FC923160
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923160 vs. ExPASy Swiss-Prot
Match: TLP_WHEAT (Thaumatin-like protein PWIR2 OS=Triticum aestivum PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.913e-22 Identity = 57/135 (42.22%), Postives = 77/135 (57.04%), Query Frame = 2 Query: 176 TSTTFTMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAPA-SWGGCMWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGC 577 ++ TF + N C T+WP + GF L G+T ++N PA + G +WART CS + G +C TGDCGG+L CS SG PPATLAE+ + G QDFYD+S++DG+NL + GD C C Sbjct: 19 SAATFNIKNNCGFTIWPAGIPVGG-------GFALGSGQTSSINVPAGTQAGRIWARTGCSFNG-GSGSCQTGDCGGQLSCSLSGR-PPATLAEYTIGGGSTQDFYDISVIDGFNLAMDFSCSTGDALQCRDPSC 144
BLAST of FC923160 vs. ExPASy Swiss-Prot
Match: TLP_ORYSJ (Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os12g0628600 PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.638e-21 Identity = 57/134 (42.54%), Postives = 75/134 (55.97%), Query Frame = 2 Query: 179 STTFTMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAPASWG-GCMWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGC 577 + TFT+ N+C TVWP A +P G L G+T T+N PA G +W RT CS D +G+ +C TGDC G L C+ SG P TLAEF + G QDFYD+S++DGYN+ + G C + C Sbjct: 26 AATFTITNRCSFTVWP-----AATPVGG--GVQLSPGQTWTINVPAGTSSGRVWGRTGCSFDGSGRGSCATGDCAGALSCTLSG-QKPLTLAEFTIG--GSQDFYDLSVIDGYNVAMSFSCSSGVTVTCRDSRC 149
BLAST of FC923160 vs. ExPASy Swiss-Prot
Match: RST4_AVESA (Thaumatin-like pathogenesis-related protein 4 OS=Avena sativa GN=RASTL-4 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.907e-19 Identity = 55/135 (40.74%), Postives = 74/135 (54.81%), Query Frame = 2 Query: 176 TSTTFTMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAPASWG-GCMWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGC 577 ++ TFT+ N C +TVWP + G L++G+T TLN PA G +W RT CS + G +C TGDC G L C+ SG PATLAEF + G D+YD+S++D YNL + GD C + C Sbjct: 20 SAATFTITNNCGYTVWPAAIPVGG-------GQQLDQGQTWTLNVPAGTNSGRIWGRTGCSFNG-GSGSCQTGDCAGALSCTLSGQ--PATLAEFSIGGE--HDYYDISVIDVYNLAMDFSCSTGDALQCRDSSC 142
BLAST of FC923160 vs. ExPASy Swiss-Prot
Match: RST3_AVESA (Thaumatin-like pathogenesis-related protein 3 OS=Avena sativa GN=RASTL-3 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.625e-18 Identity = 53/135 (39.26%), Postives = 73/135 (54.07%), Query Frame = 2 Query: 176 TSTTFTMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAPASWG-GCMWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGC 577 ++ TF + N C TVWP + GF L ++ +N PA G +W RT CS ++ G+ +C TGDC G L C+ SG PATLAE+ + G QDFYD+S++DGYNL + G C +GC Sbjct: 20 SAATFRITNNCGFTVWPAGIPVGG-------GFQLNSKQSSNINVPAGTSAGRIWGRTGCSFNN-GRGSCATGDCAGALSCTLSGQ--PATLAEYTIGG--SQDFYDISVIDGYNLAMDFSCSTGVALKCRDSGC 142
BLAST of FC923160 vs. ExPASy Swiss-Prot
Match: RST2_AVESA (Thaumatin-like pathogenesis-related protein 2 OS=Avena sativa GN=RASTL-2 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.701e-17 Identity = 52/135 (38.52%), Postives = 71/135 (52.59%), Query Frame = 2 Query: 176 TSTTFTMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAPASWG-GCMWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGC 577 ++ TF + N C TVWP + GF L ++ +N PA G +W RT CS ++ G+ +C TGDC G L C+ SG PATLAE+ + G QDFYD+S++DGYNL + G C C Sbjct: 20 SAATFRITNNCGFTVWPAGIPVGG-------GFQLNSKQSSNINVPAGTSAGRIWGRTGCSFNN-GRGSCATGDCAGALSCTLSGQ--PATLAEYTIGG--SQDFYDISVIDGYNLAMDFSCSTGVALKCRDANC 142
BLAST of FC923160 vs. ExPASy Swiss-Prot
Match: RST1_AVESA (Thaumatin-like pathogenesis-related protein 1 OS=Avena sativa GN=RASTL-1 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.950e-17 Identity = 51/135 (37.78%), Postives = 71/135 (52.59%), Query Frame = 2 Query: 176 TSTTFTMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAPASWG-GCMWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGC 577 ++ TF + N C TVWP + GF L ++ +N PA G +W RT CS ++ G+ +C TGDC G L C+ SG PATLAE+ + G QDFYD+S++DG+NL + G C C Sbjct: 20 SAATFRITNNCGFTVWPAGIPVGG-------GFQLNSKQSSNINVPAGTSAGRIWGRTGCSFNN-GRGSCATGDCAGALSCTLSGQ--PATLAEYTIGG--SQDFYDISVIDGFNLAMDFSCSTGVALKCRDANC 142 The following BLAST results are available for this feature:
BLAST of FC923160 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923160 ID=FC923160; Name=FC923160; organism=Citrus clementina; type=EST; length=732bpback to top |