FC923161

Overview
NameFC923161
Unique NameFC923161
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length741
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14 contig Ccv1_Contig14:164..905. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923161 vs. ExPASy Swiss-Prot
Match: GDL75_ARATH (GDSL esterase/lipase At5g08460 OS=Arabidopsis thaliana GN=At5g08460 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.059e-30
Identity = 76/214 (35.51%), Postives = 116/214 (54.21%), Query Frame = 1
Query:   10 AVIVFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEEGKNRIFERSFFLVVVGSNDINNNYFGSR--IRRLQYDISTYTDLLVGHASTFLKEIYGLGARRIGVFGAPTLGCLPSTRTVAGGIKRDCAK 645
            A+ VFGDS+VD GNNN+L + A+ N+ PYG DF G   TGRFSNGK   D + E LG+ E+  A++D      D+L GVN+AS   G    T R          Q++ F++ + ++   + +E       +S  +V +G+ND  NNY   R  +    YD +++ DLL+ + +T L E+YG G R+  + G   LGC+P        +  +C +
Sbjct:   49 AMFVFGDSLVDNGNNNHLNSLARSNYLPYGIDFAGNQPTGRFSNGKTIVDFIGELLGLPEIP-AFMDTVDGGVDILHGVNYASAAGGILEETGRHLGERFSMGRQVENFEKTLMEISRSMRKESVKEYMAKSLVVVSLGNNDYINNYLKPRLFLSSSIYDPTSFADLLLSNFTTHLLELYGKGFRKFVIAGVGPLGCIPDQLAAQAALPGECVE 261          
BLAST of FC923161 vs. ExPASy Swiss-Prot
Match: GDL64_ARATH (GDSL esterase/lipase At4g16230 OS=Arabidopsis thaliana GN=At4g16230 PE=2 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 3.082e-30
Identity = 81/218 (37.16%), Postives = 110/218 (50.46%), Query Frame = 1
Query:    4 VSAVIVFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEEGKNRIFERSFFLVVVGSNDINNNYFGSRIRRLQYDI---STYTDLLVGHASTFLKEIYGLGARRIGVFGAPTLGCLPSTRTVAGGIKRDCAKE 648
            + A  VFGDS+VD GNNN L T +K N+ P G DF  G+ TGRF+NG+   DI+ + LG  EL+  YL PT     +L GVN+ASGG G    T +          QL  F      + + +GE    ++F  + F V  GSND+ NNYF   I  LQ  +     + D ++      L  +Y LGAR+I V     +GC+P  R        +C  E
Sbjct:   28 IPANFVFGDSLVDAGNNNYLATLSKANYVPNGIDF--GSPTGRFTNGRTIVDIVYQALGSDELTPPYLAPTTSGSLILNGVNYASGGSGILNSTGKLFGERINVDAQLDNFATTRQDIISWIGESEAAKLFRSAIFSVTTGSNDLINNYFTPVISTLQRKVVAPEVFVDTMISKFRLQLTRLYQLGARKIVVINIGPIGCIPFERESDPAAGNNCLAE 243          
BLAST of FC923161 vs. ExPASy Swiss-Prot
Match: GDL58_ARATH (GDSL esterase/lipase At3g50400 OS=Arabidopsis thaliana GN=At3g50400 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 3.082e-30
Identity = 78/210 (37.14%), Postives = 116/210 (55.24%), Query Frame = 1
Query:    4 VSAVIVFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEG--GAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEE-GKNRIFERSFFLVVVGSNDINNNY---FGSRIRRLQYDISTYTDLLVGHASTFLKEIYGLGARRIGVFGAPTLGCLPSTRTV 615
            ++A  VFGDS+VD GNNN L+T ++ N PP G DF+   G  TGRF+NG+  +DI+ E+LG +  ++ YL P    E LL GVN+ASGG G    T            Q+  F     +   ++G++  ++ I +RS F VV+GSND  NNY   F +   RL     T+ D ++ H    LK +Y + AR+  V     +GC+P  +++
Sbjct:   32 LAASFVFGDSLVDAGNNNYLQTLSRANSPPNGIDFKPSRGNPTGRFTNGRTIADIVGEKLGQQSYAVPYLAPNASGEALLNGVNYASGGGGILNATGSVFVNRLGMDIQVDYFTNTRKQFDKLLGQDKARDYIRKRSLFSVVIGSNDFLNNYLVPFVAAQARLTQTPETFVDDMISHLRNQLKRLYDMDARKFVVGNVAPIGCIPYQKSI 241          
BLAST of FC923161 vs. ExPASy Swiss-Prot
Match: LTL1_ARATH (GDSL esterase/lipase LTL1 OS=Arabidopsis thaliana GN=LTL1 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.025e-30
Identity = 77/202 (38.12%), Postives = 111/202 (54.95%), Query Frame = 1
Query:   10 AVIVFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEEGKNRIFERSFFLVVVGSNDINNNY----FGSRIRRLQYDISTYTDLLVGHASTFLKEIYGLGARRIGVFGAPTLGCLPS 603
            A  VFGDS+VD GNN+ L T A+ +  PYG D+     TGRFSNG    DI++E +G+   +L YL P L  E+LL G NFAS G G    T            Q++ F++Y  ++ A++G E   ++  ++  L+ +G ND  NNY    F +R R  QY +  Y   L+      L+++Y LGARR+ V G   +GC P+
Sbjct:   29 AFFVFGDSLVDNGNNDYLVTTARADNYPYGIDYPTRRPTGRFSNGLNIPDIISEAIGMPS-TLPYLSPHLTGENLLVGANFASAGIGILNDTGIQFVNIIRISKQMEYFEQYQLRVSALIGPEATQQLVNQALVLITLGGNDFVNNYYLIPFSARSR--QYALPDYVVYLISEYGKILRKLYELGARRVLVTGTGAMGCAPA 227          
BLAST of FC923161 vs. ExPASy Swiss-Prot
Match: GDL80_ARATH (GDSL esterase/lipase At5g37690 OS=Arabidopsis thaliana GN=At5g37690 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.591e-29
Identity = 80/243 (32.92%), Postives = 123/243 (50.62%), Query Frame = 1
Query:   19 VFGDSIVDTGNNNNLK-TPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEEGKNRIFERSFFLVVVGSNDINNNYFGSRIR-RLQYDISTYTDLLVGHASTFLKEIYGLGARRIGVFGAPTLGCLPSTRTVAGGIKRDCAKEYTKQRNYSTLNCLQNWIL*TSARRQDCYIDI 741
            +FGDS+ + GNNN L+ + A+ +FP YG DF GG ATGRF+NG+   DI++ +LG+      YL  +   +  L+G+N+ASGG G    T           DQ+  FK+  + +RA +G+   N+    + + + +GSND  NN+    +    QY    + +LL       L  IY LGAR++   G   LGC+PS R               K +    LN +  W+L  ++R +   ID+
Sbjct:   30 IFGDSLTEVGNNNFLQYSLARADFPYYGVDFSGGKATGRFTNGRTIGDIISTKLGILS-PPPYLSLSQNDDAFLSGINYASGGAGILNETGIYFIQRLTFNDQINCFKKTKEVIRAKIGDGAANKHVNDAMYFIGLGSNDYVNNFLQPFMADGQQYTHDEFVELLTSTLHNQLTTIYKLGARKVIFHGLGPLGCIPSQR--------------VKSKTRMCLNRVNEWVLEFNSRTKKLLIDL 257          
BLAST of FC923161 vs. ExPASy Swiss-Prot
Match: GDL31_ARATH (GDSL esterase/lipase At1g74460 OS=Arabidopsis thaliana GN=At1g74460 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.884e-28
Identity = 73/203 (35.96%), Postives = 118/203 (58.13%), Query Frame = 1
Query:   19 VFGDSIVDTGNNNNL-KTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLL-TGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEEGKNRIFERSFFLVVVGSNDINNNYFGSRIR-RLQYDISTYTDLLVGHASTFLKEIYGLGARRIGVFGAPTLGCLPSTRTVA 618
            +FGDS+ D GNN NL ++ A  N P YG DF  G   GRF+NG+  SDI+ +++G+    +A+LDP++  + +L  GVN+ASGG G    T            Q++LF+   D + A +G++  ++ F+ + ++V +GSND  NNY         +Y+  T+ D L+    + LK ++ LGAR++ VFG   +GC+P  R ++
Sbjct:   26 IFGDSLSDVGNNKNLPRSLATANLPFYGIDFGNGLPNGRFTNGRTVSDIIGDKIGLPR-PVAFLDPSMNEDVILENGVNYASGGGGILNETGGYFIQRFSLWKQIELFQGTQDVVVAKIGKKEADKFFQDARYVVALGSNDFINNYLMPVYSDSWKYNDQTFVDYLMETLESQLKVLHSLGARKLMVFGLGPMGCIPLQRALS 227          
BLAST of FC923161 vs. ExPASy Swiss-Prot
Match: GDL81_ARATH (GDSL esterase/lipase At5g41890 OS=Arabidopsis thaliana GN=At5g41890 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.920e-28
Identity = 72/204 (35.29%), Postives = 105/204 (51.47%), Query Frame = 1
Query:   19 VFGDSIVDTGNNNNLKTPAKCNFPPYGRDF--EGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEEGKNRIFERSFFLVVVGSNDINNNYFGSRIRRLQYD---ISTYTDLLVGHASTFLKEIYGLGARRIGVFGAPTLGCLPSTRTV 615
            +FGDS+VD GNNN + T +K +  PYG DF    G  TGRF+NG+  SDI+ E LG K     YL+P  +   +  G+N+ASG  G    T           +Q+  F++  + +  ++GE G   + + + F + +GSNDI  NY    I     D        D +V H +T LK ++ LG R+  V G   LGC+P  R +
Sbjct:   28 IFGDSLVDVGNNNYIFTLSKADSSPYGIDFAPSNGQPTGRFTNGRTISDIVGEALGAKSPPPPYLEPNTEANTIRNGINYASGAAGILDDTGLLFIGRVPLREQVSNFEKSREYMVRVIGENGTKEMLKNAMFTITIGSNDI-LNYIQPSIPFFSQDKLPTDVLQDSMVLHLTTHLKRLHQLGGRKFVVVGVGPLGCIPFARAL 230          
BLAST of FC923161 vs. ExPASy Swiss-Prot
Match: GDL38_ARATH (GDSL esterase/lipase At2g23540 OS=Arabidopsis thaliana GN=At2g23540 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.432e-27
Identity = 77/230 (33.48%), Postives = 116/230 (50.43%), Query Frame = 1
Query:    4 VSAVIVFGDSIVDTGNNNNLKTPAKCNFPPYGRDFE--GGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVG-EEGKNRIFERSFFLVVVGSNDINNNYF------GSRIRRLQYDISTYTDLLVGHASTFLKEIYGLGARRIGVFGAPTLGCLPSTRTVAGGIKRDCAKEYTKQRN 666
            + A  +FGDS+VD GNNN L T ++ N  P G DF+  GG  TGRF+NG+   DI+ EELG    ++ +L P  K + LL GVN+ASGG G    T R          Q+  F     +   ++G E+ K+ I ++S F + +G+ND  NNY       G+R  +   D   +   ++ H    L  +Y L AR+  +     +GC+P  +T+    + +C     K  N
Sbjct:   46 LGASFIFGDSLVDAGNNNYLSTLSRANMKPNGIDFKASGGTPTGRFTNGRTIGDIVGEELGSANYAIPFLAPDAKGKALLAGVNYASGGGGIMNATGRIFVNRLGMDVQVDFFNTTRKQFDDLLGKEKAKDYIAKKSIFSITIGANDFLNNYLFPLLSVGTRFTQTPDD---FIGDMLEHLRDQLTRLYQLDARKFVIGNVGPIGCIPYQKTINQLDENECVDLANKLAN 272          
BLAST of FC923161 vs. ExPASy Swiss-Prot
Match: GDL36_ARATH (GDSL esterase/lipase At2g19050 OS=Arabidopsis thaliana GN=At2g19050 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.432e-27
Identity = 83/222 (37.39%), Postives = 111/222 (50.00%), Query Frame = 1
Query:    4 VSAVIVFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDP--TLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEEGKNRIFERSFFLVVVGSNDINNNYF--GSRIRRLQYDISTYTDLLVGHASTFLKEIYGLGARRIGVFGAPTLGCLPSTRTVAGGIKRDCAKEYTK 657
            V    VFGDS+ D GNNN L T AK N+ PYG DF  G  TGRFSNG+   DI+AE +   +    Y+ P     PE    G+N+ASGG G    T++          Q++  +  I  + A V EE  N    +  + + +GSND  NNYF     +   ++    Y D L+    ++LK +Y LGAR++ VFG   LGC P      GG    CA E  K
Sbjct:   29 VPCYFVFGDSVFDNGNNNVLNTSAKVNYSPYGIDFARG-PTGRFSNGRNIPDIIAELMRFSD----YIPPFTGASPEQAHIGINYASGGGGIREETSQHLGEIISFKKQIKNHRSMI--MTAKVPEEKLN----KCLYTINIGSNDYLNNYFMPAPYMTNKKFSFDEYADSLIRSYRSYLKSLYVLGARKVAVFGVSKLGCTPRMIASHGG-GNGCAAEVNK 238          
BLAST of FC923161 vs. ExPASy Swiss-Prot
Match: GDL35_ARATH (GDSL esterase/lipase At2g19010 OS=Arabidopsis thaliana GN=At2g19010 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.432e-27
Identity = 76/196 (38.78%), Postives = 103/196 (52.55%), Query Frame = 1
Query:   19 VFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEEGKNRIFERSFFLVVVGSNDINNNYFGSR--IRRLQYDISTYTDLLVGHASTFLKEIYGLGARRIGVFGAPTLGCLP 600
            VFGDS+ D GNNNNLK+ AK NF PYG DF  G  TGRFSNG+   DI+ E  G K+    + + +  PE   TG+N+ASGG G    T+           QLQ  K  I K              ++  +++ +GSND  NNYF S+    + +Y    Y   L+    + LK ++ LGAR++ VFG   +GC P
Sbjct:   29 VFGDSMSDNGNNNNLKSEAKVNFSPYGNDFPKG-PTGRFSNGRTIPDIIGELSGFKDFIPPFAEAS--PEQAHTGMNYASGGSGLREETSEHLGDRISIRKQLQNHKTSITKANVPAER------LQQCLYMINIGSNDYINNYFMSKPYNTKRRYTPKQYAYSLIIIYRSHLKNLHRLGARKVAVFGLSQIGCTP 215          
The following BLAST results are available for this feature:
BLAST of FC923161 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
GDL75_ARATH1.059e-3035.51GDSL esterase/lipase At5g08460 OS=Arabidopsis thal... [more]
GDL64_ARATH3.082e-3037.16GDSL esterase/lipase At4g16230 OS=Arabidopsis thal... [more]
GDL58_ARATH3.082e-3037.14GDSL esterase/lipase At3g50400 OS=Arabidopsis thal... [more]
LTL1_ARATH4.025e-3038.12GDSL esterase/lipase LTL1 OS=Arabidopsis thaliana ... [more]
GDL80_ARATH7.591e-2932.92GDSL esterase/lipase At5g37690 OS=Arabidopsis thal... [more]
GDL31_ARATH2.884e-2835.96GDSL esterase/lipase At1g74460 OS=Arabidopsis thal... [more]
GDL81_ARATH4.920e-2835.29GDSL esterase/lipase At5g41890 OS=Arabidopsis thal... [more]
GDL38_ARATH1.432e-2733.48GDSL esterase/lipase At2g23540 OS=Arabidopsis thal... [more]
GDL36_ARATH1.432e-2737.39GDSL esterase/lipase At2g19050 OS=Arabidopsis thal... [more]
GDL35_ARATH1.432e-2738.78GDSL esterase/lipase At2g19010 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionC31701G04EF StrClemenN Citrus clementina cDNA clone C31701G04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923161 ID=FC923161; Name=FC923161; organism=Citrus clementina; type=EST; length=741bp
ACTGTTTCAGCAGTTATTGTATTTGGAGATTCAATCGTTGATACAGGCAA
TAACAATAATCTGAAAACGCCGGCTAAATGTAATTTTCCTCCTTATGGGA
GAGATTTCGAGGGAGGAGCGGCAACTGGCAGATTTTCTAATGGAAAGGTC
CCCTCAGACATTTTAGCGGAAGAATTGGGCGTAAAAGAGCTTTCGCTAGC
ATATCTGGATCCAACTCTGAAACCTGAAGATCTTCTCACAGGTGTAAACT
TTGCTTCCGGTGGCTGTGGATACGATCCTTTGACCACAAGACTTTCGGCA
GCAGCTTTATCATTATCTGATCAGCTCCAACTGTTCAAGGAATATATAGA
CAAGCTGAGAGCGATTGTTGGAGAAGAAGGCAAAAACAGAATCTTTGAAA
GAAGTTTTTTTTTGGTGGTAGTAGGAAGCAATGACATAAACAACAACTAT
TTTGGTAGCCGCATTAGGAGATTACAGTATGATATTTCTACTTACACGGA
CCTTCTAGTTGGACATGCTTCAACGTTCCTTAAGGAAATATATGGCCTTG
GGGCACGAAGGATTGGAGTGTTCGGTGCACCGACGCTTGGCTGTTTACCG
TCAACAAGAACGGTGGCGGGAGGGATAAAGAGAGATTGTGCNAAAGAATA
CACGAAGCAGCGCAATTATTCAACTCTAAATTGTCTGCAGAACTGGATTC
TCTGAACATCTGCCAGACGTCAGGATTGTTACATTGATATC
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