FC923149

Overview
NameFC923149
Unique NameFC923149
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length746
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923149 vs. ExPASy Swiss-Prot
Match: TRPE_YEAST (Anthranilate synthase component 1 OS=Saccharomyces cerevisiae GN=TRP2 PE=1 SV=4)

HSP 1 Score: 119.783 bits (299), Expect = 1.595e-26
Identity = 69/201 (34.33%), Postives = 112/201 (55.72%), Query Frame = 1
Query:   67 PTVSRNKSAFISEVSRGDYVNNVENCLKYIKDGESYELCLTTQLRKRIGEIDSLGLYLHLREKNPAPYAAWLSFSKEDLCICCSSPERFLRLDKNDLLEAKPIKGTIARGSTPEEDEQLKLQLQYSEKDQAENLMIVDLLRNDLGRVCEPGSVHVPNLMNVESYATVHTMVSTICGKKHSNVSAVYCVRAAFPGGSMTGAP 669
            P +  N++ F S V +  Y N+V    K+IK G+  +  + +Q   R   +    +Y HLR  NP+PY  ++     D  I  +SPE   + D  + +   PI GT+ RG+T EED+ L  QL+ S KD+AE++M+VDL RND+ R+C+P +  V  L+ ++ ++ V  +VS + G      +     R+ FP G+++GAP
Sbjct:  216 PPIKLNQT-FESNVGKEGYENHVSTLKKHIKKGDIIQ-GVPSQRVARPTSLHPFNIYRHLRTVNPSPYLFYIDCL--DFQIIGASPELLCKSDSKNRVITHPIAGTVKRGATTEEDDALADQLRGSLKDRAEHVMLVDLARNDINRICDPLTTSVDKLLTIQKFSHVQHLVSQVSGVLRPEKTRFDAFRSIFPAGTVSGAP 412          
BLAST of FC923149 vs. ExPASy Swiss-Prot
Match: PABB_STRLI (Para-aminobenzoate synthase component 1 OS=Streptomyces lividans GN=pabB PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.595e-26
Identity = 73/188 (38.83%), Postives = 109/188 (57.98%), Query Frame = 1
Query:  121 YVNNVENCLKYIKDGESYELCLTTQLRKRIGEI--DSLGLYLHLREKNPAPYAAWLSFSKEDLCICCSSPERFLRLDKNDLLEAKPIKGTIA---RGSTPEEDEQLKLQLQYSEKDQAENLMIVDLLRNDLGRVCEPGSVHVPNLMNVESYATVHTMVSTICGKKHSNVSAVYCVRAAFPGGSMTGAP 669
            Y + V+    Y+  G+ Y++ L    ++R+G I  +   LY+ LR+ NPAPY A+L     D  +  +SPER + LD+   L+ +PI GT+    R    +ED+   + L   +KD+AE +MIVDL RND+ RV   GSV V  +M +E Y+ V  +VS + G     + AV  +RA FPGG++TGAP
Sbjct:  201 YADGVDRLKDYLGSGDMYQVNLA---QRRVGMISAEDYQLYIRLRDANPAPYMAYLDI---DEGLLVASPERII-LDEASDLDTRPIAGTLRGRPRAGGDDEDDGRAIDLLRVDKDRAERIMIVDLDRNDIARVGVGGSVKVREIMGLERYSGVMHLVSQVTGDLQEAIEAVDLIRAGFPGGTLTGAP 381          
BLAST of FC923149 vs. ExPASy Swiss-Prot
Match: TRPE1_HALSA (Anthranilate synthase component 1 1 OS=Halobacterium salinarium GN=trpE1 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.083e-26
Identity = 70/186 (37.63%), Postives = 106/186 (56.99%), Query Frame = 1
Query:  112 RGDYVNNVENCLKYIKDGESYELCLTTQLRKRIGEIDSLGLYLHLREKNPAPYAAWLSFSKEDLCICCSSPERFLRLDKNDLLEAKPIKGTIARGSTPEEDEQLKLQLQYSEKDQAENLMIVDLLRNDLGRVCEPGSVHVPNLMNVESYATVHTMVSTICGKKHSNVSAVYCVRAAFPGGSMTGAP 669
            R  Y + VE     ++DGE Y+  + ++ R+  G+ID   LY  LR  NP+PY   L+    D  +  +SPE  + +  +D +   PI GT  RG++P  D +L  ++   EK++AE+ M+VDL RND+ RV  PG+V VP  M V  Y+ V  + ST+ G   ++  A    RAAFP G+++GAP
Sbjct:  248 RDAYTDAVETAATAVRDGEVYQ-AVVSRTRELDGDIDPRALYDALRAVNPSPYMFLLAHG--DHTVVGASPETLVAVH-DDTVVTNPIAGTCQRGASPVADRRLAGEMLADEKERAEHTMLVDLARNDVRRVSAPGTVSVPEFMRVLKYSHVQHIESTVTGTLAADADAFDATRAAFPAGTLSGAP 429          
BLAST of FC923149 vs. ExPASy Swiss-Prot
Match: TRPE_MYCLE (Anthranilate synthase component 1 OS=Mycobacterium leprae GN=trpE PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 7.914e-26
Identity = 73/188 (38.83%), Postives = 110/188 (58.51%), Query Frame = 1
Query:  118 DYVNNVENCLKYIKDGESYELCLTTQLRKRIGEIDSLGLYLHLREKNPAPYAAWLSFSKED----LCICCSSPERFLRLDKNDLLEAKPIKGTIARGSTPEEDEQLKLQLQYSEKDQAENLMIVDLLRNDLGRVCEPGSVHVPNLMNVESYATVHTMVSTICGKKHSNVSAVYCVRAAFPGGSMTGAP 669
            +Y   V++ +  I  GE++++ + +Q  +   ++D + +Y  LR  NP+PY   L     D      I  SSPE  + + K+  +   PI GT  RG T EED+ L+ +L   EK++AE+LM+VDL RNDLGRVC PG+V V +  +VE Y+ V  MVST+ G      +A+  V A FP G+++GAP
Sbjct:  232 EYGAIVDHLVDQIAAGEAFQV-VPSQRFEVDTDVDPIDVYRMLRVTNPSPYMYLLHVPNSDGATGFSIVGSSPEALVTV-KDGRVTTHPIAGTRWRGQTEEEDQLLEKELLADEKERAEHLMLVDLGRNDLGRVCTPGTVRVEDYSHVERYSHVMHMVSTVTGLLGEGRTALDAVTACFPAGTLSGAP 417          
BLAST of FC923149 vs. ExPASy Swiss-Prot
Match: TRPE2_HALSA (Anthranilate synthase component 1 2 OS=Halobacterium salinarium GN=trpE2 PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.034e-25
Identity = 70/201 (34.83%), Postives = 114/201 (56.72%), Query Frame = 1
Query:   67 PTVSRNKSAFISEVSRGDYVNNVENCLKYIKDGESYELCLTTQLRKRIGEIDSLGLYLHLREKNPAPYAAWLSFSKEDLCICCSSPERFLRLDKNDLLEAKPIKGTIARGSTPEEDEQLKLQLQYSEKDQAENLMIVDLLRNDLGRVCEPGSVHVPNLMNVESYATVHTMVSTICGKKHSNVSAVYCVRAAFPGGSMTGAP 669
            P  + + + F S   R  + + V      I+DG++++  ++ +L      +  + ++  LR+ NPAPY+  + F   DL    +SPE  L     +L   +PI GT  RG+TP ED+  +  L+  +K++AE+ M+VDL RNDLG+V E GSV VP+   V++Y+ V  +VS + G+   + S    + A FPGG++TGAP
Sbjct:  195 PPPADSPAPFESVAGRAAFESRVRRIQDAIRDGDTFQANVSHRLDAPAA-VHPVAVFEALRDTNPAPYSGIVEFPGVDLV--SASPELLLARRGRELT-TEPIAGTRPRGATPAEDDAARAALRADDKERAEHAMLVDLERNDLGKVSEYGSVAVPDYRRVDAYSEVLHLVSEVTGRLRDSCSLRDAIAAVFPGGTITGAP 391          
BLAST of FC923149 vs. ExPASy Swiss-Prot
Match: TRPE_SYNY3 (Probable anthranilate synthase component 1 OS=Synechocystis sp. (strain PCC 6803) GN=trpE PE=3 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 6.700e-25
Identity = 75/196 (38.27%), Postives = 109/196 (55.61%), Query Frame = 1
Query:   94 FISEVSRGDYVNNVENCLKYIKDGESYELCLTTQLRKRIGEIDSLGLYLHLREKNPAPYAAWLSFSKEDLCICCSSPERFLR----LDKNDLLEAKPIKGTIARGSTPEEDEQLKLQLQYSEKDQAENLMIVDLLRNDLGRVCEPGSVHVPNLMNVESYATVHTMVSTICGKKHSNVSAVYCVRAAFPGGSMTGAP 669
            + S   +  ++  V     YI  G+ +++ L+ +L   I   D   LY  LR  NP+PY A+ +F      I  SSPE  ++    LD   +   +PI GT  RG T  EDEQL  +L    K+ AE++M+VDL RNDLGRVC  GSV V  LM +E Y+ V  +VS + G+  S+ +A   ++A FP G+++GAP
Sbjct:  227 YSSNTEQEKFLEEVAIAKDYITAGDIFQVVLSQRL-STIYRDDPFKLYRSLRLINPSPYMAYYNFGHWQ--IIGSSPEVMVKADRQLDGKLMATVRPIAGTRPRGKTHPEDEQLAEELLNDPKEIAEHVMLVDLGRNDLGRVCVQGSVKVNELMVIERYSHVMHIVSNVVGELASDKTAWDLLKACFPAGTVSGAP 419          
BLAST of FC923149 vs. ExPASy Swiss-Prot
Match: TRPE_METTM (Anthranilate synthase component 1 OS=Methanobacterium thermoautotrophicum (strain Marburg / DSM 2133) GN=trpE PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.700e-25
Identity = 72/189 (38.10%), Postives = 108/189 (57.14%), Query Frame = 1
Query:  106 VSRGDYVNNVENCLKYIKDGESYELCLTTQLRKRIGEIDSLGLYLHLREKNPAPYAAWLSFSKEDLCICCSSPERFLRLDKNDLLEAKPIKGTIARGSTPEEDEQLKLQLQYSEKDQ-AENLMIVDLLRNDLGRVCEPGSVHVPNLMNVESYATVHTMVSTICGKKHSNVSAVYCVRAAFPGGSMTGAP 669
            +S+  Y++ V    + I++GE ++  L++    R+   D L  Y  LR  NP+PY   L   + +  I  SSPE  +R++   + E  PI GT  RG T EED  +   L   EK+Q AE+LM+VDL RND+GRV E GSV VP  M ++ ++ V  ++S + GK    + AV  + A FP G+++GAP
Sbjct:  186 LSKRRYMDMVLEAKERIREGEIFQAVLSSATDYRLRG-DRLAFYESLRRINPSPYMYHLKLGERE--ITGSSPEMLVRVEDRRI-ETFPIAGTRPRGRTEEEDGVIASDLLSDEKEQLAEHLMLVDLARNDIGRVSEFGSVEVPEYMTIKRFSHVQHILSHVTGKLRDGMDAVDALGAVFPAGTVSGAP 370          
BLAST of FC923149 vs. ExPASy Swiss-Prot
Match: TRPE_BACST (Anthranilate synthase component 1 OS=Bacillus stearothermophilus GN=trpE PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.750e-25
Identity = 70/216 (32.41%), Postives = 120/216 (55.56%), Query Frame = 1
Query:   34 TRQLEEQNLHAPTVSRNKSAFISEVS----RGDYVNNVENCLKYIKDGESYELCLTTQLRKRIGEIDSLGLYLHLREKNPAPYAAWLSFSKEDLCICCSSPERFLRLDKNDLLEAKPIKGTIARGSTPEEDEQLKLQLQYSEKDQAENLMIVDLLRNDLGRVCEPGSVHVPNLMNVESYATVHTMVSTICGKKHSNVSAVYCVRAAFPGGSMTGAP 669
            +R   EQ L        ++A  S+ S    +  ++ +VE   +YI  G+ ++  L+ +    + +     +Y  LR  NP+PY  +  F  + + I  SSPE+ +++ +N   E  PI GT  RG +P EDE+L  +L +  K++AE+ M+VDL RND+GRV + G+V VP LM +  ++ V  ++S + G    ++  +  + AAFP G+++GAP
Sbjct:  202 SRPRAEQPLLPAEDEAERAALFSKASSNYEKEQFLRDVEAVKQYIAAGDVFQAVLSQRFSVPV-QAGGFAIYRILRHINPSPYMFY--FRLDGIEIVGSSPEKLIQV-RNRRAEIDPIAGTRRRGRSPAEDEKLADELYHDPKERAEHYMLVDLARNDIGRVAKYGTVEVPVLMEIGKFSHVMHLISKVVGVLDDDIHPIDALLAAFPAGTVSGAP 413          
BLAST of FC923149 vs. ExPASy Swiss-Prot
Match: PABS_YEAST (Aminodeoxychorismate synthase OS=Saccharomyces cerevisiae GN=ABZ1 PE=1 SV=4)

HSP 1 Score: 114.005 bits (284), Expect = 8.750e-25
Identity = 78/232 (33.62%), Postives = 125/232 (53.88%), Query Frame = 1
Query:   25 SFFTRQLEEQNLHAPTVSRNKSAFISEV-SRGDYVNNVENCLKYIKDGESYELCLTTQLR-KRIGEIDSLGLYLHLREKNPAPYAAWLSFS----KED-----LCICCSSPERFLRLDKNDLLEAKPIKGTIARGSTPEEDEQLKLQLQYSEKDQAENLMIVDLLRNDLGRVCEPGSVHVPNLMNVESYATVHTMVSTI------CGKKHSNVSAVYCVRAAFPGGSMTGAP 669
            SF  ++  +Q+L  P     +  FI  +  + DY    + C  Y+  G+SYE+CLTTQ +      I+   ++  L ++NPAP++++  F     ++D     LC   +SPERFL+ D  D  E +PIKGT+ +G  P+ +     ++  + K+  ENLMI+DL+RNDL  +     V V   M+V+ YATV+ +VS +         K +  S +  ++ + P GSMTGAP
Sbjct:  469 SFVRKKNIKQSLSWPKYLPEEIDFIITMPDKLDYAKAFKKCQDYMHKGDSYEMCLTTQTKVVPSAVIEPWRIFQTLVQRNPAPFSSFFEFKDIIPRQDETPPVLCFLSTSPERFLKWDA-DTCELRPIKGTVKKG--PQMNLAKATRILKTPKEFGENLMILDLIRNDLYELVP--DVRVEEFMSVQEYATVYQLVSVVKAHGLTSASKKTRYSGIDVLKHSLPPGSMTGAP 695          
BLAST of FC923149 vs. ExPASy Swiss-Prot
Match: TRPE_STRCO (Anthranilate synthase component 1 OS=Streptomyces coelicolor GN=trpE PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.143e-24
Identity = 67/202 (33.17%), Postives = 112/202 (55.45%), Query Frame = 1
Query:   64 APTVSRNKSAFISEVSRGDYVNNVENCLKYIKDGESYELCLTTQLRKRIGEIDSLGLYLHLREKNPAPYAAWLSFSKEDLCICCSSPERFLRLDKNDLLEAKPIKGTIARGSTPEEDEQLKLQLQYSEKDQAENLMIVDLLRNDLGRVCEPGSVHVPNLMNVESYATVHTMVSTICGKKHSNVSAVYCVRAAFPGGSMTGAP 669
            A         + + ++   +   V    ++I  G+++++ L+ +L + +       LY HLR  NP+PY   LS       I  +SPE  ++ +   +   +P+ GT  R   P ED +L+ +L+  EK++AE++M+VDL RNDLGRV EPG+V V  LM VE ++ V  + ST+ G+      A+  +R+AFP G+++GAP
Sbjct:  226 ATPADHGTQGWTANLTEAQFTERVARAREHIAAGDAFQIVLSRRLSRPL-RARPTDLYRHLRATNPSPYMYHLSLGGGRHVIG-ASPELLVKAEGRTV-RTRPLAGTRPRHPDPAEDLRLERELRADEKERAEHVMLVDLGRNDLGRVTEPGTVRVERLMRVERFSHVMHLSSTVRGRLAEGRDALDALRSAFPAGTLSGAP 424          
The following BLAST results are available for this feature:
BLAST of FC923149 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 75
Match NameE-valueIdentityDescription
TRPE_YEAST1.595e-2634.33Anthranilate synthase component 1 OS=Saccharomyces... [more]
PABB_STRLI1.595e-2638.83Para-aminobenzoate synthase component 1 OS=Strepto... [more]
TRPE1_HALSA2.083e-2637.63Anthranilate synthase component 1 1 OS=Halobacteri... [more]
TRPE_MYCLE7.914e-2638.83Anthranilate synthase component 1 OS=Mycobacterium... [more]
TRPE2_HALSA1.034e-2534.83Anthranilate synthase component 1 2 OS=Halobacteri... [more]
TRPE_SYNY36.700e-2538.27Probable anthranilate synthase component 1 OS=Syne... [more]
TRPE_METTM6.700e-2538.10Anthranilate synthase component 1 OS=Methanobacter... [more]
TRPE_BACST8.750e-2532.41Anthranilate synthase component 1 OS=Bacillus stea... [more]
PABS_YEAST8.750e-2533.62Aminodeoxychorismate synthase OS=Saccharomyces cer... [more]
TRPE_STRCO1.143e-2433.17Anthranilate synthase component 1 OS=Streptomyces ... [more]

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Properties
Property NameValue
Genbank descriptionC31701F04EF StrClemenN Citrus clementina cDNA clone C31701F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923149 ID=FC923149; Name=FC923149; organism=Citrus clementina; type=EST; length=746bp
AGAACAGAAGCTTATTGGCTTAAGAGCTTCTTCACAAGGCAGTTGGAGGA
GCAGAATTTACATGCTCCAACAGTTTCTCGAAATAAATCAGCCTTTATTT
CTGAGGTATCAAGAGGGGACTACGTAAACAATGTTGAGAACTGTCTGAAA
TACATAAAAGATGGAGAAAGCTATGAGTTATGTCTTACAACCCAGCTACG
AAAAAGAATTGGGGAAATAGATTCTTTGGGGCTTTACCTTCACCTTAGAG
AAAAAAATCCAGCACCATATGCTGCCTGGCTTAGTTTTTCTAAGGAGGAT
TTATGCATTTGTTGTTCTTCTCCTGAGAGGTTTCTACGATTGGATAAGAA
TGACTTATTAGAAGCAAAACCCATCAAGGGTACCATAGCTCGTGGATCCA
CACCAGAAGAAGATGAACAGCTCAAATTGCAACTGCAGTATAGTGAAAAG
GATCAGGCTGAAAATTTGATGATAGTGGATCTTCTAAGGAATGACCTTGG
TCGTGTCTGTGAGCCGGGATCTGTACATGTCCCAAATCTCATGAATGTGG
AATCATATGCAACAGTTCACACCATGGTGAGTACAATCTGTGGGAAAAAG
CATTCAAATGTTAGTGCAGTTTATTGTGTCAGAGCAGCATTCCCAGGTGG
TTCAATGACTGGTGCACCAAGTTGAGGTCGATGGGAATTCTGAGTCTATT
GAGAGTGTTCTCGGGGTACTACTCTGGCTCATTGGGTATTCTCATA
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