FC923149

Overview
NameFC923149
Unique NameFC923149
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length746
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923149 vs. ExPASy Swiss-Prot
Match: TRPE_SCHPO (Probable anthranilate synthase component 1 OS=Schizosaccharomyces pombe GN=trp3 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.650e-23
Identity = 63/190 (33.16%), Postives = 105/190 (55.26%), Query Frame = 1
Query:  100 SEVSRGDYVNNVENCLKYIKDGESYELCLTTQLRKRIGEIDSLGLYLHLREKNPAPYAAWLSFSKEDLCICCSSPERFLRLDKNDLLEAKPIKGTIARGSTPEEDEQLKLQLQYSEKDQAENLMIVDLLRNDLGRVCEPGSVHVPNLMNVESYATVHTMVSTICGKKHSNVSAVYCVRAAFPGGSMTGAP 669
            S V    Y   V N  ++I +G+ ++   + ++ +R  ++    LY HLR  NP+PY  ++    +D  I  +SPE  ++ +   ++   PI GT+ RG T EEDE     L  S KD+AE++M+VDL RND+ RVC+  +  V  LM +E ++ V  +VS + G    + +     R+ FP G+++G+P
Sbjct:  208 SNVGEDGYKAFVSNLKEHIFNGDIFQAVPSQRIARRT-DLHPFNLYRHLRTVNPSPYMFYIHC--DDFDIIGASPELLVKSEHGRIIN-HPIAGTVPRGKTKEEDEAYAKDLLASVKDRAEHVMLVDLARNDVSRVCDLDTTSVDKLMTIEKFSHVQHLVSQVSGVLRPDKTRFDAFRSIFPAGTVSGSP 393          
BLAST of FC923149 vs. ExPASy Swiss-Prot
Match: TRPE_BUCAI (Anthranilate synthase component 1 OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=trpE PE=3 SV=3)

HSP 1 Score: 109.383 bits (272), Expect = 2.155e-23
Identity = 74/223 (33.18%), Postives = 123/223 (55.16%), Query Frame = 1
Query:   37 RQLEEQNLHAPTVSRNKSA----FISEVSRGDYVNNVENCLKYIKDGESYELCLTTQLRKRIGEID-SLGLYLHLREKNPAPYAAWLSFSKEDLCICCSSPERFLRLD-KNDLLEAKPIKGTIARGSTPEE------DEQLKLQLQYSEKDQAENLMIVDLLRNDLGRVCEPGSVHVPNLMNVESYATVHTMVSTICGKKHSNVSAVYCVRAAFPGGSMTGAP 669
            ++LEE+    P   +NK+       S +S   Y + ++   K I+ GE +++  +   RK     D SL  Y  L++ NP+PY  ++    ED  +  +SPE  L+ D KN  +E  PI GT  RG   +       D +++L+++ + K+ AE+LM+VDL RNDL R+CEPGS +V +L+ V+ Y+ V  +VS + G+    + A++   +    G++TGAP
Sbjct:  217 KKLEEKLTSIP---KNKTTVPVQLTSNISDFQYSSTIKKLQKLIQKGEIFQVVPS---RKFFLPCDNSLSAYQELKKSNPSPYMFFMQ--DEDFILFGASPESSLKYDEKNRQIELYPIAGTRPRGRKKDGTLDLDLDSRIELEMRTNHKELAEHLMLVDLARNDLARICEPGSRYVSDLVKVDKYSHVMHLVSKVVGQLKYGLDALHAYSSCMNMGTLTGAP 431          
BLAST of FC923149 vs. ExPASy Swiss-Prot
Match: TRPE_ARATH (Anthranilate synthase component I-1, chloroplastic OS=Arabidopsis thaliana GN=ASA1 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.815e-23
Identity = 69/210 (32.86%), Postives = 116/210 (55.24%), Query Frame = 1
Query:   40 QLEEQNLHAPTVSRNKSAFISEVSRGDYVNNVENCLKYIKDGESYELCLTTQLRKRIGEIDSLGLYLHLREKNPAPYAAWLSFSKEDLCICCSSPERFLRLDKNDLLEAKPIKGTIARGSTPEEDEQLKLQLQYSEKDQAENLMIVDLLRNDLGRVCEPGSVHVPNLMNVESYATVHTMVSTICGKKHSNVSAVYCVRAAFPGGSMTGAP 669
            +L   N++  T     S   S V+  +Y   V    ++I  G+ +++ L+ +  +R    D   +Y  LR  NP+PY  +L        +  SSPE   ++ +N ++  +P+ GT  RG    ED++L+ +L  +EK  AE++M+VDL RND+G+V + GSV V  LMN+E Y+ V  + ST+ G+    ++    +RAA P G+++GAP
Sbjct:  282 KLAAGNVNLQTRQFGPSLDNSNVTCEEYKEAVVKAKEHILAGDIFQIVLSQRFERRTFA-DPFEVYRALRVVNPSPYMGYLQ--ARGCILVASSPEILTKVKQNKIVN-RPLAGTSKRGKNEVEDKRLEKELLENEKQCAEHIMLVDLGRNDVGKVTKYGSVKVEKLMNIERYSHVMHISSTVTGELQDGLTCWDVLRAALPVGTVSGAP 487          
BLAST of FC923149 vs. ExPASy Swiss-Prot
Match: TRPE_ARTGO (Anthranilate synthase component 1 OS=Arthrobacter globiformis GN=trpE PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.070e-22
Identity = 66/189 (34.92%), Postives = 104/189 (55.03%), Query Frame = 1
Query:  118 DYVNNVENCLKYIKDGESYELCLTTQLRKRIGEIDSLGLYLHLREKNPAPYAAWLSFSKEDLC-----ICCSSPERFLRLDKNDLLEAKPIKGTIARGSTPEEDEQLKLQLQYSEKDQAENLMIVDLLRNDLGRVCEPGSVHVPNLMNVESYATVHTMVSTICGKKHSNVSAVYCVRAAFPGGSMTGAP 669
            +Y+  ++   + I DGE +++ ++ +     G    L +Y  LR  NP+PY     FS ED       I  SSPE  + +   D++   PI G+  RG T + D+ L  +L   +K++AE+LM+VDL RNDL +VC  GSV V   M VE ++ +  +VST+ G+      A   ++A FP G+++GAP
Sbjct:  236 EYLAALDRGKEAIVDGEVFQVVISRRFEMECGA-SPLDVYRVLRNTNPSPYM--YIFSLEDAAGRQYSIVGSSPEALVTVTGEDVI-THPIAGSRPRGKTVDADKALAEELLADQKERAEHLMLVDLSRNDLSKVCVAGSVDVTQFMEVERFSHIMHLVSTVVGRLAPTAKAYDVLKATFPAGTLSGAP 420          
BLAST of FC923149 vs. ExPASy Swiss-Prot
Match: TRPE_LACLA (Anthranilate synthase component 1 OS=Lactococcus lactis subsp. lactis GN=trpE PE=3 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 1.825e-22
Identity = 63/196 (32.14%), Postives = 108/196 (55.10%), Query Frame = 1
Query:   82 NKSAFISEVSRGDYVNNVENCLKYIKDGESYELCLTTQLRKRIGEIDSLGLYLHLREKNPAPYAAWLSFSKEDLCICCSSPERFLRLDKNDLLEAKPIKGTIARGSTPEEDEQLKLQLQYSEKDQAENLMIVDLLRNDLGRVCEPGSVHVPNLMNVESYATVHTMVSTICGKKHSNVSAVYCVRAAFPGGSMTGAP 669
            +K  F+S +S+  +   V    + I++G+ +++ L+ +L     + +    Y  LR +NP+ Y  ++ F  ++  +  SSPER + +  N +    PI GT  RG T  ED+ L   L+   K+ AE+ M+VDL RND+G++ + GS+ VP  M VE Y  V  + S + G+     +A+  +RA  P G+++GAP
Sbjct:  184 SKLNFVSNMSQELFEEKVAKAKELIRNGDMFQVVLSQRLTADFTD-NPFNYYRKLRVENPSSYMYFMEF--DNFHVIGSSPERLVAVHGNQV-STNPIAGTRKRGQTEFEDQALIEDLESDPKEVAEHKMLVDLGRNDIGKISKYGSIEVPVFMKVEKYRYVMHITSEVTGELRPEFTAMDALRATLPAGTLSGAP 375          
BLAST of FC923149 vs. ExPASy Swiss-Prot
Match: TRPE_PSEAE (Anthranilate synthase component 1 OS=Pseudomonas aeruginosa GN=trpE PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.383e-22
Identity = 68/193 (35.23%), Postives = 106/193 (54.92%), Query Frame = 1
Query:   91 AFISEVSRGDYVNNVENCLKYIKDGESYELCLTTQLRKRIGEIDSLGLYLHLREKNPAPYAAWLSFSKEDLCICCSSPERFLRLDKNDLLEAKPIKGTIARGSTPEEDEQLKLQLQYSEKDQAENLMIVDLLRNDLGRVCEPGSVHVPNLMNVESYATVHTMVSTICGKKHSNVSAVYCVRAAFPGGSMTGAP 669
            AF +  +R DY N V     YI  G+  ++  + ++     +   + LY  LR  NP PY  + +F   D  +  SSPE  +R++ + L+  +PI GT  RG   E D  L+  L    K+ AE+LM++DL RND+GRV + G+V V   M +E Y+ V  +VS + G+    +SA+  +RA  P G+++GAP
Sbjct:  216 AFRASFTREDYENAVGRIKDYILAGDCMQVVPSQRMSIEF-KAAPIDLYRALRCFNPTPYMYFFNFG--DFHVVGSSPEVLVRVE-DGLVTVRPIAGTRPRGINEEADLALEQDLLSDAKEIAEHLMLIDLGRNDVGRVSDIGAVKVTEKMVIERYSNVMHIVSNVTGQLREGLSAMDALRAILPAGTLSGAP 404          
BLAST of FC923149 vs. ExPASy Swiss-Prot
Match: TRPE_ARCFU (Anthranilate synthase component 1 OS=Archaeoglobus fulgidus GN=trpE PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.309e-22
Identity = 68/197 (34.52%), Postives = 107/197 (54.31%), Query Frame = 1
Query:   79 RNKSAFISEVSRGDYVNNVENCLKYIKDGESYELCLTTQLRKRIGEIDSLGLYLHLREKNPAPYAAWLSFSKEDLCICCSSPERFLRLDKNDLLEAKPIKGTIARGSTPEEDEQLKLQLQYSEKDQAENLMIVDLLRNDLGRVCEPGSVHVPNLMNVESYATVHTMVSTICGKKHSNVSAVYCVRAAFPGGSMTGAP 669
            R  S  +   SR  +   VE   + I +GE Y++ L+ +      ++    +YL+LRE NP+PY   L F   D  +  SSPE   R++ N  +   PI GT  R +  E++  +  +L   EK++AE++M+VDL RND+ +VC  GSV V   M V  Y +V  + S + G+  + V+    ++A FP G++TGAP
Sbjct:  142 RGNSEVLRAGSREKFEKMVERGKEQIFEGEVYQIVLSREYVVDT-DLSPFQMYLNLRETNPSPYMFLLEF---DRALIGSSPETMGRVEGNSFI-INPIAGTARREAGREKE--IAEKLLSDEKERAEHVMLVDLARNDVRKVCRAGSVRVSRFMEVVEYPSVLHIESEVVGELKAGVTHFDAMKATFPAGTVTGAP 331          
BLAST of FC923149 vs. ExPASy Swiss-Prot
Match: PABB_LACLA (Para-aminobenzoate synthase component 1 OS=Lactococcus lactis subsp. lactis GN=pabB PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.309e-22
Identity = 68/175 (38.86%), Postives = 98/175 (56.00%), Query Frame = 1
Query:  151 YIKDGESYELCLTTQLRKRIGEIDSLGL--YLHLREKNPAPYAAWLSFSKEDLCICCSSPERFLRLDKNDLLEAKPIKGTIARGSTPEEDEQLKLQLQYSEKDQAENLMIVDLLRNDLGRVCEPGSVHVPNLMNVESYATVHTMVSTICGKKHSNVSAVYCVRAAFPGGSMTGAP 669
            Y+  G+ Y++ L     + +G I       Y  LR  NP PY  +L    ++  I  +SPE  L  + NDL   +PI GT+ R +  +ED      L    KD+AE++MIVDL+RNDLGRV   GSV+V  ++  E+Y+ V  +VS + G  +    A+  +RA FPGGS+TGAP
Sbjct:  211 YLGSGDMYQVNLGN---RNVGAIVMTLFQGYNQLRLMNPGPYMVFL----DEANIIMASPEIVLADEANDL-NTRPIAGTLMRLNEQDEDGVNAACLGQHHKDRAEHMMIVDLVRNDLGRVGRFGSVNVQEIVGAENYSVVMHIVSRVTGSLNEAFEAMEIIRAGFPGGSITGAP 377          
BLAST of FC923149 vs. ExPASy Swiss-Prot
Match: TRPE_BUCRM (Anthranilate synthase component 1 OS=Buchnera aphidicola subsp. Rhopalosiphum maidis GN=trpE PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.183e-21
Identity = 65/218 (29.82%), Postives = 118/218 (54.13%), Query Frame = 1
Query:   37 RQLEEQNLHAPTVSRNKSAFISEVSRGDYVNNVENCLKYIKDGESYELCLTTQLRKRIGEIDSLGLYLHLREKNPAPYAAWLSFSKEDLCICCSSPERFLRLD-KNDLLEAKPIKGTIARGSTPEE------DEQLKLQLQYSEKDQAENLMIVDLLRNDLGRVCEPGSVHVPNLMNVESYATVHTMVSTICGKKHSNVSAVYCVRAAFPGGSMTGAP 669
            ++L E+    P V        S ++  +Y + ++   K I+ GE +++  + +        + L  Y  L++ NP+PY  ++    +D  +  +SPE  L+ D K   +E  PI GT  RG T +       D +++L+++ + K+ AE+LM+VDL RNDL R+C+PGS +V +L+ V+ Y+ V  +VS + G+    + A++   +    G++TGAP
Sbjct:  217 KKLNEKLKSIPKVKITDINLTSNMNNFEYGSIIKKLQKLIQKGEIFQVVPSRKFYLPCP--NPLSAYQKLKKSNPSPYMFFMQ--DKDFTLFGASPESSLKYDEKTRKIELYPIAGTRPRGRTEDGNLDLDLDSRIELEMRTNHKELAEHLMLVDLARNDLARICKPGSRYVSDLVKVDKYSHVMHLVSKVIGELKEGLDALHAYASCMNMGTLTGAP 430          
BLAST of FC923149 vs. ExPASy Swiss-Prot
Match: TRPE_NEIMF (Anthranilate synthase component 1 OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=trpE PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.545e-21
Identity = 64/191 (33.51%), Postives = 104/191 (54.45%), Query Frame = 1
Query:   97 ISEVSRGDYVNNVENCLKYIKDGESYELCLTTQLRKRIGEIDSLGLYLHLREKNPAPYAAWLSFSKEDLCICCSSPERFLRLDKNDLLEAKPIKGTIARGSTPEEDEQLKLQLQYSEKDQAENLMIVDLLRNDLGRVCEPGSVHVPNLMNVESYATVHTMVSTICGKKHSNVSAVYCVRAAFPGGSMTGAP 669
            +SE     +   V     YI  G+  ++  + ++     +  SL LY  LR  NP+PY  +  F   D  I  SSPE  +R +++D++  +PI GT  RG TP ED   +  L    K+ AE++M++DL RND+GR+ + G V V + M +E Y+ V  +VS + G+    ++ +  + A FP G+++GAP
Sbjct:  216 VSEFGEEPFKACVNKIKDYIFAGDCMQVVPSQRMSMEFTD-SSLALYRALRTLNPSPYLFYYDFG--DFHIVGSSPEILVRRERDDVI-VRPIAGTRLRGKTPAEDLANEQDLLSDAKEIAEHVMLIDLGRNDVGRISKTGEVKVTDKMVIEKYSHVMHIVSNVEGRLKDGMTNMDILAATFPAGTLSGAP 402          
The following BLAST results are available for this feature:
BLAST of FC923149 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 75
Match NameE-valueIdentityDescription
TRPE_SCHPO1.650e-2333.16Probable anthranilate synthase component 1 OS=Schi... [more]
TRPE_BUCAI2.155e-2333.18Anthranilate synthase component 1 OS=Buchnera aphi... [more]
TRPE_ARATH2.815e-2332.86Anthranilate synthase component I-1, chloroplastic... [more]
TRPE_ARTGO1.070e-2234.92Anthranilate synthase component 1 OS=Arthrobacter ... [more]
TRPE_LACLA1.825e-2232.14Anthranilate synthase component 1 OS=Lactococcus l... [more]
TRPE_PSEAE2.383e-2235.23Anthranilate synthase component 1 OS=Pseudomonas a... [more]
TRPE_ARCFU5.309e-2234.52Anthranilate synthase component 1 OS=Archaeoglobus... [more]
PABB_LACLA5.309e-2238.86Para-aminobenzoate synthase component 1 OS=Lactoco... [more]
TRPE_BUCRM1.183e-2129.82Anthranilate synthase component 1 OS=Buchnera aphi... [more]
TRPE_NEIMF1.545e-2133.51Anthranilate synthase component 1 OS=Neisseria men... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31701F04EF StrClemenN Citrus clementina cDNA clone C31701F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923149 ID=FC923149; Name=FC923149; organism=Citrus clementina; type=EST; length=746bp
AGAACAGAAGCTTATTGGCTTAAGAGCTTCTTCACAAGGCAGTTGGAGGA
GCAGAATTTACATGCTCCAACAGTTTCTCGAAATAAATCAGCCTTTATTT
CTGAGGTATCAAGAGGGGACTACGTAAACAATGTTGAGAACTGTCTGAAA
TACATAAAAGATGGAGAAAGCTATGAGTTATGTCTTACAACCCAGCTACG
AAAAAGAATTGGGGAAATAGATTCTTTGGGGCTTTACCTTCACCTTAGAG
AAAAAAATCCAGCACCATATGCTGCCTGGCTTAGTTTTTCTAAGGAGGAT
TTATGCATTTGTTGTTCTTCTCCTGAGAGGTTTCTACGATTGGATAAGAA
TGACTTATTAGAAGCAAAACCCATCAAGGGTACCATAGCTCGTGGATCCA
CACCAGAAGAAGATGAACAGCTCAAATTGCAACTGCAGTATAGTGAAAAG
GATCAGGCTGAAAATTTGATGATAGTGGATCTTCTAAGGAATGACCTTGG
TCGTGTCTGTGAGCCGGGATCTGTACATGTCCCAAATCTCATGAATGTGG
AATCATATGCAACAGTTCACACCATGGTGAGTACAATCTGTGGGAAAAAG
CATTCAAATGTTAGTGCAGTTTATTGTGTCAGAGCAGCATTCCCAGGTGG
TTCAATGACTGGTGCACCAAGTTGAGGTCGATGGGAATTCTGAGTCTATT
GAGAGTGTTCTCGGGGTACTACTCTGGCTCATTGGGTATTCTCATA
back to top