G + L+E+ +YQ +I V ++YD +S++G L KA +L+ + +Y+ +FT E R + + +F EIP+ + NS L + M+EL P Sbjct: 9 ARNEDSENTINYVQCDGLAVMKMIKHCHEESSNMDLAQGALLGLVVDKCLEITNCFPFP-KSGDETMDEE--MYQLTVMRRLRRVNVDHLHVGWYQSSDVGNSLSLALLESQYHYQTSIEESVVVVYDTQKSSRGFLCLKAYRLTPQAIQMYKDGDFTPEAFRTLKVGYESLFAEIPIVIKNSPLTNIMMSELNELLP 203
BLAST of FC923144 vs. ExPASy Swiss-Prot
Match: EIF3H_DROPS (Eukaryotic translation initiation factor 3 subunit H OS=Drosophila pseudoobscura pseudoobscura GN=eIF-3p40 PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.106e-32 Identity = 78/198 (39.39%), Postives = 116/198 (58.59%), Query Frame = 2 Query: 56 AAAEEVAPPLRVVQIEGLVMLKIIKHCKEFSPA--LVTGQLLGLDVGSVLEVTNCFPFPIQEEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTMLGCFQTAELIETFLNYQENIRRCVCIIYDPSRSNQGALAFKALKLSDSFMDLYRSNNFTGEKLREKNLSWVDIFEEIPVKVSNSALISAFMTELEPDTP 643 A E+ + VQ +GL ++K++KHC E S L G LLGL V LE+TNCFPFP + DE ++ + YQL +MR LR VNVD+ VGWYQS+ +G + L+E+ +YQ +I V ++YD +S +G L KA +L+ + +Y+ +FT E R + + +F EIP+ + NS L + M+EL P Sbjct: 9 ARTEDSDNTINYVQCDGLAVMKMVKHCHEESSNMDLAQGALLGLVVDKCLEITNCFPFP-KSGDETMDEE--MYQLTVMRRLRRVNVDHLHVGWYQSSDVGNSLSLALLESQYHYQTSIEESVVVVYDTQKSARGFLCLKAYRLTPQAIQMYKDGDFTPEAFRTLKVGYESLFAEIPIVIKNSPLTNIMMSELNELLP 203
BLAST of FC923144 vs. ExPASy Swiss-Prot
Match: EIF3H_YARLI (Eukaryotic translation initiation factor 3 subunit H OS=Yarrowia lipolytica GN=YALI0F16005g PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 5.138e-30 Identity = 80/234 (34.19%), Postives = 124/234 (52.99%), Query Frame = 2 Query: 92 VQIEGLVMLKIIKHCKEFSPALVTGQLLGLDVGSVLEVTNCFPFPIQEEDEEIEADG---------ANYQLEMMRCLREVNVDNNTVGWYQSTMLGCFQTAELIETFLNYQENIRRCVCIIYDPSRSN------------QG-------ALAFKALKLSDSFMDLYRSNNFTGEKLREKNLSWVDIFEEIPVKVSNSALISAFMTEL---EPDTPVTQRDYDPPALSSSPFLER 700 V I+ V LKI++HC+E +P++V GQLLGLDV L +++ F FP +D A YQ EM+ L+EVNVD+N+VGWYQST+LG A +IE +QE V ++YD + S QG +A +LS+ ++++ +S F L E NL++ D+ E+PV++ NS L + + +L P++P + + +S PFLE+ Sbjct: 6 VCIDSSVALKIVRHCQESAPSIVAGQLLGLDVDGELRISHAFAFPQNAAGGNPNSDDGLSLRLKAVAKYQPEMIDHLKEVNVDSNSVGWYQSTVLGRIYNASVIENLAVFQEKNPDSVVLVYDVAGSEVVSDTDPSSTGPQGHTTTTPSGFNLRAFRLSEEYLNVRKSGKFDTATLTENNLTYHDVLVELPVEIKNSNLATLLLYQLGQQYPNSPFAESSFSNLNVSVDPFLEK 239
BLAST of FC923144 vs. ExPASy Swiss-Prot
Match: EIF3H_CHAGB (Eukaryotic translation initiation factor 3 subunit H OS=Chaetomium globosum GN=CHGG_05046 PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.711e-30 Identity = 78/225 (34.67%), Postives = 117/225 (52.00%), Query Frame = 2 Query: 131 HCKEFSPALVTGQLLGLDVGSVLEVTNCFPFPIQEED--EEIEADGAN-------------YQLEMMRCLREVNVDNNTVGWYQSTMLGCFQTAELIETFLNYQENIRRCVCIIYDPSRSNQGALAFKALKLSDSFMDLYRSNNFTGEKLREKNLSWVDIFEEIPVKVSNSALISAFMTEL-------EPDTPVTQRD-------------YDPPALSSSPFLER 700 HC P TG ++G+D V+E+TN FPFP + + ++D + YQ EM+R L+EVNVD N VGWY S +G F IE +YQ + + V +++D SRS+QGAL+ +A +LS FM ++ FT E L++ L++ DI E+PV V NS L+++F+ ++ E P + D +D LS PFLE+ Sbjct: 28 HCSSSFPTTATGSIVGMDNNGVIEITNAFPFPTVDVSGTDSHQSDATSLAAAAPRAKANIAYQNEMIRHLKEVNVDANNVGWYTSATMGNFINLSFIENQHHYQRDNDKTVALVHDVSRSSQGALSLRAFRLSPEFMAAFKEGKFTTESLQKSKLTFRDILVEVPVVVHNSHLLTSFLHQIPAPPKSAEIPLPASLEDIRRDPAQLPAHPSFDTLDLSIDPFLEK 252
BLAST of FC923144 vs. ExPASy Swiss-Prot
Match: EIF3H_MONBE (Eukaryotic translation initiation factor 3 subunit H OS=Monosiga brevicollis GN=9558 PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 8.764e-30 Identity = 73/215 (33.95%), Postives = 126/215 (58.60%), Query Frame = 2 Query: 83 LRVVQIEGLVMLKIIKHCKEFSPALVTGQLLGLDV---------GSVLEVTNCFPFPIQEEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTMLGCFQTAELIETFLNYQENIRRCVCIIYDPSRSNQGALAFKALKLSDSFMDLYRSNNFTGEKLREKNLSWVDIFEEIPVKVSNSALISAFMTELEPDTPVTQRDYDPPALSSSPFLER 700 ++ V ++ LV++KIIKH +E V G LLGL ++LEVTNCFP P +D++ ++ YQ++MMR LREVNVD+ VGWYQ+ +G F ++ +Q ++ V +IYDP + QG L+ A +LS+ M+L+ +++F + +RE L++ +FE++PV + S++ + EL + ++ +D L+++ F+ R Sbjct: 30 VKQVTVDALVVMKIIKHARENPHEPVRGPLLGLSQLADASKPGEDALLEVTNCFPTPRVSDDDD-DSIVQQYQVQMMRWLREVNVDHMNVGWYQAADMGTFFDEDVAAVQFQHQRHMAESVVLIYDPVLTLQGTLSLSAFRLSNKAMELFSTDSFNPKAVREAGLTYRTVFEKVPVTIRASSMARLLIPELSANLDQSE-IFDRMDLNATSFMSR 242
BLAST of FC923144 vs. ExPASy Swiss-Prot
Match: EIF3H_USTMA (Eukaryotic translation initiation factor 3 subunit H OS=Ustilago maydis GN=UM00199 PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 6.281e-28 Identity = 72/201 (35.82%), Postives = 112/201 (55.72%), Query Frame = 2 Query: 92 VQIEGLVMLKIIKHCKEFSPALVTGQLLGLDVGSVLEVTNCFPFP-----IQEEDEEIEADGAN---YQLEMMRCLREVNVDNNTVGWYQSTMLGCFQTAELIETFLNYQENIRR--------CVCIIYDPSRSNQGALAFKALKLSDSFMDLYRSNNFTGEKLREKNLSWVDIFEEIPVKVSNSALISAFMTELE-PDTP 643 V+++GL + KI+KHC++ PA +G LLG+D+G LE++N F P E DEE + N Y +M+R LR+VN D N VG YQ LG F + +I+ + R V I++D ++S QG + KA +LS SF+D ++ F + L + L++ +I EIPV + N+AL+ AF++ + P P Sbjct: 57 VRLDGLALTKIVKHCRDAHPASASGALLGMDLGGTLEISNVFALPNPGRSNSERDEEEDRSSRNATRYTSDMVRLLRDVNADANPVGLYQGCFLGAFLNSSVIDGLAAITGLVERDGAGSRGKGVLIVHDLAQSAQGNTSVKAYRLSPSFVDAHKKGKFHTQSLIDHKLTFSNILIEIPVSLRNTALLDAFLSSISTPSAP 257
BLAST of FC923144 vs. ExPASy Swiss-Prot
Match: EIF3H_CAEEL (Eukaryotic translation initiation factor 3 subunit H OS=Caenorhabditis elegans GN=eif-3.H PE=2 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 2.731e-23 Identity = 66/203 (32.51%), Postives = 113/203 (55.67%), Query Frame = 2 Query: 74 APPLRVVQIEGLVMLKIIKHC--------KEFSPALVTGQLLGLDV--GSVLEVTNCFPF----PIQEED----EEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTMLGCFQTAELIETFLNYQENIRRCVCIIYDPSRSNQGALAFKALKLSDSFMDLYRSNNFTGEKLREKNLSWVDIFEEIPVKVSNSALISAFMTEL 628 AP ++ + ++ LV++KI+KH E S G L GL S LE+TNCFP P+ ++D ++ E + L+M+R R +N+D VG+YQS G + +L+E+ +YQ V +IYDP ++ QG L+ +A +LS + +DL N++ E ++ L++ ++FEE+P+ + +S L + M+EL Sbjct: 9 APSVKHILLDSLVVMKIVKHVDSELHAGISEVSGDACAGVLTGLVFLEDSRLEITNCFPTVRNEPVMDDDANAAQQYEEQKQHEMLDMLRKFRTMNIDYEIVGFYQSHQFGAGFSHDLVESMFDYQAMGPENVVLIYDPIKTRQGQLSLRAWRLSTAALDLASKNDWRPELVKAAGLTYQNMFEELPIIIKSSYLNNVLMSEL 211
BLAST of FC923144 vs. ExPASy Swiss-Prot
Match: EIF3H_CAEBR (Eukaryotic translation initiation factor 3 subunit H OS=Caenorhabditis briggsae GN=eif-3.H PE=3 SV=3) HSP 1 Score: 107.842 bits (268), Expect = 6.084e-23 Identity = 66/203 (32.51%), Postives = 112/203 (55.17%), Query Frame = 2 Query: 74 APPLRVVQIEGLVMLKIIKHC--------KEFSPALVTGQLLGLDV--GSVLEVTNCFPF----PIQEED----EEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTMLGCFQTAELIETFLNYQENIRRCVCIIYDPSRSNQGALAFKALKLSDSFMDLYRSNNFTGEKLREKNLSWVDIFEEIPVKVSNSALISAFMTEL 628 AP ++ + ++ LV++KI+KH E S G L GL S LE+TNCFP P+ ++D ++ E L+M+R R +N+D VG+YQS G + +L+E+ +YQ V +IYDP ++ QG L+ +A +LS + +DL N++ E ++ L++ ++FEE+P+ + +S L + M+EL Sbjct: 9 APSVKHILLDSLVVMKIVKHVDSELHAGISEVSGDACAGVLTGLVFLEDSRLEITNCFPTVRNEPVIDDDANAAQQYEEQKQQEMLDMLRKFRTMNIDYEIVGFYQSHQFGAGFSHDLVESMFDYQAMGPENVVLIYDPIKTRQGQLSIRAWRLSTAALDLASKNDWRPELVKSAGLTYQNMFEELPIIIKSSYLNNVLMSEL 211
BLAST of FC923144 vs. ExPASy Swiss-Prot
Match: EIF3H_BRUMA (Eukaryotic translation initiation factor 3 subunit H OS=Brugia malayi GN=Bm1_50170 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.019e-22 Identity = 65/204 (31.86%), Postives = 113/204 (55.39%), Query Frame = 2 Query: 83 LRVVQIEGLVMLKIIKHCK------------EFSPALVTGQLLGLDVGSVLEVTNCFPFPIQE---EDEEIEADGANYQ-------LEMMRCLREVNVDNNTVGWYQSTMLGCFQTAELIETFLNYQENIRRCVCIIYDPSRSNQGALAFKALKLSDSFMDLYRSNNFTGEKLREKNLSWVDIFEEIPVKVSNSALISAFMTEL 628 ++ VQI+ LV++KI+KH E L+TG L+ +D LE+TNCFP E + +EI + A Y+ L+M+R R++N+D VG+YQ+ G E I++ ++YQ ++ V +IYDP ++ QG L+ +A +LS +++ +++ E R L++ ++ EE+PV + NS L++ + EL Sbjct: 14 VQFVQIDSLVVMKIVKHVDSEMYAGLNEVAGEACQGLLTG-LVSID-DRRLEITNCFPTARAEPMLDGDEIAQNNAFYEEQKQAEMLDMLRKFRDMNIDYELVGFYQAHPFGACFAQETIDSLIDYQASVPDGVVLIYDPVKTRQGQLSIRAYRLSTKALEMSLDGDWSPESTRTAGLTYENMLEELPVVIKNSHLVNVMLAEL 215
BLAST of FC923144 vs. ExPASy Swiss-Prot
Match: EIF3H_SCHPO (Eukaryotic translation initiation factor 3 subunit H OS=Schizosaccharomyces pombe GN=eif3h PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.338e-21 Identity = 60/202 (29.70%), Postives = 106/202 (52.48%), Query Frame = 2 Query: 74 APPLRVVQIEGLVMLKIIKHCKEFSPALVT-GQLLGLDVGSVLEVTNCFPFPIQEEDEEIEADGA-------NYQLEMMRCLREVNVDNNTVGWYQSTMLGCFQTAEL-IETFLNYQENIRRCVCIIYDPSRSNQGALAFKALKLSDSFMDLYRSNNFTGEKLREKNLSWVDIFEEIPVKVSNSALISAFMTEL-EPDTPVT 649 +PP+ V++E L+++ IIKHC++ P + T GQL+G+D+ VL+V++ F P E+EE + + + M+ L+ + VGWY + F ++ +ET YQ+ + +YD S+S+ G L +A +L+ FM + +T L NL+ ++ E+P+ + NS L + + L EP TP + Sbjct: 14 SPPIERVELESLLVMNIIKHCRDSFPNMGTIGQLVGIDIDGVLQVSSSFESPSVLENEESAVNKSVSGKARQAHTEAMLNRLQYIGAVTGHVGWYLGAYVSSFLSSPFFVETQYAYQKANPNSIAFLYDLSQSSNGTLYMRAYQLTPEFMAAHEEKTWTASSLNSHNLTPSNVIRELPIVIHNSHLATCLLHSLSEPPTPAS 215 The following BLAST results are available for this feature:
BLAST of FC923144 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923144 ID=FC923144; Name=FC923144; organism=Citrus clementina; type=EST; length=735bpback to top |