FC923160

Overview
NameFC923160
Unique NameFC923160
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length732
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923160 vs. ExPASy Swiss-Prot
Match: TLPH_ORYSJ (Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os11g0706600 PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.895e-38
Identity = 78/175 (44.57%), Postives = 98/175 (56.00%), Query Frame = 2
Query:  194 MINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAPASWGGCMWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKL-DGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGGVACKSACEAFRQPQYCCNGAFSTP 715
            M+N C  +VWPG+L  A  P   + GF L  GE   L  PA W G +W R  CS DS G+ +C TGDCGG L C+G+  A PAT+ E  L        FYDVSLVDG+N PV +   GG G  C +  C  D+N  CPS L+V  D       C+SAC A    +YCC G +++P
Sbjct:   33 MVNNCGESVWPGLLGTAGHPTPQSGGFHLGAGEEAALEVPAGWSGRVWPRRGCSFDSRGRGSCATGDCGGVLRCNGAAGATPATVVEMTLGTSASAMHFYDVSLVDGFNAPVSMAAVGG-GVGCGTAACGADVNVCCPSALEV-RDREGRVAGCRSACRAMGGDRYCCTGDYASP 205          
BLAST of FC923160 vs. ExPASy Swiss-Prot
Match: PRR3_JUNAS (Pathogenesis-related protein OS=Juniperus ashei PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.404e-33
Identity = 78/174 (44.83%), Postives = 102/174 (58.62%), Query Frame = 2
Query:  188 FTMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAPASWGGC-MWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGGVACKSACEAFRQPQYCCNGAF 706
            F + N+C +TVW        +  L   G  L++G+T T+N  A       W RT C+ D++GK +C TGDCGG+L C+ SGA  PATLAE+       QD+YDVSLVDG+N+P+ + P       CT+  C  D+NA CPSELKV  DGG     C SAC  F+  QYCC  A+
Sbjct:   29 FDIKNQCGYTVW--------AAGLPGGGKRLDQGQTWTVNLAAGTASARFWGRTGCTFDASGKGSCQTGDCGGQLSCTVSGAV-PATLAEYT---QSDQDYYDVSLVDGFNIPLAINPTNA---QCTAPACKADINAVCPSELKV--DGG-----CNSACNVFKTDQYCCRNAY 180          
BLAST of FC923160 vs. ExPASy Swiss-Prot
Match: ZEAM_MAIZE (Zeamatin OS=Zea mays GN=Zlp PE=1 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 5.447e-32
Identity = 72/185 (38.92%), Postives = 108/185 (58.38%), Query Frame = 2
Query:  179 STTFTMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAPASWGGC-MWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGGVACKSACEAFRQPQYCCNGAFSTPIHASH 730
            +  FT++N+C  TVW   +           G  L +GE+  + APA      +WART C  D++G+ +C TGDCGG L+C+G G A P TLAE+ L  +   DF+D+SL+DG+N+P+  +P GG G +     C VD+NA CP+EL+   DG      C +AC  F++ +YCC G+ +   H ++
Sbjct:   21 AAVFTVVNQCPFTVWAASVPVGG-------GRQLNRGESWRITAPAGTTAARIWARTGCKFDASGRGSCRTGDCGGVLQCTGYGRA-PNTLAEYALKQFNNLDFFDISLIDGFNVPMSFLPDGGSGCS-RGPRCAVDVNARCPAELR--QDG-----VCNNACPVFKKDEYCCVGSAANDCHPTN 189          
BLAST of FC923160 vs. ExPASy Swiss-Prot
Match: IAAT_MAIZE (Alpha-amylase/trypsin inhibitor OS=Zea mays PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.027e-30
Identity = 70/182 (38.46%), Postives = 106/182 (58.24%), Query Frame = 2
Query:  188 FTMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAPASWGGC-MWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGGVACKSACEAFRQPQYCCNGAFSTPIHASH 730
            FT++N+C  TVW   +           G  L +GE+  + APA      +WART C  D++G+ +C TGDCGG ++C+G G A P TLAE+ L  +   DF+D+S++DG+N+P   +P GG G +     C VD+NA CP+EL+   DG      C +AC  F++ +YCC G+ +   H ++
Sbjct:    3 FTVVNQCPFTVWAASVPVGG-------GRQLNRGESWRITAPAGTTAARIWARTGCQFDASGRGSCRTGDCGGVVQCTGYGRA-PNTLAEYALKQFNNLDFFDISILDGFNVPYSFLPDGGSGCS-RGPRCAVDVNARCPAELR--QDG-----VCNNACPVFKKDEYCCVGSAANNCHPTN 168          
BLAST of FC923160 vs. ExPASy Swiss-Prot
Match: P21_SOYBN (Protein P21 OS=Glycine max PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 6.659e-30
Identity = 72/178 (40.45%), Postives = 97/178 (54.49%), Query Frame = 2
Query:  188 FTMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAPASWGGC-MWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCT-STGCVVDLNAACPSELKVMTDGGSGGVACKSACEAFRQPQYCCNGAFSTP 715
            F + N+C +TVW   +           G  L  G++ +++ PA   G  +WART C+ D +G+  C TGDCGG L+C   G APP TLAE+ L+G+   DF+D+SLVDG+N+P+   P       CT    C  D+N  CPSELK  T GG     C + C  F+  QYCCN     P
Sbjct:    3 FEITNRCTYTVWAASVPVGG-------GVQLNPGQSWSVDVPAGTKGARVWARTGCNFDGSGRGGCQTGDCGGVLDCKAYG-APPNTLAEYGLNGFNNLDFFDISLVDGFNVPMDFSPTSN---GCTRGISCTADINGQCPSELK--TQGG-----CNNPCTVFKTDQYCCNSGSCGP 162          
BLAST of FC923160 vs. ExPASy Swiss-Prot
Match: OSMO_TOBAC (Osmotin OS=Nicotiana tabacum GN=AP24 PE=1 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 6.659e-30
Identity = 70/173 (40.46%), Postives = 97/173 (56.07%), Query Frame = 2
Query:  179 STTFTMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAPASWGGC-MWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGGVACKSACEAFRQPQYCC 694
            + T  + N C +TVW      A +P     G  L++G+T  +NAP       +W RT C+ ++ G+ TC TGDCGG L+C+G G  PP TLAE+ LD + G DF+D+SLVDG+N+P+   P    G  C +  C  ++N  CP EL+V   GG     C + C  F   QYCC
Sbjct:   21 AATIEVRNNCPYTVWA-----ASTPIGG--GRRLDRGQTWVINAPRGTKMARVWGRTNCNFNAAGRGTCQTGDCGGVLQCTGWGK-PPNTLAEYALDQFSGLDFWDISLVDGFNIPMTFAPTNPSGGKCHAIHCTANINGECPRELRV--PGG-----CNNPCTTFGGQQYCC 178          
BLAST of FC923160 vs. ExPASy Swiss-Prot
Match: TPM1_SOLLC (Osmotin-like protein TPM-1 (Fragment) OS=Solanum lycopersicum GN=TPM-1 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.530e-29
Identity = 69/173 (39.88%), Postives = 95/173 (54.91%), Query Frame = 2
Query:  179 STTFTMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAPASWGGC-MWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGGVACKSACEAFRQPQYCC 694
            + TF + N C +TVW      A +P     G  L++G+T  +NAP       +W RT C+ D  G+ +C TGDCGG L+C+G G  PP TLAE+ LD +   DF+D+SLVDG+N+P+   P    G  C +  C  ++N  CP  L+V   GG     C + C  F   QYCC
Sbjct:   13 AATFEVRNNCPYTVWA-----ASTPIGG--GRRLDRGQTWVINAPRGTKMARIWGRTNCNFDGDGRGSCQTGDCGGVLQCTGWGK-PPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTNPSGGKCHAIHCTANINGECPGSLRV--PGG-----CNNPCTTFGGQQYCC 170          
BLAST of FC923160 vs. ExPASy Swiss-Prot
Match: NP24_SOLLC (Protein NP24 OS=Solanum lycopersicum PE=1 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 5.637e-29
Identity = 73/179 (40.78%), Postives = 97/179 (54.19%), Query Frame = 2
Query:  170 CVTST---TFTMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAPASWGGC-MWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGGVACKSACEAFRQPQYCC 694
            CVT T   T  + N C +TVW      A +P     G  L +G+T  +NAP       +W RT C+ ++ G+ TC TGDCGG L+C+G G  PP TLAE+ LD +   DF+D+SLVDG+N+P+   P    G  C +  C  ++N  CP  LKV   GG     C + C  F   QYCC
Sbjct:   15 CVTYTYAATIEVRNNCPYTVWA-----ASTPIGG--GRRLNRGQTWVINAPRGTKMARIWGRTGCNFNAAGRGTCQTGDCGGVLQCTGWGK-PPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTKPSGGKCHAIHCTANINGECPRALKV--PGG-----CNNPCTTFGGQQYCC 178          
BLAST of FC923160 vs. ExPASy Swiss-Prot
Match: OS13_SOLCO (Osmotin-like protein OSML13 OS=Solanum commersonii PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.616e-29
Identity = 68/173 (39.31%), Postives = 94/173 (54.34%), Query Frame = 2
Query:  179 STTFTMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAPASWGGC-MWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGGVACKSACEAFRQPQYCC 694
            + T  + N C +TVW      A +P     G  L++G+T  +NAP       +W RT C+ D  G+ +C TGDCGG L+C+G G  PP TLAE+ LD +   DF+D+SLVDG+N+P+   P    G  C +  C  ++N  CP  L+V   GG     C + C  F   QYCC
Sbjct:   21 AATIEVRNNCPYTVWA-----ASTPIGG--GRRLDRGQTWVINAPRGTKMARIWGRTNCNFDGAGRGSCQTGDCGGVLQCTGWGK-PPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTNPSGGKCHAIHCTANINGECPGSLRV--PGG-----CNNPCTTFGGQQYCC 178          
BLAST of FC923160 vs. ExPASy Swiss-Prot
Match: TLP_ACTDE (Thaumatin-like protein OS=Actinidia deliciosa GN=tlp PE=1 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 8.140e-28
Identity = 69/180 (38.33%), Postives = 94/180 (52.22%), Query Frame = 2
Query:  164 FSCVTSTTFTMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAPASWGGC-MWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCT-STGCVVDLNAACPSELKVMTDGGSGGVACKSACEAFRQPQYCCN 697
            F+C    TF +IN C  TVW        + A+   G  L++G+   +N  A   G  +W RT C+ D  G+  C TGDC G L+C   G  PP TLAE+ L+ +   DF+D+SLVDG+N+ +   P  G    CT    C  D+N  CP+EL+    GG     C + C  F+  QYCCN
Sbjct:   19 FTCARGATFNIINNCPFTVW--------AAAVPGGGKRLDRGQNWIINPGAGTKGARVWPRTGCNFDGAGRGKCQTGDCNGLLQCQAFGQ-PPNTLAEYALNQFNNLDFFDISLVDGFNVAMEFSPTSG---GCTRGIKCTADINGQCPNELR--APGG-----CNNPCTVFKTDQYCCN 179          
The following BLAST results are available for this feature:
BLAST of FC923160 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
TLPH_ORYSJ3.895e-3844.57Thaumatin-like protein OS=Oryza sativa subsp. japo... [more]
PRR3_JUNAS8.404e-3344.83Pathogenesis-related protein OS=Juniperus ashei PE... [more]
ZEAM_MAIZE5.447e-3238.92Zeamatin OS=Zea mays GN=Zlp PE=1 SV=2[more]
IAAT_MAIZE1.027e-3038.46Alpha-amylase/trypsin inhibitor OS=Zea mays PE=1 S... [more]
P21_SOYBN6.659e-3040.45Protein P21 OS=Glycine max PE=1 SV=1[more]
OSMO_TOBAC6.659e-3040.46Osmotin OS=Nicotiana tabacum GN=AP24 PE=1 SV=2[more]
TPM1_SOLLC2.530e-2939.88Osmotin-like protein TPM-1 (Fragment) OS=Solanum l... [more]
NP24_SOLLC5.637e-2940.78Protein NP24 OS=Solanum lycopersicum PE=1 SV=2[more]
OS13_SOLCO9.616e-2939.31Osmotin-like protein OSML13 OS=Solanum commersonii... [more]
TLP_ACTDE8.140e-2838.33Thaumatin-like protein OS=Actinidia deliciosa GN=t... [more]

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Properties
Property NameValue
Genbank descriptionC31701G03EF StrClemenN Citrus clementina cDNA clone C31701G03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923160 ID=FC923160; Name=FC923160; organism=Citrus clementina; type=EST; length=732bp
GACTCTGCTTCCTACCTTCTCCCTCTTCTTCATTGACCTTTTTCTCTTTT
CTTTTTTTTCTTTTTTTTTTTTTATATTTTTAACATTCAGCAGCCACCAG
CCGCCAGCTCCTCCGATGGCCGCCTCTCAACTAACACTTTTACTTTTAAT
CACTCATTTAACATTTTCCTGTGTGACATCCACCACCTTCACAATGATCA
ACAAATGCGACCACACAGTATGGCCCGGCATTCTCTCTAACGCCGACTCT
CCCGCACTCTCCACCACCGGCTTCCCCCTTGAAAAGGGAGAGACCAAGAC
CCTCAACGCACCCGCTTCGTGGGGCGGCTGCATGTGGGCCAGAACACTCT
GCTCCCAGGACTCCACCGGTAAGTTCACCTGCGTCACAGGTGATTGCGGC
GGCAAGCTGGAATGCTCCGGCAGTGGTGCTGCCCCACCCGCCACTCTTGC
TGAGTTCAAGCTCGATGGCTATGGTGGCCAAGACTTCTATGATGTCAGTT
TGGTCGACGGCTACAACCTCCCCGTGCTTGTCGTTCCTCAGGGTGGTGAC
GGACCCAATTGTACAAGCACGGGATGCGTTGTCGACTTGAACGCCGCGTG
TCCTTCGGAGCTTAAGGTTATGACCGACGGTGGCAGCGGAGGTGTTGCTT
GCAAGAGCGCGTGCGAAGCCTTTAGGCAGCCGCAGTACTGTTGTAATGGC
GCGTTTAGTACTCCGATACATGCAAGCCATCT
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